Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <                                                                                                    -                                                                                                    x                                                                                               ------                                                 <---------YAB1                             <--------                                           <----------DOF2                                 xxxxxxxxxx               --------->WOX13(1)          <---------DAG2        ----------->GT1  --------->YAB1    < ----------HVH21  --------->YAB1      --------->YAB1  <---------AHL20(2)      <---------AHL20(2)   <x >ZmHOX2a(2) <---------ATHB12        <---------YAB1   --------->AHL20(2)----------->GT1 <xxxxxxxxxxxx   atgtcaattctaaaaatcattcacaatctctctattcttatgatactttttatgattttattttgtgaagaaaaatgtataaaatcataaaccaataaca  26427100              --------->YAB1           --------->TOE2(3)          <---------ICU4          --------->ATHB12     <---------AHL20(2)     --------->AHL20(2) <---------AHL20(2)   ------>ZmHOX2a(1) --------->AHL20(2) --------->YAB1 <---------ICU4    <<<<<<<<<ARR1 --------->ATHB51  <<<<<<<<<ARR2 <--------ATHB1    <<<<<<<<<ARR1 ---------ATHB12   <<<<<<<<<ARR2 -------->ICU4<-----------GT1 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) --->ZAT6 --------->YAB1 -ATHB12 <---------ATHB12               --------->AHL20(2) xxxxxxxxxxxx>smallRNA(si3)            <---------WOX13(1)         <---------ZAT14                ---- ---------ATHB51--------->MYB46(3)  <---------YAB1   --------->AHL20(2)---------->DOF2           <--- xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)<---------AHL20(2)           <----------DOF2                ----- xxxxxxxxxxsmallRNA(si3)    <----------DOF2    --------->ZAT6<---------ATHB12         <---------ATHB12   caataatttaaatcattaacaatcctaatacttttgttttaattgaataacacaaaaaattcaatgactttactaaagtatgaattcaataactccaaat  26427200                                                          --------->TOE2(3)                                                          --------->YAB1                                                          --------->TOE1(3)                                                       --------->YAB1                                                    --------->YAB1                                                   <---------YAB1                                                  <---------AHL20(2)                                                  --------->AHL20(2)      --------->AHL20(2)          <---------TOE2(3)                  <---------AHL20(2)          <---------WOX13(1)     <---------ARR11(3)                      <---------AHL20(1)       <---------YAB1               --     --------->ARR11(3)                      --------->AHL20(2)     --------->TOE2(3)          ------ ----->AHL20(2)                             --------->AHL20(2)      --------->YAB1     <---------GLK1(2) ------AHL20(2)             --------->YAB1--------->TOE1(3)        <<<<<<<<<ARR1      -------->HAHB4< ---->AHL20(2)       <-----------GT1      --------->TOE2(3)        <<<<<<<<<ARR2     <---------ATHB12   ttataaagattttagattacattttacaaatcagaaactaataacattaaattttaataatcttaaacaatcttaattgaataacaaatgattcttccta  26427300           --------->AHL20(2)          <---------YAB1         --------->TOE2(3)        <---------ICU4        --------->YAB1        --------->ATHB12       <---------ATHB12   <---------YAB1                                                                           --------- --------->YAB1                                                                           <---------ATHB12 ------->AHL20(2)      <---------AHL20(2)                                                 --------->ICU4 >ZmHOX2a(1)--------->YAB1                                                   <---------HSFC1(2) ---------YAB1         --------->AHL20(2)   <-------TEIL------->TEIL         --------->HSFC1(2)<-----   atattataaatcattaaaaatccatataaatcacaaaccaataacatccataagtttgaacgtgactaagaccaatagatgtttccattggaatcattca  26427400                                                                        ------>NtERF2                                                                        ----------->RAV1(1)                                                                     ------>NtERF2                                                                     --------->LBD16                                                                    --------->ANAC58                                                                    --------->ANAC58                                                                    --------->ANAC46                                                        <---------MYB55(2)                                         --------->ANAC58           ------->GAMYB--------->ANAC58                                         --------->ANAC55(1)       --------->MYB46(3)                                         <---------ANAC55(2)       <---------MYB55(2)                                         --------->AtLEC2      ----------->HVH21 --------->ANAC58   <-----------GT1    ----------->GT1    --------->ANAC58     <-----------HVH21  --------->ANAC46 >WOX13(1)    <---------AHL20(2)         --------->ANAC46------->GAMYB --------->DEAR3(1) --------->DEAR3(1) ------GT1    --------->AHL20(2)  ---------->DOF2       --------->MYB46(3)  --------->ANAC46       <-   ccatttttcttcttaattaaaaactagaaaattgacaaaagacacgcaaacgattccaacgacctctcacccgccaacacaaaacgcaaacgcagacctc  26427500      --------->ARR11(3)      <---------ARR11(3)     <---------CCA1(2)                 <-----------GT1                                             <- <---------AHL20(2)                  <----------DOF2                                              --- --------->AHL20(2)            --------->MYB52(1)                                             ------- <-----------TBP   <-----------GT1   *TSS                                              ------>ZmHOX2a(1) ----------TBP  <---------AHL20(2)   <---------DAG2   <----------DOF2         <---------GLK1(2)------   gatttatatatcttatatttaaaaccatcttctaaacggctttacctgttttttagctttaatctctcttctctctctcaaattctctcctaaaatccta  26427600                                        <------NtERF2                                       <---------MYB46(3)                                          <-                                       <---------ATERF1(1)                                         --                             <---------------AGL15                                             <-----  <-----------GT1            <----------DOF2                                               ---------- --------ICU4        <----------DOF2  <---------DEAR3(1)                                  <---------- ------>ICU4      <-----------GT1   <---------ANAC58       --------->MYB46(3)    <---------ANAC46  <- -->TOE2(3)      ---------->ID1     <---------ANAC58    ---------->DOF2         <---------LBD16<----- >ZmHOX2a(1) <---------MYB52(1)    <---------MYB46(3) --------->LBD16    <---------ANAC46<-----------GT1   aatattaccttctccatttgtttcttttcttcttttttgggtggctacctataatccgaaaaccaccatgaggttttgtgttttcgggtttttatcgctt  26427700                                                                            ------->MYC4                                                                            ------->MYC3                                                                            <-------MYC4                                                                            <-------MYC3                                                                            ------->MYC2                                                                            <-------MYC2                                                                           --------->TGA1a                                                                           <---------ANAC55(2)                                                                           <---------TGA1a                                                                           --------->ANAC55(2)                                                               --------->ANAC55(2)                                                       --------->DEAR3(1)  --------->O2                                                   --------->MYB46(3)      <---------O2                     ------>NtERF2                 <---------ABI4(2)       ==========================    <---------WOX13(1)----------->RAV1(2)         --------->SPL7        --------->ZAT14  --------->ATHB12  --------->DEAR3(1)           <---------ARR14(2)     <---------ZAT14 <---------YAB1     <---------ALFIN1            <---------SPL7 --------->ANAC58 --------ANAC58    --------->ATERF1(1)          --------->At5g28300     <---------REM1(2)   <-------- ------------------->WRI1  --------->ARR14(2)--------->LBD16   --------->ANAC55(1)       --------->ANAC58 ----DAG2         <---------ATERF1(1)        <---------LBD16   <---------ANAC55(2)       --------->ANAC58 >ID1         ------>ZmHOX2a(1)             --------->DEAR3(1) --------->ANAC58     --------->HSFB2a(2) -GT1       ----------->RAV1(2)          <---------ALFIN1      --------->ANAC46     <---------HSFB2a(2) --------ANAC58   ------>NtERF2   <---------MYB59--------->ARR14(2)   --------->ANAC46----------->HVH21 -----DOF2  <---------At4g35610  --------->HSFB2a(2)<---------ALFIN1--------->ZAT6 <---------LBD16   ttcttgattgtttctcctgcctccgcctggttcttccctaactccaccgcggtaccaccgtctctacgtaacactacacgtgttttctgggacgctttct  26427800                                                                                               ------                   --------->ANAC58                                                           -------                 <---------ALFIN1                                                             <------                <---------REM1(2)                                                            <-------            <-----------HVH21                                                                <-------      <---------LBD16                                                             ----------->HVH21    <-----------GT1--------->ANAC58                                               --------->LBD16 ==bZIP_DOF<---------MYB46(3)                       --------->AHL20(2) <---------MYB46(3)   <-------- --DOF2  <---------MYB52(1)  --------->TOE2(3)<---------ARR14(1)<---------TOE1(2)--------->LBD16   ccaatttcaccggttgtcaccacggccaaaacgttgatggtctctaccgtatcaaaaaatacttccaacgttttggttacatccctgaaacgttttcggg  26427900                            ---------->DOF2                          ------>ZmHOX2a(1)                         --------->TOE1(3)                      --------->ARR14(2)                      --------->ARR11(3)                      <---------ARR11(3)                                     <---------MYB52(1)                      <---------ARR14(2)                                 --------->MYB52(1)                     <---------GLK1(1)                                   <---------DOF5.7(2)   <-----------GT1   --------->GLK1(1)                                 --------->DOF5.7(2) --->LBD16          <---------ARR11(3)                              <---------TOE1(3) -->HSFB2a(2)       --------->ARR11(3)                             <-----------GT1 ---HSFB2a(2)     <---------YAB1                                --------->YAB1 --LBD16       <---------YAB1     --------->At4g35610           --------->TOE1(3) --ANAC46  --------->ARR11(3)     <---------At4g35610           --------->TOE2(3)--------->At4g35610 -LBD16  <---------ATHB12--------->TOE2(3)              ------->TEIL<---------TOE2(3)          <-----   aaatttcaccgatgattttgatgatatcctcaaagccgctgtcgaattgtatcagacgaatttcaatcttaacgttaccggtgagcttgatgcgcttacc  26428000  Previous    Next  AGI:  At1g70170.1    Description:  MMP (MATRIX METALLOPROTEINASE); metalloendopeptidase. similar to matrixin family protein [Arabidopsis thaliana] (TAIR:AT1G24140.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN76268.1); contains InterPro domain Peptidase M10A and M12B, matrixin and adamalysin; (InterPro:IPR001818); contains InterPro domain Peptidase, metallopeptidases; (InterPro:IPR006026); contains InterPro domain Peptidoglycan binding-like; (InterPro:IPR002477) Range:  from: 26427537    to: 26429019    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version