Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                    --------->At4g35610                                                                                  <---------ANAC46                                                                                --------->ZAT18                                                                             --------->MYB52(2)                                                                           <---------MYB52(1)                                                                         <----------DOF2                                                                         <---------MYB46(3)                                                                  --------->CCA1(2)                                                                 <---------ARR11(3)           -------                                                                 --------->ARR11(3)           -------                                             <-----------GT1     --------->ARR11(1)           -------       --------->ARR11(3)               --------->AHL20(2)       --------->ARR14(2)         <-------GAMYB       <---------ARR11(3)         --------->ANAC58               <---------ARR14(2)    --------->ARR14(2)   ---------->DOF2             --------->WRKY18(1)             ----------->ARR10<---------ZAT18<----- ----->DOF2       <----------DOF2 --------->ANAC58        --------->ANAC46<-------GAMYB<---------ARR14(2)   aagttcaaagaactcatcttcttttttttttgggtcaagacataaaataactcatcttaaacggcaagatttgggctgttagtgggctggattgggttga  26406400                  --------->ANAC55(2)                  <---------ANAC55(2)    ----------->GT1    --------->ANAC55(2)                                                                             <    <---------ANAC55(2)                                        --------->TOE2(3)                   -- <---------MYB52(1)       ------>ZmHOX2a(1)                   ----------->GT1                      -- -->WRKY12       ------->TEIL                            --------->YAB1                         <---- ---->HVH21  <---------------AtSPL3                --------->TOE2(3)                            ----- -->WRKY38(1)--------------->AtSPL8     <----------DOF2 <---------YAB1                        <------ZmHOX2a(1) ----WRKY18(1)   <-------TEIL           <---------DAG2--------->YAB1                 ----------->GT1<   cctgttaagtaatacgatgtacgtattcctcgtttctaaatgctttttgaaaacgataatgaaaatgttaaatcacacattagaaatttgtgaaaaggat  26406500   <---------ARR14(2)   --------->ARR14(2)   --------->SPL7   ------->TEIL <---------SPL7                                                           <---------WOX13(1) ---------ANAC58                                                         >>>>>>>>>ARR2 ------------->AtSPL3                                                <----------DOF2 ------------->AtSPL8                        ---------->DOF2  --------->TOE1(2) -----GLK1(1)                            ----------->GT1     <---------HSFB2a(1)<---------YAB1 ---->GLK1(1)                       --------->YAB1          ------->TEIL--------->ATHB12 ---------ANAC58  <---------TOE2(3)<-------TEIL        ---------->DOF2 <---------YAB1             <--   gtccgtacctgcattggtttaatgtttgtatatgacattcatatagtaaaagaatgtgaaagtaccttcgactttgattgttatcaatatcgactatttt  26406600                                               --------->LBD16                                              --------->DEAR3(1)                   -------->P                                              --------->ANAC46                    <-----------GT1                               --------->YAB1<------NtERF2                      <---------ANAC58                --------->At4g35610  <----------DOF2                            <---------ANAC58                <-------GAMYB  -------->HAHB4<---------LBD16  --------------->AtSPL8        --------->TOE2(3)      --------->ATHB51------>NtERF2  <---------------AtSPL8    --------->YAB1      ----------->GT1     <---------ATERF1(1)          <----------DOF2        ----- ---------GT1  ----------->GT1 <---------ICU4--------->ATERF1(1)      <---------ALFIN1      <--------   taactatcaacattagtcagttaaactagttaataatcgcttttgtccccgcctaatagtttagttagtacaacactttcttacttaccatcttccgaca  26406700                                               =============================HOX2a_HOX2a                                              --------->GLK1(1)                                          ==================================HOX2a_HOX2a*TSS                                         <---------At4g35610                         --------->ARR14(2)    <---------ALFIN1                <---------At4g35610                              --------->GLK1(2)  >>>>>>>>>>>>>>>>>LFY             ------->TEIL------>ZmHOX2a(2)                     <---------ARR14(2) <---------TCP15(1)                <---------ARR14(2)                               <---------CCA1(2) --------->PCF2                    --------->ARR14(2)                           --------->ANAC58 ----->DOF2                 <---------YAB1------>ZmHOX2a(2)<----------DOF2      --------->ANAC58 -ETT(1)        ---------->ID1    <---------CCA1(2)   <<<<<<<<<TBF1  ------>ZmHOX2a(1) <-------------   aaggtcccactgtctcttgtcttcattctcatccttgtatctgatctgatctcttcttcttctttttcttcctctctctctcactcaaatctgtaattgg  26406800                                                  <----------DOF2                                                ------>ZmHOX2a(1)                                           <------MYB46(1)                                         --                                           <------MYB83                                            --                                       --------->ATHB12                                            <-                         ------>ZmHOX2a(1)--------->MYB59            ---------->DOF2               <-  <-----------GT1 --------->MYB46(3)<---------ANAC58             ------>ZmHOX2a(1)         ------->TEIL ----AGL3       <-----------GT1     <---------ANAC58         <-----------GT1     <----------DOF2  <--   gatttttcgacccaaaattaacaactccttataagttttcttgataggtcctctttgtgtttttttcctcacaaagtttccaactttgaaatgtatttgt  26406900                                      <---------HSFB2a(2)                                   <---------YAB1                                 <---------ICU4                               --------->ANAC55(2)                              --------->YAB1                           <----------DOF2                              <--------HAHB4              --------->ZAT18    <---------TOE2(3)                              <---------ICU4              <---------ZAT18    <---------TOE1(3) ------->ARR14(2)            <---------ATHB12          <---------ANAC46--------------->AGL15 ----->TEIL<-----------GT1   --------->ICU4            <---------ANAC58<---------DAG2 --------ARR14(2)          --------->WOX13(1)          <---------ANAC58<---------------AGL15 ----------ARR10 <----------DOF2--------->ICU4         <-----------RAV1(1)  <-----------RAV1(2)  ---- -------CCA1(2)  <---------DAG2 <---------YAB1 --------->ZAT6    --------->YAB1              <-------   gaatcttcacttgttactactttttgtgtccatcattattttggaagtaacacaattgtgtgggctatcttcactttttcaggtaatcttacaagattgc  26407000                                                                                                    <                                                                                                    <                                                                  <---------YAB1                    -                                                                --------->YAB1                      <                                                            -------->ATHB1                          -                                                            --------->YAB1                          -                                                            --------->ATHB12                       <-         <----------DOF2                    <---------DAG2  --------->ATHB51                       --    --------->GLK1(2)                       <----------DOF2 <--------ATHB1                         <-   --------->ARR14(2)                 --------->YAB1        <---------ICU4                         <-   <---------GLK1(2)                  -------->HAHB4       --------->ICU4                       -----   <---------ARR14(2)           --------->YAB1             <---------ATHB12                     <---- ----------->ARR10    <----------DOF2 <---------ICU4     --------->WOX13(1)               <---------ANAC58 ----->ZAT6         ---------->ID1   <---------YAB1     ------------>ATHB5            <----------DOF2 --WOX13(1)        <-----------GT1   --------->ICU4  <---------ZAT6         ---------->ID1<---------ANAC58   cactagattctcttttttgtttttctttttggaattgtaatgataacttttcttagtgtcaatcattgatgagtgtttggctctctctctttgcttattc  26407100         --------->ZAT18         <---------ZAT18       --------->At4g35610       <---------At4g35610 --------ATHB1 ---------ICU4 -------->ATHB51 ------------ATHB5 ------->ATHB1 -------->ATHB12                          <---------ARR14(2) --------YAB1                             --------->GLK1(2) ------->ICU4                             --------->ARR14(2) --------ATHB51               --------->AHL20(2)                  ----------->GT1                  <- --------ATHB12               <---------AHL20(2)    <---------At4g35610                         <---- ------->ATHB5              <---------AHL20(2)      --------->At4g35610                        ------ -----AHL20(2)       ----------->GT1     <---------GLK1(2)     ----------->GT1                 <-----   aattattgaagctcactctcaattagttatatttttttaagaagaatctgagtttgctcaccaagaggttgaaaaatgctgaagttgaaagtgtctatta  26407200                                           <---------ICU4                                           --------->YAB1                                           -------->ATHB1                            ------>ZmHOX2a(1) ----------GT1           <-----------GT1  <---------ATHB51                 ----------->GT1        --- -----ICU4 <---------ARR11(3)             <---------YAB1       <-----------------AGL3             <-- --->AHL20(2)           <-----------GT1   --------->ICU4      <---------At4g35610<---------AHL20(2) ----AHL20(2)--------->AHL20(2) <----------DOF2    <----------DOF2<---------YAB1 --------->AHL20(2)   attactaaaccaagattatatgtgtttttcctctctttactacaattattctgctttacagtgaagctactattggatgctaaaaaattggtatagtttt  26407300  Previous    Next  AGI:  At1g70100.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G24160.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40971.1) Range:  from: 26406787    to: 26409743    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version