Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100              --------->REM1(2)         <---------ANAC58         <---------ANAC58   <---------ANAC58                                              <---------DAG2   <---------ANAC58                   --------->At5g28300        <----------DOF2  --------->HSFC1(2)                 ----------->GT1          <-----------GT1  <---------HSFC1(2)                --------->MYB59        <----------DOF2 -----ZmHOX2a(1)              <---------------AGL15    --------->YAB1 --ZmHOX2a(1)                ----------------->AGL1   <------ZmHOX2a(2)                         -----   aggaagcttgtgcttgtagacttgtgtctctgcaaaattcggtaactctctctacgatcatcttttacttttttcgaagcgttttttttttttgtgtttc  26387100                    <---------MYB52(1)                   <---------RAP2.6(3)                  <---------ANAC46                  --------->RRTF1(3)                  --------->RAP2.3(3)                  --------->RRTF1(2)                                   --------->ATHB12                  --------->RAP2.3(2)                                <----------DOF2                 <------NtERF2                                 <-----------GT1                 --------->RAP2.3(1)                   <------ZmHOX2a(2)                --------->ZAT18                       <---------ARR11(3)           ---------->DOF2    <---------AHL20(2)      --------->ARR11(3)<------------CBF     --------     <---------CCA1(2) ----------->GT1        <---------ARR11(3)   <---------At4g35610      <-------- ---->TOE2(3)  --------->DEAR3(1)             --------->ARR11(3)   --------->At4g35610  <----------DOF2   ttaattcttatcttgaagcgccgtaatgtgaattaatctgaagattaagttcttaagatcgattttttctgcttcattgtttcttaaactcttttctcga  26387200                                   <----------DOF2          --------->KAN4(2) ------>ZmHOX2a(2)        <---------WOX13(1) <------ZmHOX2a(2)       <------------CBF   <---------ARR14(2)                     --------->AHL20(2)             <----      --------->ATHB12    --------->ARR14(2)                     --------->AHL20(1)            ------     <---------YAB1       <---------ARR11(3)                ------------>CBF<------------CBF<--------   <----------DOF2        --------->ARR11(3)      <---------ANAC58  <---------AHL20(1)      <--------  <---------ANAC58        <---------AGP1          <---------ANAC58  <---------AHL20(2)      <--------  <---------ANAC58        --------->AGP1          <---------ANAC46  --------->AHL20(2)--------->ATHB12 ->HSFB2a(2)         <---------STY1(2)        <------------CBF   <---------AHL20(1)<---------ANAC58 ---GT1>>>>>>>>>ARR2 --------->STY1(2)      <---------TOE2(3)    <---------ARR11(3)<---------ANAC58--   ttttgctttgattgttctctacttgctagatctactgctttagtttgagattgcttgcagagttcaatattttatttggattgtttcttgatttaagatt  26387300                                                          <------------CBF   <------ZmHOX2a(1)                                 <---------ANAC46        <-------TEIL       ----- ---TEIL     <---------AHL20(2)                      ----------->GT1<---------ANAC58           <----- --->CCA1(2)<---------YAB1                           <------MYB83   <---------AtLEC2   ------>ZmHOX2a(2) -YAB1 <---------AHL20(2)                            <------MYB46(1)<---------ANAC58 <---------ARR11(3) -TOE1(3)  <---------AHL20(2)                       --------->MYB111(2)   <---------At4g35610  <----- -TOE2(3)<---------YAB1   <------------CBF          --------->MYB46(2)    --------->At4g35610 <------ -------->DOF2    ------------>CBF           <----------DOF2        <---------ANAC46--------->ZAT14   caaaaggatttatttttattttcaatcgaattgcccaaattcaaagactttagtttggtgaattgagtttgcttggagatgcacagtgatctaatttgcg  26387400                                                                                                    <                                                                                                    -                                                                                                    -                                                                                                    <                                                          <------ZmHOX2a(1)                         <    <---------AHL20(2)                                <------MYB83--------->ZAT14                  <-    --------->AHL20(1)       --------->ARR11(3)       <------MYB46(1)                              <-    --------->AHL20(2)     ------->TEIL              --------->MYB111(2)                      <------ ---->LBD16            <---------TOE2(3)            <--------P    <---------ZAT14           ------->TEIL ----RAP2.6(2)     <-------GAMYB                  <---------MYB46(3)      --------->At4g35610 ------- ----ANAC46       <---------MYB46(3)              --------->ATHB12--------->ZAT18         <---------ZAT18 ---LBD16      <-----------RAV1(1)               <---------YAB1   <---------ZAT18     <---------ATHB12   gctaaattttttggtttctgtggttaatgaagctctggcaaaatataaaccatggttggaggaagtagtgcacagaagctaactacaaatgatgcacttg  26387500               <---------TOE2(3)           <-----------HVH21     ---------->DOF2  --------->TOE2(3) ---------ARR14(2)                                          <---------TOE1(3) -------->ARR14(2)                         --------->ARR14(2) -------->ARR11(3)                         <---------ARR14(2)     <---------YAB1 ---------ARR11(3)                   ----------->HVH21      <---------TOE2(3) ---------ARR11(1)                 --------->ANAC46     <---------ANAC58 --------CCA1(2)                   --------->ANAC55(2)  <---------ANAC58 --------GLK1(1) --------->YAB1   <-----------------------TaNAC69(2)         ---------->DOF2 -PIF5  <---------At4g35610    --------->CCA1(2)        <---------ANAC46--------->ARR11(3) >PIF5  --------->At4g35610   <---------ARR11(3)      --------->GLK1(2) <---------ARR11(3)         <-   catatcttaaagctgtcaaggataaatttcaagataaacgtgacaaatacgatgagtttcttgaggttatgaaagattttaaagctcagaggtattgttt  26387600            <---------AHL20(1)            --------->AHL20(2)            <---------AHL20(2)                  ------>ZmHOX2a(2)       <---------MYB52(1)                     --------->ARR11(3)                       --------->YAB1 --------->ZAT18         <----------DOF2      <---------ARR11(3)  <---------ZAT6       --------->TOE2(3) --------At4g35610  <-----------GT1     <---------GLK1(1)<---------YAB1          <---------ZAT6  ----   ttgctcactgttattttattttttgctctttagttcaatttgaaatctgatcttattttgtcattgtagagttgatactactggtgttatcttaagggtg  26387700                                                                                                   --                                                                                                   <-                                                                                                -----                                                                                               ------                                                                                            ------>MYB83                                                                                          --------->MYB46(3)                                                                                 --------->LBD16-----                                                      --------->MYB52(1)    ------>NtERF2 <---------MYB59         ---------->DOF2                             ---------->DOF2       --------->DEAR3(1) -------    <----------DOF2                            <---------ANAC58            <---------ETT(1) -------->P    <---------DAG2                             <---------ANAC58            ----------->HVH21------>MYB46(1) <---------ARR11(3)                         <----------DOF2           --------->ZAT6      --------->AtMYB61 --------->ARR11(3)                       <---------ICU4       <---------HSFB2a(2)     <---------WRKY18(1) ------>DOF2<---------------AtSPL8       <-----------GT1       --------->HSFB2a(2)  <------ZmHOX2a(1)   aaagaactttttaaagggaacagagaattgattttggggtttaatactttcttaccaaagggtttcgagataactctccgacccgaggatgaccaacccg  26387800                                                                                     <----------DOF2    ---------->DOF2                                                                  <---------DAG2 ----------->RAV1(1)                                                           --------->ARR14(2) ------->ZAT14                                                                 <---------ARR14(2) --------ZAT14                                                                <---------GLK1(1) ---->At4g35610             --------->ANAC58                               <-------TEIL --->ANAC46               <------ZmHOX2a(1)                      --------->AHL20(2) <---------DAG2 ---->LBD16             <---------TOE2(3)             <---------TOE1(3)    <---------ZAT18 >GAMYB       <-------GAMYB --------->ANAC58          <---------TOE2(3)<-----------RAV1(1)<----------   ctgcaccaaagaagcctgttgagtttgaggaagctattagttttgttaacaagattaaggtagaagattatatatggtgcatttcccctttttttcttct  26387900                                                              --------->REM1(2)                                  --------->At4g35610        <---------ANAC46                        --------->YAB1                     ------>ZmHOX2a(2)                       <---------YAB1                    --------->ARR11(3)         <---------ANAC58         <---------At4g35610  <---------YAB1 -GT1    <---------ANAC58   <---------AHL20(2)         --------->ICU4                               -   cttgctacttggcttcttaactactatcattttatctgcagacaaggtttcaaggcgatgatcgtgtatacaaatcgtttttagacattttgaacatgta  26388000  Previous    Next  AGI:  At1g70060.1    Description:  paired amphipathic helix repeat-containing protein. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G01320.1); similar to ATSIN3/SIN3 (Arabidopsis thaliana sin3 homolog) [Arabidopsis thaliana] (TAIR:AT1G24190.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G15020.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40976.1); similar to hypothetical protein OsJ_000071 [Oryza sativa (japonica cultivar-group)] (GB:EAZ10246.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14871.1); contains InterPro domain Histone deacetylase interacting (InterPro:IPR013194); contains InterPro domain Paired amphip Range:  from: 26387452    to: 26393579    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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