Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                            <---------AHL20(2)                                          <---------AHL20(1)             <-----------GT1              --------->ARR11(3)          <----------DOF2     <-----------GT1               <---------DAG2       --------->ARR11(3)  --------->HSFB2a(2)              <----------DOF2       <---------ARR11(3)  <---------HSFB2a(2)----------->GT1   ---------->DOF2 <---------DAG2    --------->AHL20(2)  <-----------GT1                 ----------->GT1 ------ZmHOX2a(1)  <----------DOF2 <----------DOF2  <---------AHL20(2)        <----------DOF2      <-   taggataaagaacttttacaactttttttctataacccttttaatatatggtttttattttactttatttgtctaaatttcttttctaatacagttacaa  26384500                                                                   <---------WOX13(1)     <---------ZAT6                                                                <---------AHL20(2)   <xxxxxxxxxxxxxxx                   <---------AHL20(2)               <---------GLK1(1)               --------->YAB1             --------->TOE1(3)                      --------->GLK1(1)         <xxxxxxxxxxxxxxxxxxxxxx             --------->TOE2(3)        --------->AHL20(2)        --------->AHL20(2) <---------ATHB12             --------->YAB1           xxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)  <-----------RAV1(1)        <---------AHL20(2)          <---------ARR11(3)      --------->ATHB12 ---------->ID1      <---------AHL20(2)      <----------DOF2  ----------->GT1 --------->AHL20(2)--------->WOX13(1) ---------DOF2     <---------ICU4   --------->ARR11(3)     <---------YAB1  <---------MYB46(3)   acttttatatttttatcttaaatatttcaaaacttttagattttatacatggtgaaatctgatgatttaattgatatttgttgcaatcacgagagttagc  26384600                                         <---------AHL20(2)                               <----------                                         --------->AHL20(2)                              -------->ATHB1                                        --------->AHL20(2)                               --------->ATHB51                                        --------->AHL20(1)                               <---------ICU4                                        <---------AHL20(1)                               <---------AHL20(2)                                 <------ZmHOX2a(1)                                       -------->HAHB4                                 ----------->GT1                                         --------->ATHB12                               <---------ANAC46                                         <---------ATHB51                          --------->CCA1(2)                                             --------->ICU4         <------------CBF--------->ARR14(2)                                          <---------AHL20(2)       --------->ICU4    --------->ARR11(3)                                          --------->AHL20(2)       <---------YAB1    <---------ARR11(3)             ----------->GT1            <---------ANAC55(2)    <---------TOE2(3)    --------->ARR11(1)       ---------->DOF2    --------->AHL20(2) <---------YAB1 xsmallRNA(i)            <---------ARR14(2)  <---------AHL20(2)  ----------->GT1   --------->ANAC55(2) xsmallRNA(si3)        ----------->ARR10<---------AHL20(2)----------->GT1    --------->AHL20(2)   aagtttgagattattgttttgaaataagatatggaggataaatttattttaaaaaagagagagaaaaatgaaaaaataagaaaatacttaattattgttt  26384700               <---------AHL20(2)                                           <---------TOE1(3)               --------->AHL20(2)                                           <---------TOE2(3)           <---------AHL20(1)                --------->YAB1                <---------DOF5.7(2)           <---------AHL20(2)              --------->AHL20(2)    <---------ANAC55(2)                <           --------->AHL20(2)              <---------AHL20(2)    <---------TOE2(3)                <--           --------->AHL20(1)  --------->TOE2(3)               --------->AHL20(2)                ----       --------->AHL20(2)      <----------DOF2             --------->AHL20(2)                    <---     --------->TOE2(3)      <---------ARR11(3)             <---------YAB1  ---------->DOF2       <---     <----------DOF2        --------->ARR11(3)  <-----------GT1<---------AHL20(2)      --------->TOE2(3) --CBF <---------AHL20(2)  <---------CCA1(2)<---------YAB1 <---------AHL20(2)   <-------TEIL <-------   tgaaatactttaattaattaaaaacaactatatctttaactaaattttaataacatatcatataattaagtataggttaaagttcattttcttaaaaatt  26384800     ------>ZmHOX2a(1)    --------->TOE2(3)    --------->TOE1(3)     <-----------GT1        --------->ANAC46                --------->WOX13(1) ----------DOF2     <---------YAB1               --------->ANAC58              <---------ATHB12 -------YAB1       <----------DOF2               --------->ANAC58              ------------>CBF ----->ARR11(3) <---------ARR11(3)            <---------ZAT18                --------->WOX13(1) --------GT1    --------->ARR11(3)        <----------DOF2                  ------------>CBF       --- ------ARR11(3)<---------CCA1(2)    <---------At4g35610             <---------CCA1(2)  -------------- --ICU4  --------->MYB46(3)         --------->At4g35610          ------>ZmHOX2a(1) <---------ATHB12   atctttccttaacaactatatctttattaaactgtctcatcttccttttgcactccaaaatagtttcctcgtttctcttcaatcaatcacttagaatggc  26384900                                <---------MYB52(1)                           ------>ZmHOX2a(2)                          <---------GLK1(1)                          --------->GLK1(1)                          --------->HSFB2a(1)                          <------ZmHOX2a(2)                          <---------HSFB2a(1)                         --------->ARR14(2)                         <---------ARR11(3)                         <-----------ARR10                         <---------ARR11(1)                         --------->ARR14(3)                         <---------ARR14(3)                         <---------ARR14(2)                         --------->ARR11(3)                        <---------CCA1(2)                     --------->ZAT18                     <---------LBD16                     <---------ZAT18                    --------->ALFIN1     <---------YAB1                                   --------->GLK1(2)                 <------ZmHOX2a(1)  <----------DOF2                               ---------->DOF2     <---------ARR11(3) <---------ARR14(1)                                      <---------YAB1 ------>At4g35610=================HOX2a_HOX2a                                 --------->YAB1        < ->AGL15         ================HOX2a_HOX2a                                 <---------YAB1         -   agacgaagaactatctataggagtgcggatcttcgtttcttttctcatagcctttggtatttgtggtctggttttgttgatgataaaagacaattctggc  26385000                                                                                                  ---                                                                                                  ===          ----------->GT1                         <---------ICU4                                 ====         <------NtERF2                           <---------AHL20(1)                              <---         ----------------->AGL3                  --------->AHL20(2)                              <---        ------>NtERF2                   --------->ANAC46                                        <----       --------->ALFIN1                <---------LBD16                                          -----     --------->LBD16                   <---------At5g28300                                      -----    --------->LBD16                   <-----------GT1                                           <----   <---------LBD16      --------->At4g35610      --------->AHL20(1)                            <----- ---------ARR14(2)      <---------At4g35610      <---------ARR11(3)                            ====== -------->ARR14(2) <---------ZAT6  <---------GLK1(1)                   --------->AtLEC2      <-------   aaaatcccggtgccgaaaatagagttagcttcaatggatttcacggtgcaaaatattacaatgactcgtcttaatgcaaaatgggatttgtcgataagga  26385100        ------>ZmHOX2a(2)      <---------ARR11(3)      --------->ARR11(3)      <-----------ARR10 --->ZmHOX2a(2) ===================HOX2a_HOX2a                         <---------ANAC58 ===================HOX2a_HOX2a                         <---------ANAC58 ------GLK1(1)                                 <---------At4g35610 ---ZmHOX2a(2)                                 --------->HSFB2a(1) -----ARR14(2)                                 --------->HSFC1(2) ---->ARR14(2)       XXXXXXXXXXXXXXXXXXXX>MIR861-3P <---------ANAC58 ---->ARR11(3)    ----------->GT1              <---------HSFC1(2)                               ----- -----ARR11(3)  <--------P             --------->ARR11(3)                                     ------- -ZmHOX2a(1) ------>ZmHOX2a(1)         <---------ARR14(3)        <---------GLK1(2)        ----------- ==============HOX2a_HOX2a             <---------ARR11(3)<----------DOF2                  --------->ANAC46 --TOE2(3)   --------->LBD16   <---------REM1(2)    <---------ANAC58              --------->TOE2(3)   tccctgatgatcttcctggtaagtatatatgtcttcaaggagaccttgaagcttccttgctttacaagaatgtcactcttgctacctcatccccacaaaa  26385200                                                        <---------TOE1(2)                                                        --------->ARR14(2)    ------->TEIL                                    <---------TOE1(2) --------->ICU4                            ------>ZmHOX2a(1)                               <---------ARR14(2) ---->YAB1                                --------->TOE2(3)                                <---------GLK1(2) --->DOF2                 <-----------GT1 --------->TOE1(3)           <---------WOX13(1)   --------->ARR14(2) >RAV1(1)     ------>ZmHOX2a(1)     <---------AHL20(2)  <---------ARR14(2)------->TEIL   ----------->ARR10   gtaatgaatctatttcctactattttttaaacccgttttaaattccttaattcgttcgtattttcaaaactaattgaatcttgtatatgatcagatacta  26385300                                                                         ----------->GT1                                                                     --------->ATHB12                                                                 <-------GAMYB                                <---------GLK1(1)               <---------DEAR3(2)                               --------->ARR11(3)              <---------RAP2.6(2)                               <---------ARR11(3)              <---------ANAC46               <------                             <---------TOE2(3)          <---------ARR14(2)              <-----------GT1                      <---------GLK1(2)               ----------->ARR10<---------WOX13(1)<---------TOE2(3)                     --------->At4g35610         --------->LBD16<---------MYB46(3)    <---------YAB1                     <---------At4g35610       <---------HSFB2a(2)  <---------YAB1 <---------AHL20(2)                     <---------ZAT2      <---------TOE2(3)     <---------DEAR3(1)  <---------YAB1----                 --------->TOE2(3)   <---------At4g35610--------->ARR11(3)      <---------AHL20(1) --------->TOE2(3)------>ZmHOX2a(1)  --------->At4g35610<---------ARR11(3)      --------->AHL20(1)   caatctcaaatacttcaatcctcagcttcttaagatttcagctaatgtttccgaagtagatattggcggtttgattggaaaaaatattattaacgatgtc  26385400  Previous    Next  AGI:  At1g70040.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G70120.1); contains InterPro domain Protein of unknown function DUF1163 (InterPro:IPR009544) Range:  from: 26384896    to: 26385794    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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