Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                       <---------ICU4                                                                     <--------HAHB4               <--                                                                     --------->ATHB12      <---------AHL20(2)                                                                     --------->YAB1        --------->AHL20(2)                                                                    --------->ICU4        --------->AHL20(1)                                                          --------->YAB1                  --------->AHL20(2)                                         --------------->AtSPL8     <---------ATHB12      <---------AHL20(1)       <---------ARR11(3)         <-----------GT1        <---------YAB1                   <---------AHL20(2)       --------->ARR11(3)        --------->AHL20(2)     --------->ARR11(3)            <---------AHL20(2)     ----------->ARR10           <---------AHL20(2)     <---------ARR11(3) --------->TOE2(3)   <----- ------>YAB1              --------->GLK1(2)       --------->TOE2(3) <---------YAB1    <---------AHL20(1) ------YAB1              <---------GLK1(2)       --------->REM1(1)--------->WOX13(1)  --------->AHL20(2)   tcatagtaagatactattttttaaaaagattctatttaaacatatggtactacatcaatatcataagttaatcattacatcaacttaaaaaatttattta  26382100                         <---------ICU4                         <--------HAHB4                        --------->ICU4                       <---------MYB52(1)                     ----------->GT1                    --------->MYB46(3)                  ------>MYB83                  ------>MYB46(1)                  --------->MYB52(1)                <---------MYB59                <---------MYB52(2)               --------->DEAR3(2)              --------->SPL7              --------->MYB52(1)            <---------SPL7   --------->AHL20(2)           <---------ANAC58  --------->AHL20(1)           <---------ANAC58  <---------AHL20(1)          --------------->AtSPL3          <---------------AtSPL3                         <---------ANAC46          <---------TOE2(3)  <---------AHL20(2)        <------MYB83                  <---------ARR14(2)          <---------TOE1(3) <---------AHL20(2)         <------MYB46(1)    ------>MYB83          <---------------AtSPL8                    <---------MYB52(1)  <---------MYB59         <-----------GT1<---------ATHB51    <-----------ARR10<---------CCA1(2)  <<<<<<<ZML2 -------MYB52(1)<---------MYB46(2)          --------->ARR14(2)------->TEIL------>MYB46(1) ----AHL20(2) ------->TEIL  --------->AHL20(2)     --------->ATHB12  <-----------GT1 --------->ARR14(2)   gttagtctgtttaacgtaccgaaccgataattaaatttcgaaatcaaatctaccgattggtttgtatctaataaccaaactagaaccgatttgcacaaac  26382200                                                      --------->AHL20(2)                                                    <---------HSFB2a(2)                                                    --------->HSFB2a(2)                 <------MYB46(1)                                                <----------DOF2                         <------MYB83                                         <---------DAG2                                 ----------->GT1                                         <----------DOF2                    ---------->DOF2      <---  <---------MYB52(1)     <---------AHL20(2)  <-----------GT1            --------->YAB1 --------->MYB59   ttcggtttggacttatcaattttgtttttaatctgaaggcctacttttttctttctataaatattggataagactcataaaagtagtatttggtatatta  26382300                                                                         <---------ANAC55(2)                                                                         <---------ANAC58                                                                         --------->ANAC55(2)                                                                         <---------ANAC58                                                                        --------->SPL7                                                                        ------->TEIL                                                                        <-------TEIL                                                                      <---------SPL7  <---------ARR11(3)                                                                      --------->TOE1(2)                                                                    --------------->AtSPL3                                                                    <---------TOE1(3) --------->GLK1(2)                                                                    <---------TOE2(3) --------->ARR11(3)                                                                    <---------------AtSPL8                                                                    --------------->AtSPL8                            ----------->GT1               <---------GLK1(2)        <---------ANAC55(2)                <---------------AGL15                     --------->ARR11(3)       --------->ANAC55(2)     ----------->GT1 ---------->DOF2         <---------YAB1         <---------------AtSPL3 ---------->DOF2--------------->AGL15     <---------MYB52(1)  <---------YAB1 <---------ARR11(3) ------TOE2(3) ----------------->AGL3   --------->YAB1---------->DOF2 --------->TOE2(2)  <----------DOF2   agaaaaagagtaaaaaatccatataaaggagagaaaatcgaatcgttatgttaacaaaaagattatgtttaacgtacgtgatattaagtatctttatatg  26382400                                                                                                <----                                                                                                <----                                                                                                -----                                                                                                =====                                                                                                -----                                                                                                <----                                                                                                <----                                                                                                -----                                                                                                <----                                                                                                <----                                                                                               <-----                                                                                              <------                                                                                       <-----------HVH21                                                                                    <---------ANAC46                                                                                    --------->TGA1a                                                                                    <---------TGA1a                                                                                    <---------ANAC55(1)                                                                                    <---------ANAC55(2)                                                                                    =================                                                                                    --------->ANAC55(2)                                                                                    <---------O2<----                                                                --------->ARR14(2)  --------->O2<----                                                          ====================================bZIP_DOF                                                          <----------DOF2           <---------ANAC58                                                          ===========================================                   --------->TOE1(3)           <------------CBF ------->TEIL        <---------ANAC58                   --------->TOE2(3)  <----------DOF2    *TSS   <---------ARR14(2) <-----------------            --------->YAB1        <----------DOF2 <-----------HVH21              <---------MYB52(1)          <-----------TBP    --------->SPL7 ------------>CBF   <---------CCA1(2)<-----------HVH21     ----------->GT1        --------->MYB52(1) <<<<<<<<<<<<WRKY18      ------>ZmHOX2a(1)     --------   actcatgtagttatttataaacctaaaaccttacgactttctttgtgtcaattgtcaagtcttttgtatcttcctgtaagcctgttacgtgtgaggtaac  26382500     <---------ICU4  --------->WOX13(1) -----ANAC55(2) -----ANAC55(1) ---->ANAC55(2) =====================================bZIP_DOF ---->TGA1a -----ANAC58 -----ANAC46                        =========================HOX2a_HOX2a ---->O2                           --------->ARR14(2) -----O2  <---------ANAC58         <---------ARR14(2) -----ANAC58                     =============HOX2a_HOX2a         --------->ZAT14                  <- ------------------TaNAC69(2)    ------>ZmHOX2a(2)    ------>ZmHOX2a(1)                            <- ---DOF5.7(2)                    ============================HOX2a_HOX2a                           -- =====bZIP_bZIP        --------->ZAT18 ====================HOX2a_HOX2a                          ----- -----TGA1a            <---------ZAT18 ------>ZmHOX2a(1)          <---------ZAT14  ================== -----bZIP60(2)    =====================HOX2a_HOX2a ------>ZmHOX2a(2)      --------->GLK1(2)  ------- =====bZIP_DOF     ========================HOX2a_HOX2a====================================HOX2a_HOX2a ------TaNAC69(2)  ------>ZmHOX2a(1)<------ZmHOX2a(2) <---------CCA1(2)    --------->ICU4     <------ --->HVH21<---------ANAC58 <----------DOF2    <----------DOF2 <-----------GT1      <------ZmHOX2a(2)   gtgtccatcaatacttgtgtcctagcgaactttgatcgatcctcttcactttgatcctatcttgtttctatactgaaattcttagatcaaaatatagtgt  26382600                                                                                                <----                                                                                               <-----                                                                                        ------>ZmHOX2a(2)                                                                                       <------ZmHOX2a(2)                                                                                       --------->CCA1(2)                                                                                      <---------AGP1                           --------->ARR14(2)                                         <-----------ARR10   --------->GLK1(2)       <---------ARR14(2)                                         --------->ARR14(2) --------TGA2(1)           --------->ARR11(3)                                         --------->ARR11(3) --------bZIP60(1)         <---------ARR11(3)                                         <---------ARR11(3) ------->bZIP60(1)        <---------CCA1(2)  --------->At5g28300                      <---------ARR14(2) ------>HVH21          <-------TEIL       --------->At4g35610                         --------->AGP1 ================HOX2a_HOX2a              <---------At4g35610                       ----------->ARR10 ---->GT1   ------------>MYB.PH3(2)  --------->ETT(2)                          <---------WOX13(1) ---ZAT6  <------ZmHOX2a(1)<-----------ARR10----------->GT1  --------->ICU4 <---------YAB1--------->ZAT18   gacataatctgaggagtaagttagattcaaatcttctggtcgatagctgtaaattcccttgcaatgttttctatgactctaattgctagatctgcgctgg  26382700                             <<<<<<<<<<GT-3b              <---------MYB52(1)                      <XX     ------->TEIL          <---------YAB1     --------->ARR11(3)                               ------ ---GAMYB                --------->AHL20(2)   <---------ARR11(3)    --------->CCA1(2)     ---------->DOF2 ----MYB46(3)        <---------YAB1          <---------CCA1(2)   <---------TOE2(3)--------->ICU4 <---   ttgtatgaatttttgggataatttcgattatttttctttgaacttatatatcttgaattcgtttattgagatttaagacttgtattgattttcaaagttg  26382800                                                           <---------At4g35610                                                           --------->At4g35610 XXXXXXXXXXXXXXXXXXMIR832-3P         <---------LBD16       <-------GAMYB       --------->ATHB12 ----->GT1                 <-----------GT1           <-------PIF5              <---------MYB46(3) ------ANAC46   --------->TOE2(3)   ------>ZmHOX2a(1)------->PIF5             <---------YAB1  -------   tttatattgggagtcgaacattaatctattttctcttcctctggataatgaagcacttgccagttgtcagtttcaaaaccatggttgcaaataagaagct  26382900                                                                                             <-------                                                                                             --------                                                                                           <------ZmHOX2a(1)                                                       ----------->GT1                   <---------TOE2(3)                  <---------GLK1(1)                    --------->YAB1                 <---------YAB1            ------->TEIL                          --------->ARR11(3)                --------->YAB1          <---------ZAT18                         <---------ARR11(3)           <---------TOE1(2)     --------->MYB46(3)       ----------->GT1   <---------YAB1     --------->YAB1  <------ZmHOX2a(2)  --------->MYB46(3)   ------>ZmHOX2a(1)    --------->ARR11(3)    <---------YAB1   ===============HOX2a_HOX2a -->At4g35610     --------->GLK1(1)    --------->AHL20(2)      --------->AHL20(1) --------->ARR11(3)   aactacaaccgatgcacttgatttcctccatcttgtaaaaactaaatatcaagataatcgtgaaatatatgatagttttcttacgatcatgaaggatttc  26383000  Previous    Next  AGI:  At1g70020.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G39330.1); contains InterPro domain Protein of unknown function DUF1163 (InterPro:IPR009544) Range:  from: 26381033    to: 26382022    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g70030.1    Description:  paired amphipathic helix repeat-containing protein. similar to paired amphipathic helix repeat-containing protein [Arabidopsis thaliana] (TAIR:AT1G70060.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14871.1); contains InterPro domain Paired amphipathic helix; (InterPro:IPR003822) Range:  from: 26382457    to: 26384042    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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