Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       --------->ANAC58                                                                                     <---------HSFB2a(1)                                                                              --------->ZAT14    <---                                                                              --------->ZAT2     <---                                                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)     <---                                                        --------->YAB1        <---------ZAT2     <---                                                       <---------YAB1      <---------ANAC58 ---------                    <---------ZAT18                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)  <----------DOF2             --------->ETT(2)                      <----------DOF2         <---------ANAC46 <--------             <---------ETT(2)              <------ZmHOX2a(1)               <---------ANAC58<---------YAB1    <---------MYB46(3)                  <-----------RAV1(2)   --------->MYB46(3)     --------->HSFB2a(1)    --------->MYB52(2)               xxxxxxxxxxxxxxxx>smallRNA(i) <----------DOF2 <------ZmHOX2a(1) - --->ICU4 ------>ZmHOX2a(1)  <----------DOF2     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)--------->ANAC58   aagggtttgttcctgtcgatagtgaccttctctttgtattcaccaggagccatctttatgatcacccgctttgtgttccctgcaggaacgctctttattg  26348300                                               <---------ICU4                                              --------->ICU4                                            <---------ICU4                                            <---------AHL20(1)     --------->MYB52(2)             ----------->RAV1(2)   <---------MYB52(1)          --------->ARR14(2) <-----------GT1  <-------GAMYB           <----------DOF2   <--------ATHB1 <---------MYB46(3)     <---------DAG2      --------->AHL20(2)                 --------->ARR11(3) ------ANAC58          ------>MYB46(1)      --------->YAB1                     <---------ARR11(3) ------RAP2.6(2)       ------>MYB83 --------->At4g35610                        --------->GLK1(2) ------ANAC46        <---------ALFIN1       --------->ATHB51               --------->YAB1 ------ANAC58        --------->DEAR3(1)    --------->ICU4         --------->AHL20(2) >ATHB12            --------->MYB46(3)     <---------ATHB12       <---------AHL20(2) -ICU4 <---------ZAT6--------->AtMYB61     <---------ATHB51       --------->AHL20(1)           <----- -------->SPL7    <-----------GT1   <---------At4g35610          --------->AHL20(2)          <-------   cgtccgttagtgttttgaattcaccaccctttggattcacctgcaataatttttacatgtttttcaaaaaaattgtatcaaaatctattggtacaaagga  26348400                                                    --------->ZAT2                                                    --------->At4g35610                                            --------->ATERF1(1)                                           <---------At4g35610                                           --------->At4g35610                                       --------->ALFIN1               <------ZmHOX2a(2)                                     <---------ANAC55(2)             <-----------ARR10                                     <---------ANAC58  --------->ZAT2--------->ARR11(3)                                     <---------ANAC46  <---------At4g35610        <---------ANAC46                                     <---------ANAC55(1)             <---------ARR14(2)                                     <---------O2   <---------ZAT2   --------->ARR14(2)             -                                     <---------ANAC58  --------->At4g35610    <----------DOF2       -                                    <-------TEIL  <-----------RAV1(2)<---------AGP1                --                                   --------->CCA1(2)<---------At4g35610------>ZmHOX2a(2)         ---- -ZmHOX2a(1)                    <---------YAB1    ---------->CDC5    <---------ARR11(3)          ---- --TOE2(3)           <---------------AtSPL8--------->ZAT2           <------ZmHOX2a(1)      --------->MYB52(1)   tgagtttaagacaataagtgtgaatagtacgttgatgatacgtggagcagcctcagcagctacaagagcaggatctaagcctttacgttgagccaatgga  26348500                         <---------TGA1a                         --------->TGA1a                    <---------At4g35610                         <---------O2                       --------->At4g35610                         --------->O2                  --------->bZIP60(1)                       <---------ALFIN1                <---------bZIP60(1)                     ------>NtERF2                     --------->bZIP60(2) ----->MYB83  --------->MYB46(3)                   <-----------HVH21 ----->MYB46(1)     --------->ANAC46              --------->bZIP60(1) ------->MYB52(1)  <---------ZAT18              <------MYB46(1) ----->MYB46(3)    --------->ZAT14              <------MYB83----------->RAV1(2)    ---------->DOF2 ----->DEAR3(2)<---------ALFIN1                <---------AtMYB61       --------->AtMYB61        -----   ccaacgttggcattgaaccactgcgccacttggggtttgccctctgggattggtgtcacatcatctgcgaacaccatcggtgtaacaaagaccatcaaca  26348600                                                  <---------AHL20(2)                                                  --------->AHL20(2)                      ---------->ID1                                              <---------AHL20(2)                    <----------------                                       <---------AHL20(2)                          <-----------------                                       <---------AHL20(1)                         <---------AHL20(2)                                   <---------AHL20(2)                           <---------YAB1     --------->AHL20(1)           <---------AHL20(2)  --------->YAB1           <---------AHL20(2)     --------->AHL20(2) --------->ARR14(2)   <---------YAB1                    <---------AHL20(1)     <---------AHL20(2) ------->TEIL   --------->AHL20(2)  ---------->DOF2   <---------YAB1         <     <---------AHL20(1) <---------ARR14(2)  <---------AHL20(2)            <---------AHL20(2)     ---- -->GAMYB              <---------CCA1(2)  <---------YAB1--------->AHL20(2)--------->AHL20(2)    <----   ggcctaataaaatggacacatttgtgtatcccattttttattttatttttatttaaaaataaaaagttttttttgttttattatttttttttgttttttt  26348700          <---------LBD16                                                                        <---        <-----------GT1                                                                         ----- --------ANAC81                                                                                 ----- -------ANAC81  --------->ATHB12                                                                ----- ---------MYB52(1)   *TSS ---------->DOF2      <-----------GT1                                 ------ ------>ID1<---------HSFB2a(2)             <-----------TBP        <------------CBF             <----- -------GT1--------->HSFB2a(2)       --------->ICU4           <---------MYB59           <---------MYB52(1)   tcgttttttttttctggatgatttgatggaaagatggccatgagtatatatactgtttcagagacctaaattgttttgagttttgttctcgtttgctatt  26348800                                                                        --------->AHL20(2)         --                                                                        <---------AHL20(2)         <-                                                                    <---------AHL20(2)           <---                               <---------YAB1                       --------->AHL20(2)          ----- <---------ANAC58          --------->LBD16                          <---------AHL20(1)          <---- <---------ANAC58         --------->ANAC46                          --------->AHL20(1)          ----- ---------CBF             --------->ANAC58                       --------->AHL20(2)           <------ ---->ATHB51              --------->ANAC58                       <---------AHL20(1)        <---------YAB1 ---->YAB1               ------->GAMYB                           --------->AHL20(1)      <-----------GT1 --->ATHB1             -------->P                              <---------AHL20(1)    <---------ARR11(3) --->ICU4          <-----------GT1                             --------->AHL20(1)    --------->ARR11(3) ----YAB1   ------>ZmHOX2a(2)<----------DOF2                   <---------ARR11(3) <---------WOX13(1)   attgtttgtggtgatccatttttgcaacccgctataatttctcttggaattttgtatgttttcaaaatattttattaattcttgatagattttactatta  26348900    <-----------GT1 ------->AHL20(1) --------AHL20(1)                                                                       <---------AHL20(2) ------TOE2(3)                                                ------->TEIL  --------->AHL20(2)  <---- ---->YAB1                                <---------ZAT14 --------------->AtSPL8       --------->AHL20(2) -----AHL20(2)                        --------->ZAT6    <---------AHL20(2)  <---------AHL20(2)  ----- ---->AHL20(2)                   --------->YAB1    <---------MYB52(1)      --------->AHL20(2)  ------ ---YAB1      <---------MYB52(1)<---------YAB1   ----------->GT1          <---------YAB1--------->AHL20(2)   atatttttactacatcgtttttttttttgtgattttgataagactatacaactgttaatttatgtaccataagtttattaaaaaaacaatttaaaaaaaa  26349000                                                                         --------->YAB1                                                                         <---------ICU4                                                                     <---------YAB1                                            --------->TOE2(3)<---------ALFIN1                              <---------LBD16               ------>MYB83<---------YAB1     --------->AHL20(2)       --------->LBD16               -------->P--------->YAB1 <---------YAB1              <---------TOE2(1)              ------>MYB46(1)                      ---- -----AHL20(2)               <---------TOE1(1)             ----------->RAV1(1)           <----------- ---->AHL20(2)  --------->ETT(2)   ----------->GT1        --------->AtMYB61         <----------DOF2 - --->AHL20(2)   <---------ETT(2) <------ZmHOX2a(1)       --------->MYB46(3) <-----------GT1<---------   aatttgattaaatccatgtcgagagacacatccgaggaggtaacaacatcaacatgttcaccaacaccattttgataataacatacctttgggctatatt  26349100                                       ---------->DOF2                           --------->YAB1                                 --------->ICU4                                 <---------ATHB12                               --------->YAB1                            --------->ZAT2<------ZmHOX2a(1) ----->YAB1         <---------DAG2   <---------AHL20(2)                  --------->At4g35610 ----------WRI1     <----------DOF2  --------->AHL20(2)      <----------DOF2  --------->WOX13(1) --------->DOF2---------->DOF2--------->AHL20(2)   <---------WOX13(1)    <---------At4g35610 -DOF2----------->GT1   --------->AtLEC2        <---------YAB1          --------->GLK1(2)        ----   tataaagatggtttcttaaaagctttatgcaaataaaaattaaaagcattcagattgacacctctttcaagaagaagctgcaatcaagaggacataaaca  26349200  Previous    Next  AGI:  At1g69940.1    Description:  ATPPME1; pectinesterase. similar to pectinesterase family protein [Arabidopsis thaliana] (TAIR:AT5G07410.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62286.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN66682.1); contains InterPro domain Pectin lyase fold (InterPro:IPR012334); contains InterPro domain Pectinesterase, catalytic; (InterPro:IPR000070); contains InterPro domain Pectin lyase fold/virulence factor (InterPro:IPR011050) Range:  from: 26347032    to: 26348721    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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