Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    <--                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                                <----                                                                                                -----                                                                                               ------                                                                                    <-----------GT1 -                                                                                 <---------ICU4<-----                                                                       <------ZmHOX2a(2)       <-----                                                                      <---------ARR14(2)     --------                                                         ----------->GT1 <----------DOF2     --------                                                      <---------ARR14(2)------>ZmHOX2a(2)    <-------                                                     ==========================HOX2a_HOX2a  ---------                                              >>>>>>>>>SARD1          <---------ARR11(3)    ---------                                              >>>>>>>>>CBP60g         --------->ARR14(2)   --------->At4g35610                                          <------ZmHOX2a(1)   --------->AHL20(2)--------->ICU4------>NtERF2                                    <---------GLK1(1)=========================HOX2a_HOX2a  <---------At4g35610       --------->ATHB12  --------->TOE2(3)====================================HOX2a_HOX2a  ------>NtERF2 ----->TEIL              --------->TOE1(3)=====================================HOX2a_HOX2a <---------ATERF1(1) ----WOX13(1)  --------->O2         --------->GLK1(1)<------ZmHOX2a(1)--------->ARR11(3)  <----------   gaatctaaaccattgccaagtctcaaactttaaacgagaaatcaggaaatttggaggaatcgaaaaaaatgggatctttctaatttttacctctgccgcc  26279600 ----NtERF2 ----->LBD16 ------ATERF1(1) -->NtERF2 -----ANAC46                                                                                  <------ ---->DEAR3(1)                                                                                ------- --->ATERF1(1)                                                                                <------ ----->NtERF2                 ------>NtERF2                                                   ------- ----LBD16                   <---------LBD16                                        <---------------AtSPL8 -NtERF2                    <---------LBD16                    --------->CCA1(2)  --------->ATHB12 ->DEAR3(1)               --------->GLK1(2)                 ----------->ARR10  --------->TOE2(3) ->ATERF1(2)              --------->ARR14(2)         <---------ANAC46          <---------ANAC58    <- --ATERF1(2)              <---------ARR14(2)         <---------ANAC58   <---------GLK1(2) <----------DOF2 >ATERF1(1)              <---------GLK1(1)     <---------TOE2(3)      ----------->ARR10<-----------GT1 >RAP2.3(1)     <------ZmHOX2a(1) ---------->DOF2    <---------ANAC58<--------P<---------ANAC58    -- -RAV1(1)    <------ZmHOX2a(1)--------->LBD16  <---------TOE1(3)   <---------ANAC46 --------------->AtSPL8   ggggacttgagggaaggaggagactgggattccggcgaaagcagagtttagggtttcttgaagagatttgggtagattcttccttgattgtactttctcg  26279700           <---------ZAT2           --------->ZAT2     <-----------HVH21                                      --------->LBD16  --------->ANAC58            <-----------GT1               ------>NtERF2  --------->ANAC58           <-----------GT1               --------->ANAC58 ---HSFB2a(2)               <---------AHL20(2)    <-----------HVH21     <-----------GT1 -->HSFC1(1)        --------->DEAR3(1)            <----------DOF2  <---------ANAC58 ---HSFC1(1)        ------->GAMYB   ------>ZmHOX2a(1)      --------->ANAC46 -->HSFB2a(2)      <------------AtMYB77      <---------At5g28300   <---------ANAC58 --------ARR14(2)  --------->MYB46(3) <---------ARR11(3)   --------->ANAC58 ------->ARR14(2)  --------->DEAR3(2)<---------CCA1(2)    <---------LBD16--------->MYB52(1)   aaatacgcttcacagcttgaaaccgccgattttatctccttatcttctaccgcttcacttcccgccatgtcttgataccggctcaatttgaagaatttca  26279800                                                                                                    <                  <<<<<<<<<RAP2.2                                    <------ZmHOX2a(1)            <--                 <---------TOE2(3)                                  ----------->GT1              ----          <---------YAB1                                           <---------TOE1(3)         <-------    --------->TOE1(2)                                   <---------DAG2                       --------    --------->TOE2(2)                                   <----------DOF2      ---------->DOF2<<<<<<<<<  --------->ARR14(2)                           ---------->DOF2     <---------TOE2(3)  --------->GLK1(2)   aacaaatctacgatgattttagattggaaacgatgaaacccagaagaaaaaaagagagcttttttggttaaggaaaaaaaaaagagagaatttagaacag  26279900                                                                                               ------                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                            ---------                                                                                            *TSS                                                                                            ---------                                                                                           ------->MYC3                            <------NtERF2                               ------>ZmHOX2a(1)  <-------MYC2                        <-----------HVH21                        --------->ANAC46          ------->MYC2                      ------->MYC3                             <---------ANAC46            <-------MYC3                     --------->TGA1a                           <---------ANAC58           --------->O2                     <---------O2                           --------->ARR14(2)            --------->ANAC55(1)                --------->ANAC58                            <---------ARR14(2)            --------->ANAC58       <---------MYB46(3) <---------ANAC46                  <---------MYB52(1)            --------->ANAC55(2)      --------->ALFIN1<-------MYC3                         <-------GAMYB--------->ICU4    --------->ANAC46      <---------AtMYB61--------->ALFIN1                    =========================================MYC_MYB     <---------ZAT14 <---------TGA1a                       <-----------HVH21              --------->ANAC58     --------->ZAT14 --------->O2                         <---------MYB46(3)              --------->TGA1a    --------->ALFIN1 ==============================================MYC_MYB                <---------ANAC55(2)  <---------ANAC58   ===============================================MYC_MYB               --------->bZIP60(2)  <---------ANAC58   ============================bZIP_DOF <---------DEAR3(2)              <---------TGA1a  <---------ANAC46   ============================bZIP_DOF<---------DEAR3(1)               <---------O2 ---------ANAC46--------->ANAC58                         <---------ANAC46            ----------->HVH21 -------MYB46(3)--------->ANAC46                       =============================================MYC_MYB ----->ALFIN1 =================bZIP_DOF                ------------>AtMYB77      <-------TEIL  <----- --ZAT14      ---------->DOF2         <----------DOF2 <-----------RAV1(1)        --------->ZAT18 ->ZAT14  --------->ETT(1)--------->ETT(1)       <----------DOF2<---------LBD16  --------->ZAT14    < <<<<<<<<LFY --------->ARR14(2)    ------->TEIL  <---------DAG2<---------ANAC58  <---------ZAT14   --   tggtgagtgtggtcggataagcaacgtgtcggagatggacctttggtttcgcttttctggcggttacgcgcgtcctgatgaagtgcattgacacgtgacg  26280000                                                       <---------bZIP60(2)                                                       --------->TGA1a                                                       ==============================================                                                       <---------ANAC58                                                       --------->O2                                                       <---------O2                                                       <---------ANAC46                                                       <---------TGA1a                                                      <-----------------------TaNAC69(2)                                                     ------>NtERF2                                                     <---------TGA2(2) --------->YAB1                                     ----------->HVH21 --->bZIP60(1)                                      ----------->TGA1                              --- --->ANAC55(2)                                      --------->WRKY12                          <------ ----->GT1   <---------ANAC46                     <---------At4g35610                         <------ ----ANAC46<---------ANAC58                   --------->ARR14(2)                             <------- -->HVH21  <---------ANAC58                   <---------ARR14(2)                      ----------->GT1 -->TGA1   <---------ANAC46               <---------LBD16--------->ALFIN1     --------->CCA1(2)------ ----bZIP60(1)                    ----------->GT1 --------->At4g35610--------->ARR14(2)     <-------- ---------YAB1               <-----------GT1--------->LBD16        <------NtERF2   --------->MYB52(1) ------->AHL20(2)       ----------->GT1 <-----------GT1<---------ANAC58    <---------TOE2(3)---------   ttataataagtggtcgtgtgtcaaaagagtttaacagcgttataaccggagtcgctgacgtggatgggccgaattctaagatagaaaacggtagtaacgg  26280100                                                                                              -------                                                                                           <---------TOE2(3) ==MYC_MYB                                                                           <----------DOF2 -------->RAV1(2)          <---------ARR11(3)                                        ---------------- ---ANAC58           ----------->GT1             <---------TOE1(2)                  <---------------AGL15 ---ANAC58         ---------->DOF2    --------->YAB1                                --------------->AGL15 ----------------TaNAC69(2)--------->ARR11(3)<-------TEIL                          ----------------->AGL1 ->GAMYB         <---------AHL20(2)  <------ZmHOX2a(2)       <----------DOF2       <-----------------AGL3 ---GT1      --------->ATHB12    <---------WOX13(1)      <----------DOF2           ----------------->AGL3 >MYB52(1) <---------WOX13(1) ----------->HVH21  <---------TOE2(2)              <----------DOF2   gcctgagcccaagattgatttaaaagtaatatctgatggatcatagtttcatacgttttctttcttttggtcattttgttttctttcctttttaagaatc  26280200                                                                            <---------ICU4                                                                            --------->ATHB12                                                 <---------WRKY12          <---------YAB1                                                --------->WRKY18(1) <---------YAB1               <---                  <------NtERF2                <--------ZAP1      <---------AHL20(2)          ------- -->GLK1(2)     --------->ALFIN1   --------->ARR11(3)           --------->AHL20(2)         --------->YAB1 ----->WRI1  <---------TOE2(3)     <---------ARR11(3) <-------TEIL--------->AHL20(2)  ----------->GT1   gaccatctaaacatttaggtggctcaaacaattcagacatcttcatttcggtcaaattcatcacaaatttatatttgataattgagggaagtaaaataat  26280300                                                                                   --------->YAB1                                                                                <---------ICU4                                                                                --------->YAB1                                                                               --------->ICU4                        --------->YAB1                                       <---------ICU4                   --------->AHL20(2)                                        --------->YAB1                   <---------AHL20(2)                                       <---------YAB1               --------->AHL20(2)                                           --------->ICU4              --------->AHL20(2)                                          --------->YAB1            <   <----------DOF2--------->YAB1                                        --------->AHL20(1)          - ------ICU4   <---------AHL20(2)       <-----------GT1                  --------->AHL20(2)          - -->YAB1  --------->AHL20(2)        <---------ICU4                     --------->YAB1               <   caattcttttatgtaaataattttaatggtgactacaattttgaccatcaaattagtaaatgtctgtagcaaaaaataataataatcaaattagtaaaca  26280400                             <---------ANAC46                 --------->YAB1 ----------->GT1               --------->ANAC55(2)   ------->TEIL --------->AHL20(2)                         <---------AHL20(2) ---------ANAC55(1)       <---------MYB52(1)         ------>MYB46(1) -------->ANAC55(1) --------->YAB1                   ------>MYB83                     ----------->GT1 -------->ANAC55(2) -------->HAHB4                 ------->GAMYB            <---------TOE2(3) ---------ANAC55(2)<---------YAB1               <-----------GT1            ---------->DOF2 --------->ICU4   atacgtatgtgatttcaaataataatacgttgtgttgataatttgtcaaataacccactattttatgtgatgctaactaaagtttattttgtaaaaatca  26280500  Previous    Next  AGI:  At1g69800.1    Description:  CBS domain-containing protein. similar to KING1 (SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT GAMMA 1) [Arabidopsis thaliana] (TAIR:AT3G48530.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41048.1); contains InterPro domain Cystathionine beta-synthase, core (InterPro:IPR000644) Range:  from: 26277893    to: 26279992    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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