Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   --------ICU4 ------->YAB1 -------ATHB1           <-----------HVH21 ------>HAHB4          --------->bZIP60(1) ------>ICU4           <---------bZIP60(1) -------ATHB51       <-------GAMYB -------YAB1        <-----------RAV1(1)                                                            <- ---->YAB1    <---------YAB1                                                                      <-- ----ATHB51 <---------AHL20(2)                                                                    --- ----ATHB12--------->AHL20(2)            --------->AHL20(2) --------->ZAT14                       <--   ataattctatctatttattattctgttgtcacatatgtacaaaatatatgtaaacttctcagttctgtctgaatcgctgaaattttcgctaaatgtgcaa  26219500                                                         -------->HAHB4                                                         --------->ATHB12                                                         --------->ATHB51                                                         <---------ICU4                                                     --------->AHL20(2)                                                     <---------AHL20(2)                                                 <---------DAG2                                                 <----------DOF2                                            <-----------HVH21                                            <-----------TGA1                                           =========================================bZIP_DOF                                           --------->ANAC46                                           --------->ANAC58                                           <---------bZIP60(2)                                           --------->ANAC55(2)                                           <---------bZIP60(1)                                           --------->bZIP60(1)                                           --------->bZIP60(2)                                           ===============================bZIP_DOF                                           --------->ANAC58                                           =================bZIP_DOF                                           <---------TGA2(1)             <----------DOF2               <---------O2  -------->ATHB1             ========================================bZIP_DOF            <---------ANAC46               --------->TGA2(1)          ------>ZmHOX2a(2)                --------->O2 <---------ATHB51         <------ZmHOX2a(2)                 --------->TGA1a      --------->LBD16                      <---------TGA1a     --------->HSFB2a(2)                  ----------->STF1     <---------HSFB2a(2)                  <-----------STF1    <---------LBD16                      <---------TGA2(2)                            <---------ARR14(2)  <-----------GT1                       ----------->TGA1--------->ICU4                --------->ARR14(2) --------AHL20(2)                    --------->GLK1(2)  <---------YAB1            <-----------------AGL1 -------AHL20(2)     --------->MYB52(1)<---------MYB52(2)<---------AHL20(2)    <---------ZAT6 ------>AHL20(2)     ------------>AtMYB77--------->MYB52(1)<---------YAB1---------->DOF2  ----------- -------AHL20(1)     ================================MYC_MYB   ---------->DOF2 --------->ALFIN1     <   ttaatttcccgatcgcttgaagttaacagttacgacgagaaactgacgtcactttttaattattgtaaagaatgaaaaagagtgttcgtatagggtaatt  26219600                                                                                     <------ZmHOX2a(1)                                                                                    ----------->GT1                                                                                    <----------ID1                                                                                   <---------TOE2(3)                                                                            --------->ANAC58                                                                            --------->ANAC55(2)                                                                            --------->ANAC46                                                                            <---------ANAC55(2)                                                                            --------->ANAC55(1)                                                  --------->AHL20(2)        ----------------->AGL1    ----------->GT1                    --------->ANAC58                     --------->ANAC58   <---------YAB1                      --------->ANAC58                    ------->TEIL --------->ATHB51                      --------->ANAC46 <-----------GT1  <---------ZAT14 -------->ATHB1                 <---------ICU4 --------->TOE2(3)         --------->ZAT14       <----- >GT1                     --------->YAB1    ----------->RAV1(1)<----------DOF2   --------->ICU4------ ---------YAB1     ------->TEIL--------->AHL20(2) <---------AHL20(2)   --------------->AtSPL8  <-----   gtattattgtaaaaaactatgtatccaaacacaataaatacacgaacaacatttattttcactcactttgatcactgtacgtaataaggaaaaacatttt  26219700                                         <---------CCA1(2)                                   --------->ANAC58                                   --------->ANAC58                               --------->ANAC46                               --------->ANAC58                               <---------ANAC55(2)           <---------------AtSPL8 --------->SPL7                                                    -       ------->TEIL            --------->ANAC55(1)             <----------ID1                       -  <---------AtLEC2             --------->O2  <----------DOF2   ----------->GT1                      < ----AHL20(1)                  --------->ANAC55(2)           --------->MYB52(1)     ----------->GT1 < --->AHL20(2)                  --------->ANAC58<---------AHL20(2)    <---------GLK1(2)         ------ ----AHL20(2)                  --------->bZIP60(2)        --------->YAB1   ---------->DOF2   --------   atttgaatgaatatttgtacagattggagaaccacgtaagcccatctcttttatttccaaaaataacgaaaaattctcaaagggaatagtttataatgta  26219800                                                                          <---------ANAC58 <---------AHL20(2)            --------->DAG2                             <---------ANAC58 -------->AHL20(1)            ---------->DOF2                         <------------CBF -------->AHL20(2)         --------->CCA1(2)          <-------TEIL   <---------ICU4 ---------AHL20(2)        <---------ARR11(3)      --------->DAG2     --------->ATHB12 ---------AHL20(1)    ---------->DOF2    ----------->GT1    <----------DOF2<----------DOF2 --->AHL20(2) --------->AHL20(2)------------------------>ANAC81--------->YAB1 --->GT1   --------->YAB1 --------->ARR11(3)     ---------->DOF2    <-------TEIL       *TSS   aataaaattccaaaaataaaacacaaaagatataaagcagcaagagaaaaaaaaagtccatgctttcatattcattgctttaatctctctctctctctca  26219900                      <---------At4g35610                      --------->At4g35610              --------->HSFC1(2)              <---------At4g35610              <---------HSFC1(2)              --------->At4g35610                         <-----------GT1         --------->ZAT2   ---------->DOF2              --------->YAB1         --------->At4g35610                          <---------YAB1         <---------ZAT2 ----------->HVH21  ------>ZmHOX2a(1)                                ---------         <---------At4g35610       <-------TEIL<------ZmHOX2a(1)                     --------->At4g35610   gacatagacacagctaagcttcccatctgaaaggagtttcatgtcctaaggaccatattataacctctctatctctctctaagtatcagcaaaaaaacag  26220000                                                                                                  ---                                                                                                  <--                                                                                 --------->HSFC1(2)                                                                              ---------->DOF2    <---                                         --------->MYB52(1)                  --------->AtMYB61 ------                                        ----------->HVH21                 <---------ALFIN1     <-----                                       ------>ZmHOX2a(2)                  --------->AtMYB61   <------                                      <------ZmHOX2a(2)                  <---------MYB55(2) ---------                                      --------->CCA1(2)                  --------->MYB46(3) XXXXXXXXX                                     --------->ARR11(3)                 ------>NtERF2       <--------                                     <---------ARR11(3)               --------->MYB46(3)   <---------YAB1                                     <---------AGP1            <---------ALFIN1  <---------HSFC1(2) <         ----------->GT1             --------->AGP1     <---------ZAT14--------->ANAC46  --------->YAB1 >MYB52(1) ----------->GT1       ---------->DOF2        --------->ZAT14<---------ALFIN1 <------ZmHOX2a(2)   agatttatagagagagaaaaaaactatggctcacataaagatctaacagagacagtagtatagtcccacttccccaccaccaaagcttcgatcatcatca  26220100       <---------ICU4    --------->YAB1    <---------ICU4        --------->YAB1   <---------YAB1     --------->LBD16 --------->YAB1   <---------ARR14(2) <---------ICU4   --------->ARR14(2) ------>YAB1    --------->LBD16          ------>MYB46(1) -------ICU4  <---------LBD16            ------>MYB83 ------YAB1  <------ZmHOX2a(2)         <---------MYB59 --->YAB1   --------->ARR14(2)     --------->DEAR3(1) ----ICU4   <---------ARR14(2)  ------->GAMYB                                              --------->TOE1(3) ---YAB1    ------->TEIL <------ZmHOX2a(2)                                                 --------->TOE2(3) >YAB1<---------YAB1<---------LBD16--------->MYB46(3)   <---------GLK1(2)            <---------ALFIN1 XXXXXXXXXXX>MIR414<------ZmHOX2a(2)   --------->MYB46(3)      <---------GLK1(2)------>ZmHOX2a(1) -ICU4--------->ICU4------>ZmHOX2a(2) --------->ANAC46 <---------At4g35610   ------>ZmHOX2a(1)      < ---------YAB1------>ZmHOX2a(2)--------->MYB46(3)      <---------ZAT2       <---------ALFIN1------>ZmHOX2a(1)   tcatcatcatcatggatccggatccggatcataaccatcgacccaacttccctctccagcttcttgattcttctacctcctcctcttccacttccttagc  26220200                                                ------>ZmHOX2a(1)                                --------->TOE2(3)                                --------->TOE1(2)      ------->TEIL            ======================                                --------->TOE2(2)   <---------MYB52(2)       --------->ANAC58                      ------>MYB83           ------>ZmHOX2a(1)               --------->ANAC58      <-                      ------>MYB46(1)  <---------HSFC1(2)                  --------->ANAC58       <--                    <---------MYB59    <---------HSFB2a(1)                 --------->ANAC46       <--                    <---------MYB46(2) --------->HSFB2a(1)                 --------->ANAC58 <--------                    <---------MYB111(1)--------->HSFC1(2)                <---------ALFIN1   <------NtERF2 ---------ICU4    ------->TEIL------->TEIL<---------ATERF1(1)   ---------->DOF2---------->DOF2 ------   catcatctctactacttccgaacctaactccgaacctaagaagcctcctcctaaacgaacctctactaaagaccgacacaccaaagtcgaaggccgaggc  26220300                               <-------MYC4                               ------->MYC4                               <-------MYC3          --------->ZAT2                               ------->PIF5          <---------ZAT2                               ------->PIF4          <---------At4g35610                               <-------PIF5      ------->MYC2                               ------->MYC3     --------->O2                               <-------PIF4     --------->TGA1a                    ------->MYC3                --------->ANAC55(2)                    <-------MYC3                <---------ANAC55(2)                   --------->O2------->MYC2     --------->ANAC46                   =====================bZIP_bZIP------->MYC3                   ============================bZIP_DOF      <---------ANAC46        <---------TGA1a   <---------TGA1a      <---------ANAC58        =================bZIP_DOF      <---------ANAC55(2)     --------->O2      --------->ANAC58      <---------ANAC58        --------->TGA1a   <---------O2      <---------ANAC55(1)     --------->ANAC55(2)<-------MYC3      --------->ANAC55(2)     <---------O2      --------->ANAC58     ------>ZmHOX2a(2)       ------->TEIL--------->At4g35610    <------ZmHOX2a(2)   <---------At4g35610   <------------OsbHLH66   <---------ARR14(2)   --------->At4g35610----------->HVH21     --------->ARR14(2)   --------->ARR14(2) --------->ZAT18    <---------At4g35610     <---------ARR14(2) <---------DEAR3(2)--------->TGA1a  <----------DOF2  --------->At4g35610 --------->At5g28300 ============================bZIP_DOF    --------->ZAT2  <------MYB46(1)----------->GT1 -----NtERF2       <---------O2<-------MYC2<---------ZAT18<-----------HVH21                        -- -------SPL7<---------ANAC58<------------OsbHLH66<-------MYC2   --------->GLK1(1)    <---------ANAC58 ---------HVH21    <---------TGA1a  ======================bZIP_DOF  ----------->HVH21<---------ANAC58 -ATERF1(1) <---------ANAC58<---------ALFIN1  <---------ALFIN1  <---------GLK1(1)   --------->ATHB12 >NtERF2 --------->SPL7--------->ALFIN1  <---------ZAT2  <------MYB83  <---------DEAR3(1)          --   cgtcggatccgtatgcctgccatgtgtgctgcacgtgtctttcagctcacacgtgagcttggtcacaaatccgacggtgaaactattgagtggctactcc  26220400  Previous    Next  AGI:  At1g69690.1    Description:  TCP family transcription factor, putative. similar to TCP family transcription factor, putative [Arabidopsis thaliana] (TAIR:AT3G47620.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48409.1); contains InterPro domain Transcription factor, TCP (InterPro:IPR005333) Range:  from: 26219887    to: 26221514    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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