Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                ------->TEIL                                                              <-------TEIL          <------ZmHOX2a(2)                               --------------->AtSPL3          ==================HOX2a_HOX2a                 --------->ARR14(2)         --------->ARR11(3)                          <---------ANAC46         <---------ARR11(3)        <---------ICU4    <---------ANAC58        --------->YAB1 <---------ANAC46               --------->YAB1       <---------ANAC58   <-------TEIL ----------HVH21           <----------DOF2       <----------DOF2     <---------ANAC58              <- ---------RAV1(1)         <---------DAG2         <---------DAG2      <---------ANAC58           <---- --ARR11(3)          ------>ZmHOX2a(1)    --------->O2  <---------ARR14(2)  <---------ATHB12 <-------   atgtcgcataagatcgataactccttagcctttttcataatcccatgtctccttttcgtatacgtacattgacgtccattcatgttctgtagtttcttta  26150800                                         --------->YAB1                                        <---------ATHB12                                      ------>MYB46(1)         --------->ZAT6              <---------ALFIN1                                      --------->REM1(1) ---------DOF2       ------>ZmHOX2a(1)------>MYB83                                       ----------->RAV1(1) -----ARR11(3) --------->MYB46(3)   --------->MYB46(3)          ------->GAMYB  --------->MYB52(1) ---DOF2 --------->ANAC46         --------->PCF2  ---------->DOF2            <---------MYB52(2)    --   tctttagcttcactctacccatcctgcataacttatgacccactcatatgaacaaagagaatacaacacacattttgaaactaacaatgagcaacaccaa  26150900                               <---------ALFIN1                              <---------ZAT18                                                 <------                         <---------O2                                                         -------                         ===================================bZIP_DOF                       ------>MYB83                         <---------TGA1a                                                   ------>MYB46(1)                         --------->TGA1a                                                 --------->TOE2(3)                         --------->O2                                                    <---------MYB46(2)                        ------>MYB83                                                     <---------MYB59              --------->MYB52(1)                 <----------DOF2                        --------->ANAC55(2) --------->ATHB12       ------>MYB46(1)     --------->YAB1 <---------AHL20(2)           <---------ANAC55(2) ------->GLK1(2)       <---------ALFIN1    <-------TEIL    --------->AHL20(2)          -------->P<---   gaatcaatggaatagcaaacgatacccacttggccacttcaaagattcatacttttgtcaataaaatccccaagaaggaagagaaaacttacctaattta  26151000                                                            ----------->GT1                                                      <------ZmHOX2a(1)                                               ------>ZmHOX2a(1)                                              --------------->AGL15                                             ----------------->AGL1                           --------->At4g35610<---------------AGL15                         <---------GLK1(2)   <-----------------AGL1                        --------->At4g35610  ----------------->AG              <------ZmHOX2a(1)                        <---------At4g35610  ----------------->AGL3           <----------ID1 ---AHL20(2)          <-----------RAV1(2)    <-----------------AGL2   ----------->GT1               < -->AHL20(2)        ------->TEIL             <-----------------AG ---------->DOF2 ----------->RAV1(1) -------ID1    <---------AtLEC2           <----------DOF2 ---------->DOF2  ---------->DOF2  ---------   agacaaaacaaaactttccatgaatcagatgctgaacataaaaactttccttatgaggaagaaagaaaaaaagagagaaaaggacaacaaaaaaaaacag  26151100                                                  <---------WOX13(1)              <------MYB46(1)                                                --------->ATHB12                <--------P   <---------HSFB2a(2)                         <---------YAB1                  <-------GAMYB   --------->HSFB2a(2)                    --------->ANAC55(2)                <---------TOE1(3) ----------DOF2                           <---------ANAC55(2)                <---------TOE2(3) >MYB52(1)                 <------ZmHOX2a(1)   --------->ICU4  --------->AHL20(2) <------MYB83   agcttttggaaacgaagagagattgtgaaggagagagaagaaataggtattgattgggagaccaaaaaaatcggaaattagggttggaagctagagacta  26151200                                                                             <------------CBF                                  *TSS        ----------->GT1               --------->ATHB12                                <---------MYB52(1)                         <---------YAB1                    <---------AHL20(2)  --------->ANAC46          <----------DOF2                   <                  <---------MYB52(1) <---------ZAT14           --------->ANAC46     <---------ALFIN1-          ------>ZmHOX2a(2) <---------At4g35610             -------->P     <---------AHL20(2)      -- <---------ARR14(2)--------->AHL20(2)--------->ZAT14--------->MYB52(1)<----------DOF2  <---------ATHB12   gggaatttgggatcgtttccattaattttcatctgttacttcacagaacagaaacaacgacttacccgctttctttttttattggaccactcatttgggc  26151300                                              <-------MYC3                                              ------->MYC3                                              <-------MYC2                                              ------->MYC2                                             --------->ANAC55(2)                                             ======================MYC_MYB                                             <---------TGA1a                                             <---------O2                                             <---------ANAC58                                             <---------ANAC58                                      <---------O2                                      --------->O2                                           ========                                   --------->TOE2(2)                                        <------ZmHOX2a(2)                                   --------->DEAR3(1)                                      --------->ARR11(3)                                   ------->GAMYB                               <-----------RAV1(1) <-                                   ====================MYC_MYB                 --------->ALFIN1------                                  <---------MYB55(2)                        ========================HOX2a_HOX2a                                  --------->DEAR3(2)                        =======================HOX2a_HOX2a                                  <------------AtMYB77                      <------ZmHOX2a(1)------>ZmHOX2a(2)                                  --------->MYB46(3)                      <---------TOE1(2)<---------ARR14(2)                                  =====================MYC_MYB            <---------TOE2(2)<---------AGP1                                 ======================MYC_MYB           --------->HSFB2a(2)=========       ----------->GT1           -------->P  --------->TGA1a             <---------HSFB2a(2)---------     ---------->DOF2            --------->MYB52(1)      ---------->CDC5  ------>ZmHOX2a(1) --------->ARR14(2)     ==================================================bZIP_DOF          ==========================HOX2a_HOX2a    --------->AtMYB61     <---------HSFC1(2) --------->O2                ===========================HOX2a_HOX2a ------->GAMYB            --------->HSFC1(2) <---------ANAC55(2)        --------->TOE2(2)  --------->AGP1 ---------MYB55(2)   --------->HSFB2a(2)   <-----------GT1              --------->TOE1(2)  <---------ARR11(3) -------->MYB46(3)   <---------HSFB2a(2) <-----------HVH21        <---------ANAC58        <---------CCA1(2) ------>P  --------->WOX13(1) <---------MYB52(2)<-----------HVH21 <---------ANAC58       ----------->ARR10   taaccaccaaagtaaatcagttactagaagctactaaccgacgtttcacgtgtcaagctcatcgggtttcgtttcctaggaatgtggcacttagatctga  26151400            --------->ARR14(2)            <---------ARR14(2)            --------->MYB52(1)                                 --------->ATHB12           ----------->HVH21                                  --------->ICU4          <---------RAP2.6(3)                             <-------MYC4          <---------SPL7                                  ------->MYC4         <---------ANAC46                                 <-------MYC3         --------->ANAC55(2)                              <-------MYC2         <---------ANAC58                                 ------->MYC2         <---------ANAC58                                <---------TGA1a         <---------ANAC55(2)                             ============================================bZIP_DOF         <---------bZIP60(1)                             <---------ANAC55(2)        <------NtERF2                                    --------->O2       ------>NtERF2                                     --------->ANAC55(2)    <------MYB46(1)                                      --------->TGA1a    <------MYB83                                         <---------O2   <---------AtMYB61               <-------GAMYB       <---------ALFIN1   --------->ALFIN1                ================================MYC_MYB <------ZmHOX2a(1)             --------->MYB52(1)     <---------REM1(2) =======HOX2a_HOX2a        ------->TEIL             <---------ETT(2) --------TOE2(3)        --------->ANAC58            --------->ETT(2)                      =========== --->At4g35610 ------->GAMYB  <---------SPL7   --------->SPL7 <---------YAB1              <----------DOF2 =======HOX2a_HOX2a     --------->ANAC58  --------->GLK1(2)--------->ALFIN1        <---------MYB52(1) >CCA1(2)--------->bZIP60(1) <---------DAG2 --------->YAB1------->MYC3        <-----------GT1   tgaggatggtgccgtaacggcgaactaagcaccttacggttgagaatcatacggtctacacgtgttgattagttttatataaaccgttgtttcttttgtt  26151500        ------->MYC3                                                                          <------        <-------MYC2                                                                         --------        <-------MYC3                                                                         <-------        ------->MYC2                                                                         <-------       <---------TGA1a                                                                      <--------       <---------ANAC46                                                            <------MYB83       <---------ANAC58                                                            ----------->GT1       --------->TGA1a                                                        <---------RVE1(1)       --------->O2                                                           <---------CCA1(1)       --------->ANAC55(2)                                                   <---------ARR11(3)       <---------ANAC55(2)                                                   --------->ARR11(3)       <---------O2                      <---------------AtSPL8      --------->ATHB12  ---------->DOF2       <---------ANAC58              <---------ANAC46 <---------YAB1 <---------ICU4<------MYB46(1) ================bZIP_DOF--------->MYB46(3)        <---------YAB1   <---------YAB1--------->MYB59   ttatatttcacgtgtgttttttcttgaaccatctatgttttgtatagtacatgcttattagtatgttttgatgatttcagatatttggtaaaagagattt  26151600                                                                  <---------ANAC46                                                                 <------NtERF2          --------->AHL20(2)                                    <---------MYB46(3)          <---------AHL20(2)                                   --------->ALFIN1    <----------ID1                                             <---------ANAC46                ------    ----------->GT1                  --------->ATHB12        <------MYB46(1)                   ------  ---------->DOF2                   <---------YAB1           <---------MYB46(3)                ------ ---RVE1(1)                <---------HSFB2a(2)               <------MYB83                    ------->GAMYB ->ARR11(3)             <----------DOF2                     <---------AtMYB61               --------- --GLK1(2)--------->AHL20(1)      ----------->GT1        <-----------RAV1(1)               --------->ANAC58 --ARR11(3)       <-------TEIL---------->DOF2      <---------GLK1(1)                       --------->ANAC58 -RVE1(1)--------->AHL20(2)--------->HSFB2a(2)     --------->GLK1(1)    --------->YAB1    --------->WOX13(1)   ttaaaaaagaaaaaaattggttcatacttttagaaagtgtgattagaaactggatttctatgttggtgggggattaataagcctgtatttgtcaaccaag  26151700  Previous    Next  AGI:  At1g69540.1    Description:  AGL94; DNA binding / transcription factor. similar to AGL30 [Arabidopsis thaliana] (TAIR:AT2G03060.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO64535.1); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100) Range:  from: 26148707    to: 26151234    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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