Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     <------ZmHOX2a(2)                 --------->ARR14(2)                  <---------ARR14(2)                 <---------ARR14(2)                  <-----------ARR10                  ------->TEIL                  --------->ARR11(3)       <---------TOE2(3)    --------->MYB52(1)                     <---------TOE1(3) --------->ANAC55(2)                   <----------DOF2 <---------ANAC55(2)------>ZmHOX2a(2) <---------ANAC58                      --------->ANAC58 --------HVH21    <---------ARR11(3)  <---------ANAC46         <-------TEIL --------->ANAC58 ->ZmHOX2a(1)     --------->ARR14(2)  <---------ANAC58  <---------HSFB2a(2) --------->ANAC46        -   gtcaagtatcggatgatgacgatcttatccatggctcatggcttgaaggttactgtatccagacgttcatagacacacacacaaaaaaaaaaaaaaacta  26129600                                             --------->ARR11(3)                                             <---------ARR11(3)                                          <---------AHL20(2)                                          --------->AHL20(2)                                         <---------AHL20(2)                                         --------->YAB1                                     <---------AHL20(2)                                     <---------YAB1                                     --------->AHL20(2)                                   --------->CCA1(2)              --------->HSFB2a(2)     <---------AHL20(2)                                  <---------ARR11(3)     --------->ARR11(3)              --------->AHL20(2)                                  --------->ARR11(3) <-----------GT1              ----------->GT1<--- --------->DOF2         ------>ZmHOX2a(2)--------->AHL20(2)       <---------HSFB2a(2)--------->AHL20(2)   tacaaagtcaaatccatttgaaatgatccaagaagagatataattaaaatctttataactatcttgttctaaaacttctccataagataaattttataga  26129700                                               --------->AHL20(2)                                               <---------AHL20(2)                                              --------->AHL20(2)                             <------ZmHOX2a(2)                                              <---------AHL20(1)                        <---------ATHB12                                         <---------MYB52(1)                            ------>MYB83--                                 <-----------GT1                                       ------>MYB46(1)                             <----------DOF2  --------->AHL20(1)                  <-----------GT1  <-                         ---------->ID1<---------ANAC55(2)                 <----------DOF2 --------->At4g35610                         <-----------GT1--------->LBD16               <---------At5g28300--------->YAB1                        <-----------GT1----------->GT1       <---------AHL20(2) <-----------HVH21 --- ---ZmHOX2a(2)----------->GT1<---------DAG2   <---------AHL20(2)     <-----------GT1  --------->WOX13(1)   tcaaacaacaattgtgaggcaaattttttccctttttactcccgtaaatttaatttcttatatttcattttttaccgctctatgtcaccaatcagatcaa  26129800                                      <---------YAB1               ----------->GT1      --------->AHL20(2)         <---------ALFIN1            --------->ICU4          --------->YAB1            --------->ANAC46    --------->ATHB12            --------->AHL20(2)          <-----------GT1 ------->AHL20(2)              --------->AHL20(2)    --------->HSFB2a(2)                           <- --------AHL20(2)              <---------AHL20(2)    <---------HSFB2a(2)               --------->ZAT6 ------>AHL20(2)           --------->AHL20(2)       <-------TEIL         ---------->DOF2           --   attaatcgattggaataatgtgaatacaagtatataaattataaaaccagaaggtccagaattcaccacattgtttaaagtcaacatgaacactaataga  26129900                  ----------->TBP                --------------->AGL15                <---------------AGL15               ==============================================================================MADS_MADS               <-----------------AGL2               ----------------->AGL2                  <---------ATHB12               <-----------------AGL3              ------------>CBF         <------ZmHOX2a(1)   <----------DOF2       <-----------------AGL1   <----------DOF2      ----       <---------TOE2(3) <---------GLK1(2)       ---------->ID1            <-----------------AGL3<--- --------ICU4  ----------------->AGL3       <---------ARR14(2)   <---------ALFIN1    ---------->DOF2 ------->YAB1<------ZmHOX2a(1)          <------ZmHOX2a(1)---------->DOF2------>ZmHOX2a(1)      ------   aacatgactaaggaaggactatatatggaatctttttgtataggaatatttggcccaattaaggcccaaacctcctctctttttttgaaaagaagagaat  26130000                                                                                          --------->LBD16                                                   --------->AHL20(2)          <------ZmHOX2a(2)                                                  <---------AHL20(2)          --------->ARR14(2)                                                  --------->AHL20(2)          --------->AGP1                                             --------->LBD16               ------>ZmHOX2a(2)                                            --------->HSFB2a(2)           --------->CCA1(2)                                            <---------HSFB2a(2)           <------ZmHOX2a(2)                                           <---------LBD16                --------->ARR14(1)       <---------MYB52(1)                --------->ARR14(2)              <---------ARR14(2)         -      <----------DOF2                    <---------ARR14(2)        <-----------GT1       --------->LBD16     <---------ANAC46                   --------->ZAT2 <---------ICU4    --------->ARR14(2) <-------- --------->At4g35610                    <---------At4g35610     --------->YAB1<---------ARR14(2)   <- ----->ARR14(2)                         --------->At4g35610   --------->AHL20(2)  --------->At4g35610 ------ARR14(2)       <-----------TGA1  <---------ZAT2 --------->YAB1    <---------ARR11(3) --------- --->GLK1(2) *TSS   <------NtERF2   --------->ALFIN1  <---------AHL20(2) --------->AGP1 <---------LBD16   atttgctgcgttaagttgaggcatcgtcatcgtgaaatgtgcagctccggaaataaataatcactaaaataaccagatccgatctactgccccggtttct  26130100                               <----------DOF2                             <---------------AGL15                             ------>ZmHOX2a(1)                          <------ZmHOX2a(2)                         <---------ARR14(2)                    --------->TOE2(2)                    ------->GAMYB    --------->ARR14(2)   --------->ARR14(2)   <---------GLK1(2)--------->TOE1(2)   --------->ARR14(2)   --------->GLK1(1)   <---------ARR14(2)--------->LBD16                          <-----------GT1  <------NtERF2    --------->DEAR3(2)                      <---------AHL20(2) --------->LBD16   <------------AtMYB77                   <---------AHL20(2) -------->LBD16    --------->MYB46(3)                     <---------AHL20(1)                      --- -ARR14(2)       --------->ARR14(2)                 --------->AtMYB61   <----------DOF2          <--- --------LBD16   <---------ARR14(2)      <-----------GT1  --------->AHL20(2)                    <---- >ARR14(2)      ----------->HVH21  --------->HSFB2a(2)    --------->AHL20(1)   <----------DOF2 <-----   cgccggaatctccattctgtaaccggcgatcctctttctggtataactcttccaccaaaatttatttccgattactttctcctttcttcttgttgatttt  26130200                                                                                              ------>ZmHOX2a(2)                                                                                             <<<<<<<<                                                                                             <<<<<<<<                                         <----------DOF2                                     <<<<<<<<       <---------YAB1                   <---------ANAC58                                     <<<<<<<< ------>ZmHOX2a(1)                   <---------MYB52(1)                                      <------ZmHOX2a(2) <----------DOF2                   <-----------RAV1(1)                                      <-------- ------->ID1            <---------DOF5.7(2)         <---------AHL20(2)                      --------- --------GT1       --------->HSFB2a(2)  <---------ANAC58                                    <-------- -------GT1 --------->YAB1 ----------->GT1         <---------AHL20(2)    <---------YAB1    <---------CCA1(2) ----AHL20(2)      <---------HSFB2a(2)  <---------ANAC46     --------->GLK1(1)           --------->HSFB2a(2)   atccttttgatcattcatgttcgagtaaacgataaaactgttgcttgaagttttttaatggcgatttctaatgtgatgttagagtctatgtctagatctc  26130300     --------->CCA1(2)     --------->ARR14(1)    <---------ARR14(2)    --------->ARR11(1)                                   <---------------AtSPL8    --------->ARR14(2)                                   <---------------AtSPL3    <---------GLK1(2)             <----------DOF2    --------->ATHB12  <---------YAB1                  <---------DAG2   <---------WOX13(1)  <---------TOE2(3)    --------->LBD16           -------->HAHB4 <GATA-4              <---------LBD16            --------->ATHB12 <GATA-2              <---------ANAC46           <--------ATHB1 <GATA-3         --------->ARR14(2)              <---------ICU4            <---------TOE2(3) <GATA-1         <---------ARR14(2)             --------->ICU4      --------->ANAC55(2) -ARR11(3)--------->ARR14(2)  --------->ZAT18   <---------ATHB12    <---------ANAC55(2) >ARR11(3)<---------ARR14(2)  <---------ZAT18   <---------YAB1 <---------ZAT6                    ---- -AGP1<-------TEIL   <---------LBD16           <---------TOE2(3)--------->YAB1    ------->TEIL   <---   tattaagattcgaatactgaattcgcgggaagtggacttttttgtttctaatgattgatttagtactgataagtgataacgatgtatatagtttttgttc  26130400                                                  ---------->DOF2                                                ----------->HVH21                                              ===============bZIP_DOF                                              <---------ANAC46                                              <---------ANAC55(2)                                              <---------TGA1a                                              <---------O2                                              --------->O2                                       --------->HSFB2a(2)           <---------TOE2(3)                                       <---------TOE2(3)       --------->ICU4                                       <---------HSFB2a(2)     <---------YAB1                           =============================bZIP_DOF    --------->YAB1                           ---------->DOF2   <-----------------------TaNAC69(2)                   <-- ----->HSFB2a(2)    <----------DOF2 <---------MYB52(1)     <------ZmHOX2a(1)   ------>ZmHOX2a(1)  --- ------HSFB2a(2)    ====================================bZIP_DOF--------->ATHB12                <----   tggacttgaatttgaaaacatacttttgttaaagctcagttatggaagacgtgaaagggaaggagattattgatgatgctcctattgacaacaaggtttc  26130500  Previous    Next  AGI:  At1g69500.1    Description:  oxygen binding. similar to CYP704A2 (cytochrome P450, family 704, subfamily A, polypeptide 2), oxygen binding [Arabidopsis thaliana] (TAIR:AT2G45510.1); similar to hypothetical protein OsI_009935 [Oryza sativa (indica cultivar-group)] (GB:EAY88702.1); similar to putative plant cytochrome P-450 protein [Oryza sativa (japonica cultivar-group)] (GB:AAL84318.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48359.1); contains InterPro domain Cytochrome P450, E-class, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) Range:  from: 26127603    to: 26129720    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g69510.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G64130.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN80447.1); similar to unknown [Populus trichocarpa] (GB:ABK94521.1); contains InterPro domain Lg106-like (InterPro:IPR012482) Range:  from: 26130013    to: 26131624    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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