Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                            --------->At4g35610     <-----------RAV1(2)                                 ------->GAMYB   --------->TOE2(3)             --------->ANAC46       --------->MYB46(3) -------->ARR14(2)    --------->At4g35610               <---------MYB55(2)                    ------- ---->GAMYB           <---------ZAT14         --------->At4g35610                            <------- ----->ANAC58         --------->ZAT14         ----------->RAV1(2)                            <------- ----->ANAC46        ------->GAMYB            <---------At4g35610                           <-------- ----->ANAC58       --------->MYB46(3)      <-----------GT1  --------->LBD16     ------->TEIL<------- --->MYB52(1) --------->YAB1     --------->ANAC58      <---------At4g35610       --------->ARR14(2) >ANAC46     <---------YAB1      --------->ANAC58    --------->REM1(1)        ------>ZmHOX2a(1)  ----   cgaaacctcaggcttatgatcaacagcagtgaaacaagccatgtaatcacctgcttcaacagccgagaatgcgaattgtcctgaatctacttgttccgcg  26116500                        <-----------TGA1                        <-----------HVH21                       --------->bZIP60(2)                       --------->bZIP60(1)                       <---------O2                                                              ----                       <---------TGA1a                                                          -----                       --------->TGA1a                ------>ZmHOX2a(2)                         <----                       --------->ANAC58              <------ZmHOX2a(2)              --------->ICU4      --------->ICU4   --------->O2 --------->YAB1  --------->AGP1             <------MYB83    <-----   <---------YAB1      --------->ANAC58             <---------ARR14(2)         ----------->GT1 ------ -->LBD16              --------->ANAC46             --------->ARR11(3)         <------MYB46(1) ------ --ANAC46   <---------LBD16         --------->ANAC46--------->ARR14(2)        --------->MYB59  <----- --ANAC58  --------->MYB52(1)       --------->ANAC55(1)                <-----------------AG    ------ -LBD16<---------ICU4 <-----------STF1              <---------ARR11(3) <-----------------AGL1  <----- --ANAC58 <-----------GT1--------->TGA2(2)          <---------AGP1    <-----------GT1        -------- ------->HVH21--------->LBD16 <-----------HVH21    <---------CCA1(2)<---------AHL20(2)     ----------   tgatggtaattgttaccggaattagacgtcaccttcacacataaccaaaactcagatctatggacaaaattttaacaaattaggtcaaaattagaaagat  26116600       --------->TOE2(3) -->ZmHOX2a(2) ---->CCA1(2) --ZmHOX2a(2) ----AGP1 <---------WRKY18(1) --->AGP1----------->HVH21                                                        --------->ATHB12 --->ARR11(3)                                                                  ------->GAMYB ----ARR14(2)                                                                 --------->MYB46(3) --->ARR14(2)                                         <------ZmHOX2a(1)      ------>MYB83    <------- ----ARR11(3)                                   <---------ANAC46             ------>MYB46(1)<-------- --->ARR10--------->MYB52(1)              <---------WRKY18(1)               ----------->RAV1(1) >DOF2 --------->TOE1(3)           ---------->DOF2   --------->ICU4     <-----------GT1     <--------   ctgtgtttaccttgacggaaattttgtgagtttgtggtaaagcttgaccttcgtgaggattatcgatgttgtatttaccaacagtcattgaattgctttt  26116700                         <---------O2                         <---------ZAT2                         --------->O2                      ----------->HVH21     <---------DEAR3(1)<---------PCF2                                      --------------->AGL15 ---DOF2        <----------DOF2             ---------->DOF2          ------>MYB83     --------->HSFC1(2) -ANAC58  <---------ARR14(2)    <---------ZAT14     <---------ZAT6   ------>MYB46(1)  <---------HSFC1(2) -ANAC58  --------->ARR14(2) <---------ANAC46       ----------->GT1<---------MYB59    <---------HSFB2a(1)   gatgtcttcggcgatacactttgtgcgacctgagtgtagatcgaagtgaagcgagtgtgaaattggtgaccaaatcgctagaattagaagcatcgtccat  26116800                                            ------->TEIL                                         ----                                            <---------ARR11(1)                             <---------ZAT2                                           <---------CCA1(2)                              ------->TEIL                                           <---------ARR14(1)             ------>ZmHOX2a(1)--------->ZAT2                                           <---------GLK1(2)      <---------ANAC58     --------->ANAC46                                      --------->GLK1(1)           <---------ANAC58--------->REM1(2)                                 --------->LBD16             <----------DOF2     <---------ANAC46----   agtttttgcgattggagaaacatttttgaaaaatccagagaaatcgaatctctcttcgtcttccttttgcttcttcctcgattgtgtagacgaagctcga  26116900                        --------->ARR14(2)                        <---------ARR14(2)                    <-------MYC4                    ------->MYC4                    ------->MYC3                                                              -------                    <-------MYC2                                                              <------                    ------->MYC2                                                            <------MYB83                    <-------MYC3                                                            <------MYB46(1)                   --------->O2                                                        --------->ATHB51                   --------->TGA1a                                                     <---------AHL20(2)                   <---------TGA1a  ----------->GT1                               --------->LBD16                   <---------O2  <------------CBF                                 ------>ZmHOX2a(1)                   <--------ABF1--------->ATHB12                  --------->At4g35610  --------->ATHB12                   <---------ANAC55(2)                            <---------At4g35610  --------->AHL20(2)      *TSS         <---------ANAC46 <---------MYB46(3)      --------->At4g35610<------ZmHOX2a(2) ------->TGA1      --------->ANAC55(2)                 --------->ZAT18        <---------ARR14(2)  <-- ------->HVH21----------->HVH21<---------AHL20(2)      <---------ZAT14        --------->ARR14(2)  ---   tgacgatgcaagtgttttgacacgtgtatatgttttattggttaaaacacataagtgtgaacagcttcagattacaaaccgatcctgaattatttggttc  26117000                                             <---------TOE2(3)                                      <---------ANAC58                                      <---------ANAC46               <------MYB46(1)        <---------ANAC58               <------MYB83       <---------ANAC58              <---------AtMYB61   <---------ANAC58      <---------AtMYB61      <-----------GT1            ------>ZmHOX2a(2)   <---------MYB52(1) -->ARR14(2)  --------->MYB59    =====================HOX2a_HOX2a<----------DOF2        ------------- ---ARR14(2)<---------MYB52(1)  <---------YAB1  --------->ARR14(2)              <----------DOF2  ---- -------At4g35610          <---------ANAC55(2)  <---------ARR14(2)          <-----------GT1 <-------TEIL ------>At4g35610          --------->ANAC55(2) <------ZmHOX2a(1)--------->TOE2(3)       <------------   tgcttaataaaccggtttggtttagcattatgtgatccttgcgtcttaaggaaccggtatggtttacctttgtgtaaatttcctttttttagggtacaaa  26117100         <----------DOF2        <---------HSFC1(2)        --------->HSFC1(2)        <---------HSFB2a(1)                                  <---------MYB59        --------->HSFB2a(1)                                 <---------ANAC55(2)      <-----------ARR10                          ------->GAMYB      <---------ARR14(2)                        --------->MYB46(3)     <---------ANAC58       <------      --------->ARR14(2)                      --------->MYB52(1)       <---------ANAC58       <------ -->AtSPL8            <-------GAMYB    ----------->GT1      --------->ANAC55(2)               ------- ----->AHL20(2)      ----------->GT1 ---------->DOF2     <---------MYB52(1)                   <------ ---AtSPL8    <----------DOF2   ---------->DOF2 <---------MYB52(2)<----------DOF2             <------   aaaatgcagaactttccttttctcggttaaaaaaaaaaggaaagtaaacaacgaacaccattacttaactttggagtgagtttctaatactgagttactt  26117200       ------->GAMYB    <---------ARR14(2)    --------->MYB52(1)    --------->ARR14(2)   ----------->HVH21 --------->RAP2.6(2) <---------ANAC55(2)     <---------ANAC58 --------->ANAC55(2)     <---------ANAC58                                      <---------------AGL15 ---ANAC58             <---------YAB1                                 --------->ZAT14 ---ANAC58           --------->YAB1              --------->MYB52(1)   <---------ZAT14 -->ANAC55(2)   <------ZmHOX2a(2)                <-----------GT1      --------->REM1(2)           --- ---ANAC55(2)  --------->ARR11(3)         ---------->DOF2          <---------ZAT6                 <-- ---ANAC46     <---------ARR11(3)  ----------->GT1             <---------MYB52(1)           <------ZmHOX2a(1)   gagccgtaaccgtaagagatcattcatgcttgagagaatgtcaaaaaagattaacgagcttcttcgttactgtgaagagaactatattgagagaggaagt  26117300                                                                           <---------At4g35610                                                                           --------->At4g35610                                                                           ------>NtERF2                                                                          --------->DEAR3(1)       <-                                                                         --------->ATERF1(1)       <-                                                                         --------->DEAR4(2)        --                                                                         <------NtERF2            ---                                                                         --------->RAP2.3(1)    <----                                                                        ------>NtERF2           <----                                                                        <---------ATERF1(1)     -----                                                                        <---------RAP2.3(1)     -----                                                                       --------->DEAR3(1)      ------                                                                     <-----------HVH21        -------                                                                    <---------TGA1a           <------                                                                    --------->ANAC58          -------                                            ------>ZmHOX2a(1)       --------->ANAC46          <------                                          ----------->RAV1(2)       --------->bZIP60(2)      --------                                        --------->ARR14(2)          --------->O2    --------->ARR14(2)                                        --------->GLK1(2)           --------->ANAC58<---------ARR14(2)                                        <---------ARR14(2)          --------->TGA1a --------->GLK1(2)                                       <---------ARR14(1)           <---------O2--------->HSFB2a(2)--                                 =============================================bZIP_DOF  ------>ZmHOX2a(1) ------>HSFB2a(2)                ---------->DOF2     ------>ZmHOX2a(1) <---------DEAR3(1)  ---------- -------HSFB2a(2)         --------->WOX13(1)----------->HVH21     <---------ALFIN1 <---------GLK1(2)   ctcgaacttgcattacgatgtgctgtttcaatctgcaaagcgaatcctgacgctcctcaagcttatgcacacgtcgccgcttacagaatccttttgacgg  26117400  Previous    Next  AGI:  At1g69460.1    Description:  emp24/gp25L/p24 family protein. similar to emp24/gp25L/p24 family protein [Arabidopsis thaliana] (TAIR:AT1G26690.1); similar to unknown [Populus trichocarpa] (GB:ABK93105.1); contains InterPro domain emp24/gp25L/p24; (InterPro:IPR000348); contains InterPro domain GOLD (InterPro:IPR009038) Range:  from: 26115472    to: 26116906    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g69470.1    Description:  unknown protein Range:  from: 26117238    to: 26117660    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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