Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       --------->At4g35610                     <------NtERF2                     <---------At4g35610                    <---------ATERF1(1)                    <---------DEAR3(2)                   --------->ETT(1)                   <---------DEAR3(1)                  <---------ORA47(1)                  --------->RAP2.6(3)                      --------->YAB1          --------->TOE2(3)             <---------ZAT2                         ----------->GT1               --------->MYB46(3)     ----------->HVH21                         <---------ANAC46              <----------DOF2 ------At5g28300 <-----------HVH21          --------->GLK1(2)    <---------AHL20(2)------->GAMYB -------GT1  --------->ZAT2             <-----------GT1 --------->WOX13(1)   --------->TOE2(3)   actgtgtttgacacgagctggtcggctcaacctattttagtttcacattctgtgaagttaatcatattcaattgcaatactttaaccacaaactatataa  26090200                                                                                       --------->ARR11(3)                                                                                       --------->AHL20(1)                                                                                       <---------ARR11(3)                                    <---------------AGL15                              <---------AHL20(1)                    --------->ZAT18----------------->AGL2                             <---------AHL20(2)         --------->YAB1        --------->ANAC46                   -------->P      --------->AHL20(2)        <---------ATHB12 <---------MYB46(3)                ------->TEIL           <---------AHL20(2)      --------->WOX13(1)<---------ATHB12                  <---------GLK1(2)     --------->YAB1      <   gttaaactcaatcaaaatatggtgcaatggttcccatcacaaaaatagaaatggactattgaatctcttacctgttcgactaaaataaatattttcaaac  26090300                                                 <------ZmHOX2a(2)                                 --------->CCA1(2)                                  --------->DOF5.7(2)                                <---------ARR14(2)                                 <----------DOF2                                --------->ARR14(2)------>ZmHOX2a(2)                --------->TOE1(3)                  <---------RVE1(1)              <-----------------AGL1            --------->TOE2(3)                 <---------ARR11(3)             --------->ARR14(2)              <-----------GT1                 --------->ARR11(3)          --------->MYB46(3)              --------->YAB1                 <---------GLK1(2)<-------TEIL  <---------ARR14(2)       --------->AHL20(1)        <---------HSFB2a(2) ------>MYB46(1)--------->MYB52(1)            --------->AHL20(2)        --------->HSFB2a(2) ------>MYB83--------->ANAC58                 <---------AHL20(2)     <---------YAB1    <-----------GT1  --------->ANAC46                <---------AHL20(2) ---------ARR11(3)<---------CCA1(1)     --------->ANAC58                --------->AHL20(2)   aagaactgttatagaacaagattttttacctacagatacagaacgcaaccgatccgaaatggacatgcctaaaattaaattataactttaactaaatccc  26090400                              --------->ARR14(2)                            --------->LBD16                          <---------LBD16                        --------->ARR14(2)                        <---------ARR14(2)                      ---------->DOF2                 ------->TEIL <---------ARR14(2)              <---------MYB52(2)                                            <---------ARR11(3)    ---     --------->MYB52(1) --------->GLK1(2)                ---------->DOF2    --------->ARR11(3)   <---   aaaacacaaaccgaaaacgaaccaaaaatccggatttatcatctacgactacaaacattcaaagtagtatgtacaatagatattgggccataagcccatt  26090500                                    ---------->DOF2                              ---------->DOF2                        <-----------RAV1(2)                               <------------CBF   <---------MYB52(1)--------->At4g35610--------->ARR11(3)            ----------------->AGL1 ----->P        ---------->DOF2 <---------LBD16                    --------->GLK1(1)          <------ --------GT1  <---------YAB1 <------------CBF                 <---------LBD16<---------LBD16  -------   aacccgtttgtgaattttgaaagagctcaggtattggggaaagctctagtctacaaatttgaaattcggaattcgaaattggggaaagtcttcttcatct  26090600            <-------GAMYB<---------DOF5.7(2)          <---------ANAC46          <---------ANAC58                         <------ZmHOX2a(1)          <---------ANAC58<---------TOE2(3)      <---------TOE2(3)       --------->ALFIN1  --------->MYB52(1)  <---------ANAC46     --------->ALFIN1   *TSS                 <---------ANAC58 ---At4g35610        <---------TOE2(3)       <---------ANAC58                             <---------At4g35610 -->At4g35610  --------->ATHB12         <---------ICU4       <-----------RAV1(1)          --------->At4g35610   gtctagagagtggcgtttgatttgagataacgttcttctccaaaattgcttgaggaagtggttttgttgtgtctctctgggtttgaaatatgagcggaga  26090700                                                <-----------GT1                        --------->GLK1(2)                                              --------->GLK1(2)                       <---------GLK1(2)                                   <---------ANAC58                                   <---------GLK1(1)                                   <---------ANAC58       <---------ATHB12            <---------ARR14(2)                                --------->ARR14(2)      --------->WOX13(1)            --------->ARR14(2)                                <---------ARR14(2)   --------->ANAC46         <----------DOF2                          <---------ARR14(2) <---------ARR14(2)              <---------ANAC58                          --------->ARR14(2) --------->ARR14(2)              <---------ANAC58                         <------ZmHOX2a(1)   <---------GLK1(2)               <---------ANAC46                --------------->AGL15      ----------->ARR10           ------>ZmHOX2a(1)         <---   tagacttgaatttgaaaaccctatagaggatgcggtttcgaggctcagattctcccctcaatcaaacaatctcctcgttgcttcttgggattctgtgagt  26090800                          ------>ZmHOX2a(2)                              <---------ANAC46                         <------ZmHOX2a(2)                           <---------ANAC46                        <---------ARR14(2)                           <---------ANAC58                        --------->ARR14(2)                       <---------ANAC46                    <---------HSFB2a(2)                          <---------ANAC58                    <---------LBD16                              <---------ANAC58      --------->GLK1(2)             <----------DOF2         <---------AtMYB61      <-----------RAV1(1)        --------->ARR14(2) --------ARR10      --------->HSFB2a(2)             ----------->TGA1 <---------ANAC58  <---------ARR14(2)   ttcttctcttctcttcttttttctcggatcgataccgtattggtctcagagatagtgacgaattgttgcttgcttgtgtaaatgtgtagtatctgagatt  26090900                                                                   --------->HSFC1(1)                                                                   <---------HSFB2a(2)                                                                   --------->HSFB2a(2)            <---------ARR11(3)                            <---------MYB46(3)            --------->ARR11(3)                         --------->ATHB12     --------->ALFIN1                      <---------At4g35610    <---------ANAC46   <---------bZIP60(2)                     <---------ZAT2<---------WOX13(1)   <---------ANAC46             --------->AHL20(2)    <---------YAB1       ------->TEIL            <-   gtatgatgtggagagctcttcgctaagtcttgaattaaactctcaagctgctcttcttgattgttgtttcgagaatgaatcaacttcatttacctctggt  26091000                                                                                   --------->ARR11(3)                                                                                   <---------ARR11(3)                                                                                ------>ZmHOX2a(2)                                                                               --------->CCA1(2)                                                                               <------ZmHOX2a(2)                                                                              <---------ARR14(2)                                                                              <---------ARR11(3)                                                                              --------->AGP1                                                                              --------->ARR14(2)                                                                              <-----------ARR10                                                                              <---------AGP1                --------->HSFB2a(1)                                    --------->YAB1------>ZmHOX2a(2)                <---------HSFB2a(1)                                   <---------ATHB12       <-------TEIL             <----------DOF2                <----------DOF2--------->ARR11(3)  <---------WOX13(1)       <-----------GT1                 <-----------GT1---------->DOF2        ---- --------YAB1--------->LBD16    <---------DAG2 <---------YAB1 <---------DAG2 --------->RVE1(1)  <----   tctgatggattcatccgaaggtttgcaattttcgcttttctattgtatgaagatagcaaatttaccttttcaatgaaaaagatctgatcttgtatagaat  26091100  Previous    Next  AGI:  At1g69390.1    Description:  ATMINE1 (ARABIDOPSIS HOMOLOGUE OF BACTERIAL MINE 1); protein binding. similar to plastid division regulator MinE [Brassica napus] (GB:AAZ23773.1) Range:  from: 26088298    to: 26090144    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g69400.1    Description:  transducin family protein / WD-40 repeat family protein. similar to WD-40 repeat family protein / mitotic checkpoint protein, putative [Arabidopsis thaliana] (TAIR:AT1G49910.1); similar to unknown [Populus trichocarpa] (GB:ABK92875.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain WD40 repeat (InterPro:IPR001680) Range:  from: 26090624    to: 26092683    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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