Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)       ---------->DOF2 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                     --------->ARR11(3)     <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                          <---------ARR11(3)     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                    ---------->DOF2   <-----     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)<---------ANAC58           <---------YAB1<------ZmHOX2a(2)<x     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                         <---------AHL20(1)          ------ ------->O2<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                    --------->AHL20(1)       --------- ---->MYB46(3)        <---------CCA1(2)  <---------ANAC58          <---------ARR11(3)      <---------AHL20(2) -----GT1<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)     <<<<<<<<<GATA-1  --------->ARR11(3)     --------->AHL20(2)   cacttgactaaaagcacatctctcaaatctaaaaactacttattcgtggtttatctataaaacttgaaatatttttgtcaaaagatcatatttttaataa  26087900                              <---------RVE1(1)                              --------->GLK1(1)                              <---------CCA1(1)                             <---------ARR14(2)                             --------->ARR14(2)                          <---------TOE2(3)                          <---------ANAC46                                   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                         <---------LBD16                                     --------->ARR14(2)                      <----------DOF2                                  --------->WOX13(1) ----AHL20(2)        <---------ICU4                             <-----------GT1            <---------ICU4 xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                         <---------ICU4  <---------ARR14(2)   <-- --->AHL20(2)       --------->ICU4                    <----------ID1 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) >YAB1    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)     ---------->DOF2  --------->ANAC46      --------->ICU4   aacagcaagaatgcaaatagtcatctttacggatattttgttagattgaagtttaaagaacaaatattacaatccatcaaatctgaaaactacttattag  26088000          <---------ANAC46          <---------ANAC58          <---------ANAC58   ----------->GT1       <--------P <----------DOF2                                    --------->TOE2(3)      <-------GAMYB        --------->YAB1                    --------->HSFB2a(2)     <---------MYB46(3)   <---------ATHB12                   <---------HSFB2a(2)    <---------TOE2(3)     <---------ATHB51               <---------ANAC58                  --------->TOE2(3)  <-----------RAV1(1)  --------------->AGL15             <---------ANAC58          --------->HSFB2a(2) -------AHL20(2)  <---------DAG2          ---------->DOF2<---------ANAC46          <---------HSFB2a(2)   ttatttgtggttgcctacagctttaccaataatgtgattttttataaagcttacattttgcttatagaaaacctttgaatgagttatagaaaacctttga  26088100               --------->ETT(2)               <---------bZIP60(1)               --------->bZIP60(1)              ---------->ID1                             ---------->DOF2        <---------YAB1                            --------->DAG2                             <-------    <------MYB83<-----------TGA1                 ---------->DOF2                <---------AtMYB61    <------MYB46(1)                            --------->AtMYB61          ---------->ID1    ---------   --------->MYB111(1)                     --------->MYB46(3)           <-----------RAV1(1) <--------   atgagttggtactattgtcgtcattcttctaatttctaaacttcaaacaccaaaagttgcaaagtagtttttttttgttgttttggtttaatattaaaat  26088200                --------->MYB59                --------->MYB46(2)     --------->ANAC58  <---------MYB46(3)     --------->ANAC58  ----------->GT1     --------->ANAC46<-------GAMYB   --------->CCA1(2) <---------At4g35610             --------->ANAC46 --YAB1       <---------MYB52(1)               <----------DOF2          --------->ZAT18  <----------DOF2 >AHL20(2)   <-----------HVH21             --------->ANAC58         --------->DAG2       ------------ -AHL20(2)  <---------MYB46(3)             --------->ANAC58        ---------->DOF2 <----------DOF2*TSS   agatgatacgacatcggttaggcagttgttaaaacgctgtgtttcaagcctttaaacgacagcgtttcttaaagtgctcgatagccttttactttgtaag  26088300                                                          --------->ANAC58                                                      ------>NtERF2                               <--                                             <-----------GT1                                  -------                                            <-------TEIL  --------->ANAC58                    <------                                          <---------GLK1(2)                                   <------                                  --------->ANAC58    --------->LBD16                         -------     <------NtERF2    <----------DOF2 ---------->DOF2<---------DEAR3(1)                      <------- --------->WRI1 <---------CCA1(2) --------->ANAC58  <---------LBD16                         ---------   aagagtcgtcgtaatctcatttctcttttaactgagacgaaaaagattcacttctccggcgagcaatttcaagtttctcggtaatggcgatgtcttctgg  26088400         ------>ZmHOX2a(2)         ============================HOX2a_HOX2a        <---------GLK1(1)        <------ZmHOX2a(2)        --------->GLK1(1)       --------->ARR14(2)       <-----------ARR10       <---------ARR11(3)       <---------AGP1       --------->ARR11(3)            <---------ICU4       <---------ARR14(2)            --------->YAB1      <------ZmHOX2a(1)           --------->YAB1      <---------GLK1(2)       ------>ZmHOX2a(1)    <---------TOE1(2)   <---------ARR14(2)       <---------ARR14(2) -------GLK1(1)         <-----------ARR10  <---------ALFIN1 -->HSFB2a(2)           --------->ARR11(3) --------->DEAR3(1) ---HSFC1(1)            --------->ARR14(2) --------->AtMYB61                                        < ---HSFB2a(2)           <---------ARR11(3)--------->MYB46(3)                                       -- -->HSFC1(1)      --------->TOE2(3) <---------YAB1            <-----------GT1                   <---- --LBD16=============================HOX2a_HOX2a --------->ARR14(2)      <<<<<<<<<TBF1        ------- -->RAV1(2)   ----------->HVH21  <---------YAB1--------->At5g28300    <<<<<<<<<TBF1    <---------GLK1(2)   aactctcaggatctctgcgaccttagtatctccttatcatcatcaccaccgtaatcgcctctcattaccttcttcttcttccaaggtccgattttcttat  26088500                                                                           <------ZmHOX2a(1)                                                                           ==========================                                                                     ------>MYB46(1)                                                                  ----------------->AGL3                                                    ----------->GT1<---------------AGL15                                            ------>ZmHOX2a(2)     ===================================     --------->ZAT6                        <------ZmHOX2a(2)     ------>NtERF2   <-----------GT1                        --------->ARR11(3) --------->ANAC58 ---------ICU4                            --------->ARR14(2) --------->ANAC46 <---------ARR11(3)    - ------->ICU4                <---------At4g35610 <---------ZAT2 --------->DEAR3(1)                  = -----YAB1                   --------->At4g35610 <---------At4g35610 ------>MYB83                 --- -->YAB1             <-----------GT1      <---------ARR14(2) --------->ANAC58 --------->ARR11(3)  <--   aattcttactctacgattcaaattttctcttcgctgcaatttgggatctggagctcgtgaaattcgccaccaaattaggagaacttagattactagcttc  26088600    <---------ANAC58             --------->GLK1(2)--------->ATHB12    <---------ANAC58             --------->ARR14(2) <----------DOF2                 <---------ARR14(2)                                        <---------ANAC58 ======HOX2a_HOX2a              <---------GLK1(2)<---------AHL20(2)                        <---------ANAC58 ===============================================================MADS_MADS                  <---------ANAC46 ----->ZmHOX2a(2)           <------ZmHOX2a(1)  <----------DOF2                        <---------GLK1(2) ==================================HOX2a_HOX2a<-----------------AGL3                  <---------ARR14(2) ------>ARR11(3)          <---------TOE2(3)<---------ANAC58                           --------->ARR14(2) -------ARR11(3)    <---------AtMYB61      <---------ANAC58     <-----------GT1 --------->ZAT6   gatctttcgtttctatgtctgtgtggtttaggaagaatctgaaatgcgtcttttattggaacaatttcacaatttctctctagctctagatttgcttgtt  26088700                     <---------ICU4            ---------->DOF2          ------>ZmHOX2a(1)        ----------->RAV1(2)   --------->GLK1(2)     --------->ZAT2 <---------YAB1                                       <-----------GT1     <---------At4g35610     <---------GLK1(2)                  <------ZmHOX2a(1)     <---------ZAT2<-----------GT1       <-----------GT1      <---------TOE2(3)                    <-   catcgcgagctcctgaaagtttatcattccagtttctgtgtttttacttaggcacttggaaatgaaggattttagtaacaaaacttaagtatatttgttt  26088800  Previous    Next  AGI:  At1g69390.1    Description:  ATMINE1 (ARABIDOPSIS HOMOLOGUE OF BACTERIAL MINE 1); protein binding. similar to plastid division regulator MinE [Brassica napus] (GB:AAZ23773.1) Range:  from: 26088298    to: 26090144    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version