Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100     --------->TOE2(1)                                ------>NtERF2   --------->TOE1(1)                             <---------At4g35610 --TEIL                                          ------>ZmHOX2a(1) ->TEIL                                          --------->At4g35610 ------AtSPL8          <---------YAB1       <---------ANAC58        --------->YAB1                 -- ----->AtSPL8        <----------DOF2        <---------ANAC58       <-------TEIL       --------->ATHB12   atacctagtactgagaaaataggctttgatagggattttgcctagtgcttcctctgcctctgttccaaattcatagttttgatatgcatcattcgaccca  26086900                                                                                        <---------ANAC46                                                                                        <------MYB46(1)                                                                                        <---------ANAC58                                                                                        <---------ANAC58                                                                                       <---------MYB46(3)                                                                                       --------->MYB55(2)                                                                                      <---------MYB55(1)                                                                                     <---------MYB52(1)                                                                                   <---------MYB46(3)                                                   --------->ETT(1)                --------->ATHB12                                                   <---------ANAC46     --------->At4g35610             ----------->GT1                    --------->ALFIN1       --------->GLK1(2)<------MYB83         <---------YAB1                      --------->DAG2       <----------ID1  <---------ATHB12 --------->YAB1                             ---------->DOF2    --------->DAG2    ------>MYB46(1) ------->GLK1(2)                       --------->At4g35610    ---------->DOF2    ------>MYB83   gaatcagagtcattgttgtaaatcgaaatcggagaagggaacgctgaaaagtgtcggaaattgagaaagcgagaagctaaaccaatcgttgggtgtttcg  26087000                                                                                     <-----------GT1                                                                                    <-----------GT1                                                                          --------->ZAT14                                                          >>>>>>>>>TBF1   <---------ZAT14            >>>>>>>>>TBF1                       --------->ATHB12          <---------ZAT18   ------->MYC3                                <---------AHL20(2)   <---------At4g35610   <-------MYC3            <----------DOF2    <---------WOX13(1)    --------->At4g35610        <-----   aaacacatggagaagaagaaaggtttagtctttttgaagaattgagtaattgattacgaagaagaagagcagctactgctctccatttacccattcaatg  26087100                           ----------->RAV1(1)  <---------AHL20(2)                         --------->ZAT14        --------->AHL20(2)                         <---------ZAT14        <---------AHL20(1)                      ------>ZmHOX2a(1)         --------->AHL20(1)                      --------->At4g35610      --------->YAB1                                    <---             --------->AHL20(1)                --------->AHL20(2)                                <---             <---------AHL20(2) --------->ARR14(2)                                              -----   <---------YAB1     <---------At4g35610     <---------YAB1                                    <---- --------->YAB1    ---------->ID1--------->GLK1(2)                               <----------DOF2----- ----ATHB12  --------->AHL20(2) <---------GLK1(2)<---------YAB1            <---------GLK1(2)    <----   aaatcaaaattgaaattttttgtcctctgcaccagaatctctcgacttattatattagtcaatttgtattttggagagattgtcttttgatatcgaaaga  26087200                                  ----------->HVH21                                  --------->WRKY12                                  --------->WRKY38(1)                                <---------At4g35610                                --------->LBD16                                <---------DEAR3(2)                                <---------ATERF1(1)                                --------->At4g35610                               <---------DEAR3(1)                               --------->ATERF1(2)                               --------->DEAR3(1)                              --------->ATERF1(1)                              <------NtERF2                             ------>NtERF2                             --------->ABI4(1)                             <---------ATERF1(1)                            --------->RAP2.3(3)                            --------->RAP2.3(2)                            --------->ATERF1(2)                            <---------ATERF1(2)  <------MYB46(1)           <---------DEAR3(1)  <------MYB83              --------->DEAR3(1) ------CCA1(1)             --------->ATERF1(1)                       *TSS ------RVE1(1)             --------->ERF1                          <---------ANAC58 ---->AHL20(1)             --------->DEAR4(2)                    <-----------GT1                    < -----AHL20(1)             --------->RAP2.3(1)          <---------ATHB12                            - ---->ARR11(3)            <---------ATERF1(1)      <---------ATHB12<---------ANAC58             ----- -----ARR11(3)           --------->ANAC46   <---------ZAT18 ------>ZmHOX2a(2)                   <----   tatttggttacgaagaagccttggttctcgccgccggtgaccacagtcccctaatcaaatgatcgttttacttgtttcaaaacgactgtgttttttgttt  26087300                    --------->MYB52(2)                   <-------TEIL                   <-----------GT1 ---------AHL20(2)<---------MYB52(1)        ----------->GT1                 --------->ANAC58 -------->AHL20(2)<---------ARR14(2)       ----------->GT1                  <----------ID1 --------->TOE1(3) ---->AHL20(2)  <---------MYB46(3)        --------->DAG2                    --------->ANAC58        < -----AHL20(2)<---------At4g35610        ---------->DOF2             --------->YAB1        --------->TOE2(3)   aattaactaaaacgacagcggttcgtttaataaacttgtttcaaaaagtttaaaaccctcttgtagcattttcatattaagccaaaacaaaaacctaaaa  26087400 --------->ARR14(2)                                                       ------->TEIL <---------ARR14(2)                                                    <---------YAB1        <------- ---------CCA1(2)        ---------->DOF2                            ----------->TGA1 ------>ZmHOX2a(1)   ccctatcttggaaaaatgttaagttagaaaagccctaatcttgtagccttggtttttgaagtttagaagaatgacgaatgtctagtccttaccaagtgtt  26087500                                                                                             --------                                                                                             --------                                                                                             <-------                                                                                             <-------                                                                                             --------                                                                                             --------                                                                                            <--------                                                                                            <--------                                                                                          <---------ICU4                                                                                          <--------HAHB4                                          <XXXXXXXXXXXXXXXXXXXXXMIR393A/B                --------->ICU4          --------->KAN4(2)             <------ZmHOX2a(2)                                <---------YAB1         <---------HSFC1(2)            <---------ARR11(3)                              --------->YAB1         <---------HSFB2a(1)        --------->LBD16                                   <------ZmHOX2a(2)         --------->HSFB2a(1) <---------AHL20(2)            ---------->DOF2           --------->ARR11(3)     ----------->GT1        <---------AHL20(2)     <---------AHL20(2)                <---------ARR11(3)    ----------->GT1         --------->AHL20(2)    --------->AHL20(2)             ---------->DOF2 ---- --ZAT6  --------->HSFC1(2) <---------AHL20(1)   <----------DOF2              --------->YAB1---------   atgggattggaaaattctctagggtttcaatttttttccgagatcaatgcgatttatttgtaaaagttggaacaagtttatcaaaaagatcataattatt  26087600 ->ATHB51                                                            <---------AHL20(2) >ATHB1                                                          --------->AHL20(2) --AHL20(2)                                       <---------AHL20(2)--------->AHL20(2) --ICU4                ----------->GT1            --------->AHL20(2)<---------AHL20(2) ->ATHB12            --------->ARR14(2)       <---------AHL20(2)<---------AHL20(2)               ---- >HAHB4              <---------ARR14(2)       --------->AHL20(2)--------->AHL20(2)        <---------- -ATHB51         --------->LBD16      --------->GLK1(1)       --------->YAB1          --------->AHL20(2) -YAB1         <---------LBD16        <---------GLK1(1)--------->TOE1(3)              <---------AHL20(2) ----->YAB1   ------->GAMYB          <---------ARR14(2)<----------DOF2<xxxxxxxxxxxxxxxxxxxxsmallRNA(si3) >ICU4    <---------ATHB12           --------->ARR14(2)--------->TOE2(3)     --------->WOX13(1)  <---   gataaaacaccaataaccccgcatatagtcaattttgcagatttcttataaattaaactttaaaaaataattttataatccatcaaatttaaatactatt  26087700                               xxxxxxxxxxxxxxxxxx>smallRNA(se3)                               <---------------AGL15                               --------------->AGL15                              <-----------------AGL2                              <-----------------AGL3              --------->AHL20(1)              <---------AHL20(1)              <---------ARR11(3)              --------->ARR11(3)            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)            xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)      xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)      xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)        <xxxxxxxxxxxxxxxxsmallRNA(i)      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)      <xxxxxxxxxxxxxxxxsmallRNA(i)      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   <xxxxxxxxxxxxxxxxsmallRNA(i)    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)  xxxxxxxxxxxxxxxx>smallRNA(s) ---------->DOF2            <x <---------HSFB2a(2)          <-----------------AGL1     <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)        -- --------->HSFB2a(2)          ----------------->AGL2     <xxxxxxxxxxxxxxxxsmallRNA(i)             <xx xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)     --------->ANAC58      <xxxxxxxxxxxxxxxxsmallRNA(i)    <xxx xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)               ------->TEIL ----->AHL20(2)              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) -GT1xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) --------->ANAC58   ------->TEIL   --------->ANAC58   ----- ------AHL20(2)          --------->ZAT6<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)   --------->ANAC58 <------   tttttagaaggtccaatatatagtcaaactctactatatagggtaacgcgacttagtggaatcgaacctcgatagaaagacgaaatcaaatgaacttaac  26087800  Previous    Next  AGI:  At1g69380.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G13610.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15325.1); contains InterPro domain Protein of unknown function DUF155 (InterPro:IPR003734) Range:  from: 26085229    to: 26087269    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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