Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      --------->TOE1(2)                                    <---------SPL7                                   <---------ANAC58                                  <---------------AtSPL8                            --------->YAB1                       <---------ARR11(3)                       --------->AHL20(1)                       --------->ARR11(3)                       <---------AHL20(1)       xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)      xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)      xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)     xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)     xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)    xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)          --------->At5g28300    xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)        ----------->GT1    ------------------------>ANAC81<---------ANAC58   xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)         ------------------------>ANAC81   xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)         --------->ZAT6                           <---------GLK1(1)  xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)--------->ZAT18                                  --------->ATHB12  xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  <---------TOE1(1)                           <---------WOX13(1) ------------------>ANAC81 <-------TEIL<---------TOE2(1)                         --------->ATHB12   - -ATHB12            --------->AHL20(2)--------->SPL7---------->DOF2             <---------YAB1-------   caaaaaaaaaaaaaaaaaaaaaaaaaatattcatgaagcgtacgatgaacagtaaaaagagaagagaagagaagagaaggctgtgattgatttcagtcaa  26079500                                               --------->At4g35610                                         <---------YAB1                         --------->ARR14(2)    <---------At4g35610  --------->YAB1                         <---------GLK1(2)<---------ICU4           <---------YAB1                         <---------ARR14(2)    --------->ZAT2    <---------ICU4              <---------YAB1           --------->YAB1           --------->ICU4             <---------AHL20(2)    <---------AHL20(2)         --------->YAB1 ---------->GT1        ----------->ARR10 --------->ICU4 <---------AHL20(2)                    <------ -->YAB1     --------->AHL20(2)   --------->AHL20(2)   --------->AHL20(2)        <-----------GT1   aatgcttaaaaccattaaaattgatcagatactatataaaatcataatcagcttcgattaaatgtcataatgagagttttgatatacctcttctcagttt  26079600                          <---------ARR11(3)                                                  -------                          --------->ARR11(3)                                                -------->HAHB4                      ---------->DOF2                                                       ---------                    <------NtERF2                                                          <---------YAB1                   ------>NtERF2                                                         --------->YAB1                   ----------->RAV1(1)         >>>>>>>>>>GT-3b                   <---------At4g35610                  ----------->HVH21         ----------->GT1    --------->DAG2    <---------ZAT2                 <------NtERF2            ---------->DOF2     ---------->DOF2    --------->ZAT2 ---GLK1(2)    <---------DEAR3(1)--------->ANAC46   ---------->DOF2              --------->At4g35610   ctcagacacaaatcgtctcggcgacaaagatttatgcgaaatgagaaagaaaaataaagaaatgaaaagtgtttttgtttttctgctgagataataatac  26079700                         --------->GLK1(2)                         <---------ARR11(3)                   ----------->GT1             ---------->DOF2                                                          <----------DOF2 --------->YAB1  ----------->GT1                --------->ANAC58                 ---------->DOF2 -->ZAT6 --------->At4g35610      <------ZmHOX2a(1)                           >>>>>>>>>TBF1--------->At4g35610 >YAB1 <------ZmHOX2a(1) --------->ARR11(3)     --------->ANAC58           >>>>>>>>>TBF1   <---------At4g35610   taaaaataaggagcggaaagagagaaaaatctaagaggagagactaaatcacgaactccatgggatgggagagagaagaagaagaaagcttttagcttaa  26079800                  <---------ICU4        <---------MYB52(1)                  --------->YAB1        <----------CDC5                 <---------YAB1        ----------->RAV1(2)               <---------ICU4          <---------At4g35610               --------->YAB1          --------->At4g35610              <---------YAB1         ------>ZmHOX2a(2)            <---------ICU4          <------ZmHOX2a(2)            --------->YAB1         <---------ARR14(2)           <---------YAB1        ----------->ARR10         --------->YAB1       <---------O2         <---------ICU4       --------->O2        <---------YAB1     --------->ETT(2)       <---------ARR11(3)  <---------DEAR3(1)       --------->ARR11(3)  --------->DEAR3(1)                                            <----------DOF2      --------->YAB1<---------YAB1<---------DEAR3(2)                         <---------At4g35610     <---------ATHB12<---------ICU4--------->ARR14(2)                        --------->At4g35610<----   gaatcaaatgatcatcatcatcatcatcgtcgacgtcgatccgctgggccaactatctctctctctctctctctgtatcatctgtcttcttctttatttt  26079900                                                                                              <------                                                                                       <----------DOF2                                                                                    <-----------GT1                                                                     <----------DOF2---------->ID1                  --------->TOE2(3)   --------->YAB1       <----------DOF2      <--------------------                 *TSS           --------->ANAC58          <---------DAG2  <----------DOF2   <--------               <---------GLK1(2)--------->ANAC58       <---------ALFIN1 <------------------------ANAC81 -------GT1  <---------YAB1   ---------->DOF2 ---------->DOF2  <---------AHL20(2)  <-----------GT1 <-   tctctctatctacttctgattcttaaaacggagaaagcaaatataaacaaaagaatcacaccttttttattcttttctttttttttttcctttttttctc  26080000                                                                                            <--------                                                                                 <---------AHL20(2)                                                                               <---------AHL20(2)                                                                             --------->AHL20(2)                                                                            --------->AHL20(1)                                                                            <---------AHL20(1)                                                                           --------->AHL20(2)   -----                                                                     --------->LBD16       --------->AHL20(2)                                           --------->ZAT14          --------->ANAC55(2)    <---------AHL20(2)                                           --------->REM1(2)        <---------ANAC55(2)   <---------AHL20(2)                                           <---------ZAT14        ------>ZmHOX2a(2)       --------->YAB1                                          <---------REM1(1)      <------ZmHOX2a(2)        --------->AHL20(2)                                        <---------ANAC58        --------->ARR14(2)    <---------AHL20(2)                                        <------MYB83 ---------->DOF2----------->GT1   --------->AHL20(2)                                        <---------ANAC58        <---------ARR14(2)    <---------YAB1 -----GT1   <---------ZAT14             <---------ANAC46        <---------ARR11(3)   --------->AHL20(2) ----ANAC81 --------->ZAT14             <------MYB46(1)         --------->ARR11(3)   <---------AHL20(2) ---GT1  <---------ZAT6                --------->MYB46(2)      <---------GLK1(1)--------->AHL20(1)<-- ---------DOF2                         <---------DEAR3(1)      --------->GLK1(1)<---------AHL20(1)<--   tctttctattagagtgaagagagagagagagagagagtagttcggtgtagagagagaaaggagagagatcccgtaaaatatatatattttaattaaaatt  26080100                                                                                      <xxxxxxxxxxxxxx                                                                                     <---------------                                                                                     <xxxxxxxxxxxxxxx                                                                                     <xxxxxxxxxxxxxxx                                                                                    <xxxxxxxxxxxxxxxx                                                                                   <xxxxxxxxxxxxxxxxx                                                                                   <xxxxxxxxxxxxxxxxx                                                                                   <-----------------                                                                                  <xxxxxxxxxxxxxxxxxx                                                                                  <xxxxxxxxxxxxxxxxxx                         --------->HSFC1(2)                                      <xxxxxxxxxxxxxxxxxxx                         <---------HSFC1(2)                                      <xxxxxxxxxxxxxxxxxxx                         --------->HSFB2a(1)                                    <--------------------                      ------>NtERF2                               <---------ARR11(3)<xxxxxxxxxxxxxxxx -YAB1               --------->DEAR3(1)             <---------AHL20(1)       <----------DOF2 ---->YAB1           <---------DEAR3(1)             <---------ARR11(3) <---------MYB52(1) ---------GT1     --------->ANAC46   ------->GAMYB  --------->AHL20(1)<------------------------ANAC81 -------YAB1  <-----------GT1     ----------->RAV1(1)  <---------AHL20(2) <---------YAB1<------------   atactaaatgagaaaattacacgacgacgcttctcacaacagagagagactcgatatatttttgtcaacatctgttattctttttttttttttttttttt  26080200         --------->TOE2(3) <-----------GT1 xxxxxxsmallRNA(le3) ---------ANAC81 xxxxxsmallRNA(le3) xxxxxxsmallRNA(si3) xxxxxsmallRNA(si3) xxxsmallRNA(le3) xxxxsmallRNA(si3) -------ANAC81 xxsmallRNA(le3) xxxsmallRNA(si3) xxsmallRNA(si3)                                                                               <----- xsmallRNA(le3)             <----------DOF2                                                    ------ ----ANAC81       --------->AHL20(2)                                                        --------- xxxxsmallRNA(le3)<---------AHL20(2)             --------->AHL20(2)                       <---------YAB1 ------------ANAC81 ---------->DOF2            <----------DOF2                        <---------ICU4   ttttttctcttcgttaaaaattaaaagtgacttttctcatgagttttagctttaaatgcaacttaatttcaatgtattgttcttctaatcttttcattaa  26080300                                                --------->YAB1          <---------GLK1(2)                        <---------ANAC58       <-------TEIL             --------->ARR11(3)                  <---------AHL20(1)        --------->ATHB12      --------->YAB1                  --------->AHL20(1)       --------->ICU4         --------->ATHB12                  --------->AHL20(2)       <---------YAB1         <---------ICU4                  <---------AHL20(2)   --------->ARR11(3)         <--------HAHB4                 <---------AHL20(2)   <---------CCA1(2)          --------->ICU4   <---------TOE1(2)    <---------ANAC58 --------->YAB1          <---------ATHB12 ----AHL20(2)    --------->AHL20(2)  ------->TEIL <---------YAB1 <---------YAB1           <---------ALFIN1 --->AHL20(2)--------->AHL20(2) <---------At4g35610         --------->YAB1    ---------->ID1 >TOE2(3)    <---------AHL20(2) --------->At4g35610 ----------->GT1--------->TOE2(3)  <-----------GT1   aatcgtatgaaaaatttaaataaattgggtttgcagatgtatatcatgattcatgagtaaaatagtaatcattagattttgttctatttcacacacttgc  26080400  Previous    Next  AGI:  At1g69360.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G26620.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN65039.1); contains InterPro domain Protein of unknown function DUF863, plant (InterPro:IPR008581) Range:  from: 26075947    to: 26079917    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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