Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   ----                                                                                                 <---                                                                                                -----                                                                                             <-------                               --------->MYB52(1)                                            -------- --------->DOF2            <---------TOE2(3)                                               <--------- ----->TOE1(3)            ---------->DOF2                                               <---------At4g35610 ----->TOE2(3)           <---------AHL20(2)                       --------->SPL7        --------->At4g35610 ---ALFIN1               --------->AHL20(2)  --------->YAB1     <---------SPL7          --------->ZAT2   cttcaagctcatcacagcctctgagaattaaagaaacgactctcgaatcagagttgcaagagacaccgtaccaagaacaatggtttgatgagctgtcgga  26046000                                                             <-------TEIL               <-------GAMYB                             --------->ANAC58             <---------At4g35610   --------->AtMYB61   <---------ZAT2            --------->ANAC46             --------->At4g35610   <---------ALFIN1   --------->ZAT2            --------->ANAC58             --------->ZAT2       --------->MYB46(3) ----->GLK1(1)            ------>ZmHOX2a(2)               <---------ZAT2     --------->DEAR3(1) ------GLK1(1)           <------ZmHOX2a(2)                --------->HSFC1(2) --------->AtMYB61 ---->ARR14(2)          <---------ARR14(2)                <---------HSFB2a(1)<---------ALFIN1 --ANAC46               --------->ARR14(2)                <---------HSFC1(2)--------->MYB46(3) ->ETT(1)     <-----------------AGL3                ------->GAMYB<---------ANAC46      ----------->GT1 --HVH21     --------->GLK1(1)                   ----------->RAV1(1)      --------->AtMYB61   aacccagctagacagaactccatttggatccaagaaactactcttcaacttcaacagagcagcttcgtcgtggagaccaccaccactctcggttaaaagt  26046100                                                                                                    -                                                                                                 <---                                           ------>MYB83<-------TEIL                             ----- <---------HSFB2a(2)                     <---------MYB59                                      ------- --------->LBD16                         --------->AtMYB61         <----------DOF2       ---------->DOF2 --------->HSFB2a(2)     --------->AHL20(2)------>MYB46(1)   <-----------GT1       ---------->DOF2---   ttccgagaaaacgaaaacataaacagattaaacagcaagaagaccaaacccagaagtttcatttttcttctttttcttcacaagagaaagagaaagagac  26046200 <---------------------WRI1                  <----------DOF2 <------NtERF2                        <---------AHL20(2) ----->NtERF2                        --------->AHL20(2)          --------->ARR11(3) ------ATERF1(1)                   --------->YAB1          <---------AHL20(2) ------>HVH21                 --------->TOE1(3)           --------->AHL20(2) -->CCA1(2) ---------->DOF2   --------->TOE2(3)           <---------AHL20(2)                     <--- ------>RAP2.6(3)  XXXXXXXXXXXXXXXXXXXXX>MIR864-3P <-----------GT1 ------>ZmHOX2a(2)             ----   gacggcaaaatgaacaaagaaaatcaacaaaaccctaaaataaatctcttttttcacaaatttttttgatctctccctctctctctctcttccttcgctc  26046300                                                                          <---------AHL20(2)                                                                         <---------AHL20(1)            <-----------GT1                                              <---------AHL20(2)      ----    ----------->GT1                                                 ------------>CBF             ---- ------HSFB2a(2)                               ---------->DOF2   *TSS    --------->AHL20(2)      ---- ----->HSFB2a(2)       ---------->DOF2<----------DOF2        --------->AHL20(2)             ---------   tcgaaatcgaaaattttcaagttgcaaaagaagaaagtttctttactcaaaaagaaaatgacattaaacaaacaattttttttctatggctctattatca  26046400                   --------->DAG2                                         <------ZmHOX2a(1)            --------->AHL20(2)                                           ----------->GT1        <---------AHL20(1)                                               <----------ID1      --------        --------->AHL20(2)                                              ------------------------>ANAC81        --------->AHL20(1)                                          ---------->DOF2          --------  <---------ANAC55(2) --------->ARR11(3)      ---------->DOF2  <---------HSFB2a(2)           <-------  --------->ANAC55(2) <---------ARR11(3)     <---------WRKY12  --------->HSFB2a(2)          --------- ----->ANAC46     ---------->DOF2            <---------WRKY38(1)  <------ZmHOX2a(1)  ----------->GT1 ----->ANAC58--------->AHL20(2)    <---------------------WRI1  <---------LBD16     ---------->DOF2 ----->ANAC58<---------AHL20(2)  <------------CBF             <---------ANAC46 ---------->DOF2------- >YAB1  <---------AHL20(2)  <-----------------AGL1        ------->TEIL  ----------->GT1     ---------   agacacataataaatttaaaaaaagttcttaaacgtattggaaacagtcaaagaagaatgaatttcgaggaaaagaggaaaaaaagaaagaaaaaaatct  26046500                                           --------->ATHB51                                           -------->ATHB1   <---------DAG2                          --------->ATHB12                         <---------CCA1(1)   <----------DOF2                        --------->AHL20(2)                       <---------ARR11(3) <---------At4g35610                      <---------AHL20(2)                       --------->ARR11(3) ->ARR11(3)                               <---------ATHB51                  --------->AHL20(2) ->GLK1(2)                             --------->AHL20(2)                <---------ICU4 --ARR11(3)         <----------DOF2  ------>ZmHOX2a(1)                  --------->ICU4  <-----------GT1 >CCA1(1)   <---------DAG2          --------->TOE2(3)                   --------->AHL20(2) -->RVE1(1) <----------DOF2  <-----------GT1                            <---------AHL20(2)          < >RVE1(1)<-----------GT1   <-----------GT1--------->ICU4           <---------ZAT6----------->ARR10  -   ctcagcttttctaacttttcttctttttttttctccgtccttaaattattgaaatttcaaaacatgctagtgaaaaaattacttagatattatccattag  26046600                     <---------DAG2                 <-----------GT1                <---------AHL20(2)              <---------YAB1             --------->AHL20(1)            <---------AHL20(2)            --------->AHL20(2)           <---------AHL20(2)                                                                  ------        --------->AHL20(2)      <---------AHL20(2)                                         --------->At4g35610        <---------AHL20(2)      --------->AHL20(2)              ----------->GT1        <-----------HVH21    <---------AHL20(2)         <---------AHL20(2)<---------ANAC58                     <----------DOF2 ---------AHL20(2)   <----------DOF2             <---------ANAC46             <---------ZAT6<-------- -------->AHL20(2)<-----------GT1                <---------ANAC58        <------ZmHOX2a(1) <---------At4g35610   aattatataaaaaattattttaactttttcttatttatttctaaaattgtcgcttgtatttgtgagagataaataggatagtgtttcactttcagcggtg  26046700                                                                  --------->ZAT14                                                           --------->PCF2                                                          --------->TCP15(1)              <---------ANAC46                            --------->TCP20        --------->ARR14(2)                             --------->ALFIN1     <---------TOE1(2)     ---------->ID1      --------->HSFB2a(2)<---------ZAT14   <---------LBD16--------->AHL20(2)           <---------HSFB2a(2)<---------ZAT18 --->ALFIN1   ----------->GT1<-------GAMYB <----------DOF2<---------PCF2 -DEAR3(1) <-----------RAV1(1)  <-----------HVH21    --------->ALFIN1                    <---------TOE2(3)   tctctctcgggttctgtcgttaaaattttgtcgttgtcagagagactttatagaagagtgggacccagtgaagtcaatgtctgaatgtattaatgtaaga  26046800                                                                --------->ZAT14                                                                --------->ZAT18                                                             <---------At4g35610                                                           --------->TCP20                                                      <---------ANAC58                                                      <---------ANAC46                                                    <-----------HVH21                                                   <------MYB83 <---------ZAT14                                                   <------MYB46(1)                                                  <---------AtMYB61                                                  --------->MYB59                                                --------->ARR14(2)                      --------->ATHB12                        <---------RAP2.6(2)   <------NtERF2<---------PCF2               <---------ICU4                    <-------MYC3        <-----------RAV1(2)--------->TCP15(1)          --------->ICU4                   <---------O2      <---------WRKY18(1)  ----------->HVH21  --------->ATHB12                   --------->O2     ----------->HVH21 <---------ANAC58      <---------YAB1           ---------->DOF2<---------At4g35610--------->LBD16 --------->At4g35610       <---------YAB1     <---------ZAT14------->MYC3    --------->WRKY38(1) --------->ALFIN1   <----------DOF2   gagagagagaagtgaaagaccacatggctgcttctggtttgaccaggcgggataggtcgtgggacctgcactagtctctttattggtccatgattagatt  26046900  Previous    Next  AGI:  At1g69270.1    Description:  RPK1 (RECEPTOR-LIKE PROTEIN KINASE 1); kinase. similar to RPK2/TOAD2 (RECEPTOR-LIKE PROTEIN KINASE2), ATP binding / kinase/ protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT3G02130.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41857.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Leucine-rich repeat, N-terminal (InterPro:IPR013210); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) Range:  from: 26044352    to: 26046365    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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