Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                <------                                                        <---------ARR11(3)    <---------AHL20(1)                                                        --------->AHL20(1)    --------->AHL20(1)                                                        --------->ARR11(3)    --------->AHL20(2)                                                       --------->RVE1(1)      --------->ARR11(3)                                                   <---------AHL20(2)         <---------ARR11(3) -------->ARR11(3)                                 --------->AHL20(2)         <---------AHL20(2) ---------ARR11(3)  <----------ID1            <---------AHL20(2)             --------->AHL20(2) ---------ARR14(2)--------->ANAC58            --------->AHL20(2)  --------->ARR11(3)          <------ ------->RVE1(1)  --------->ANAC58           <---------AHL20(2)   <---------ARR11(3)     <---------AHL20(2) ---->TEIL<---------ARR11(3)        --------->TOE2(3)  --------->CCA1(1) --------->AHL20(2)  <------- ----ATHB12     ---------->DOF2     --------->YAB1 --------->AHL20(1)<---------AHL20(2) <---------YAB1   aatatcttacaagataacaaaagctacaaaacaaataatcttagtattttaaataaaatatcttacaagatttacttaaatatattgatttttatttact  26036100                                                                                                  ---                                                                                                 <---                                                                                                -----                                                                                                <----                                                                                      <---------ARR11(3)                                                                                      --------->AHL20(1)                                                           <-----------GT1            <---------AHL20(1)                                                        --------->TOE2(3)             --------->ARR11(3)                                                       --------->YAB1             <---------AHL20(2)                                                      <---------YAB1             --------->AHL20(2)                                  <----------DOF2   --------->YAB1               <---------AHL20(2)<-  --------->ANAC55(2)          <-----------GT1     <---------YAB1    --------->ARR11(3)         ----- <---------TOE2(3)          --------->ARR11(3)  --------->AHL20(2)   <---------ARR11(3)        ------ --------->MYB59            <---------ARR11(3)  --------->AHL20(1)  <---------AHL20(2)--------->AHL20(2) -----------AG              <---------GLK1(2)   <---------AHL20(2)--------->AHL20(2)  <---------AHL20(2) -----------AGL1          ----------->ARR10     <---------AHL20(1)<---------AHL20(2) --------->AHL20(2) ----GT1           --------->AHL20(2)<---------ARR11(3)<--------HAHB4--------->AHL20(1)    <---------AHL20(2)   atttaggtatctctaactaaattaaacctagattttctttatcttcaaaatttattatcattaactatatatatattcaagaattaaatatattgaatta  26036200       --------->TOE2(3)      --------->YAB1                   --------->AHL20(2)     <---------YAB1            <---------HSFC1(2)     <---------TOE2(3)         <---------HSFB2a(1) --------->YAB1                --------->HSFC1(2) ------>YAB1                   --------->HSFB2a(1) ------YAB1               <---------HSFC1(1) ---->AHL20(1)            --------->HSFB2a(2) -----AHL20(2)            <---------HSFB2a(2)    --------->GLK1(2) --------AHL20(2)         --------->HSFC1(1)     <---------ARR14(2) ---->AHL20(2)         --------->GLK1(2)         --------->ARR14(2)          <-----------HVH21 --->YAB1       --------->ANAC46    <----------DOF2         <---------ARR11(3)   <---------O2<-------   taatattaacataaatacacctaaaattctagaaacttctttttaatatcaaatctggacaagagctatagttcataagtgtcacatggtccgaaacact  26036300                                                                                                    <                                            <---------ARR11(3)                                     <<                                            --------->ARR11(3)                                     <<                                            --------->ARR14(2)                                     --                                          ----------->ARR10                                      <---                                          <---------TOE2(3)                                      <---                                      <----------DOF2                                            <---                                      <-------GAMYB           <-----------GT1                   -----                                     <---------ANAC58         <<<<<<<<<GT-1  ----------->GT1   <-----                   --------->ANAC58  <---------ANAC58    <---------YAB1<-----------GT1  <-------TEIL< ------->TEIL      --------->ANAC58 --------->ZAT18<---------DAG2<---------DAG2     --------->DAG2<-- --ALFIN1      <---------ALFIN1     <---------ZAT18<----------DOF2<----------DOF2  ---------->DOF2<--   ccgaaccctagtaatacccacacgaacaacttgtcgagtgcgttaagatattcctttttctgatttacctttttaaccctggttaaaaagttcataggtc  26036400        ---------->DOF2    <---------------AGL15    --------------->AGL15   ================================================================================================MADS_MADS   <-----------------AGL3                                                          --------->TOE1(3)  --------->At4g35610                                                              --------->TOE2(3) ---------WRKY38(1)                                                                <---------------AGL15 <<<<<<<<WRKY11                                                                    --------------->AGL15 <<<<<<<<WRKY6                                                                    ----------------->AGL2 ------->WRKY18(1)                                                               ------>MYB46(1) ------DEAR3(2)        ---------->DOF2                                      <---------ARR14(2) ---MYB83 --------->DAG2                                                    --------->ARR14(2) ---MYB46(1)       --------->ANAC58                                        ------>MYB46(1) ---->MYB59        --------->ANAC58                                        ------>MYB83   *TSS ----ORA47(1)    ------->GAMYB------------>CBF <---------ANAC58 ----------->GT1  -------->P <-------- ---------WRKY12--------->MYB46(3)             <---------ANAC58--------->DAG2    ------>MYB83      <- ---------HVH21--------->ANAC58       <-----------GT1         ---------->DOF2   ------>ZmHOX2a(1)<--- ------ZAP1    --------->ANAC58    <---------ICU4   ----------->GT1    >>>>>>>>>MYB2     --------->YAB1   ggtcaactaaaaaaggcaaccaagtcaaagaaaacaatttttactagttgagttcggaaataagaaaagtgaaaaccaaatcctaccttaaacagaattt  26036500           <---------AHL20(2)          <---------AHL20(1)        <---------AHL20(2)       --------->AHL20(2)      <---------YAB1     --------->AHL20(1)     --------->AHL20(2)   <---------ARR11(3)                                        <---------ARR14(2)                  <---   --------->ICU4                                            --------->ARR14(2)                 <----   <---------AHL20(1)      <-----------HVH21              --------->ANAC46                      <----   --------->AHL20(1)     --------->ANAC46                --------->ANAC58                   <-------   --------->ARR11(3)     --------->bZIP60(2)             --------->ANAC58         --------->ARR11(3) -GLK1(2) --------->AHL20(1)                        <---------AHL20(2)             <---------ARR11(3) -----ZmHOX2a(1)        <---------ALFIN1        --------->YAB1                   <---------AHL20(2) ------TOE2(3)<-----------GT1                 <---------ARR11(3)                --------->AHL20(2)  <   aggaaaatattatatatttccttcttccacatcaccgatttataccaaaatcatataatcaaggaacctctctaaaaccctattaaatcttctctctttc  26036600                                                                    --------->ZAT14                                                                    --------->SPL7                                                                  <---------SPL7                -----                                                                 --------->DEAR3(1)           <------     <<<<<<<<<TBF1             --------->ARR14(2)               --------------->AtSPL8       <-------  <<<<<<<<<TBF1           ------>ZmHOX2a(1)                     --------------->AtSPL3<----------DOF2 ---------------------ANAC81  <---------CCA1(2)             XXXXXXXXXXXXXXXXXXXXX>MIR831    ========= -----ANAC58       ------>ZmHOX2a(1)                     ------>MYB46(1)       --------->ARR14(2) <-- -----ANAC58    ------>ZmHOX2a(1)                        ------>MYB83        <---------DEAR3(2)------ ---DOF2<<<<<<<<<TBF1<---------ALFIN1 <---------GLK1(1)--------->TOE2(3)    <---------TOE1(2)-------- ------------------------ANAC81<---------ARR14(2)      <---------MYB59     ------>ZmHOX2a(1)<--------   gttcttcttcttcttctcctcctccatcctccaaatctcgatttcccaaaaaaaaaacctaatctcgccgtactctcctcggttccatctttctctgcgg  26036700       <---------AHL20(2)       <---------YAB1 ->NtERF2 ---RAP2.6(2)            <---------ARR14(2) --At4g35610             <---------GLK1(2) =========RAV            --------->ARR14(2)                                                         < ---------RAV1(2)  <---------ARR14(2)                                                              -- >NtERF2  <---------WOX13(1)  ---------->ID1            <---------ANAC46                           -- ->At4g35610       --------->ARR14(2)          ------>ZmHOX2a(2)                      <-------------- ---RAV1(1)    ------>ZmHOX2a(2)             --------->ARR11(3)                   <---------MYB52(1)<   ccaggttttttaattgatccgaattcagatttgttttttttttttgtgatctagggtttcggcgatttgattctgaattgctctgttttgtttttgtttg  26036800           <---------ANAC58                             <---------ARR14(2)           <---------ANAC46                             --------->ARR11(3)           <---------ANAC55(1)                          --------->ARR14(2)           --------->ANAC55(2)                          <---------ARR11(3)           <---------ANAC55(2)                         <------ZmHOX2a(1)           <---------ANAC58                          <---------TOE2(2)      --------->YAB1 --------->CCA1(2)               <---------TOE1(2)      <---------ICU4--------->ARR14(2)              <-----------RAV1(2)     --------->ICU4 --------->ARR11(1)           <---------At4g35610 ------MYB46(1)     <---------ARR14(2)           --------->At4g35610           --------------->AtSPL8 ------->MYB59  <---------ZAT14                ---------->CDC5  --------->At4g35610 ------->MYB46(2)   --------->ARR11(3)       <-----------HVH21  <---------At4g35610     --------->YAB1 ----------ANAC81 ----------->ARR10    <---------MYB46(3)     <---------RAP2.6(2)<---------ZAT14  <-- ------MYB83    <---------At4g35610  <-------GAMYB --------->ZAT14             --------------->AtSPL3   tttggtaatcagtacgtgtgcagatatggctaccgagggagttgttccttcagcgcaggatattgctgctgaatttgtgagacagtactatcatgtttta  26036900                                                     <---------ARR14(2)                                                     --------->ARR14(2)                                                 <---------At4g35610                                                 --------->At4g35610              ------->TEIL                       --------->ZAT2        ------>ZmHOX2a(1)                        <---------ZAT2                               <------  --------->At4g35610 <------MYB46(1)        <-----------HVH21                                <------  <---------At4g35610 ----------->GT1       <---------bZIP60(1)                            <---------MYB52(1)  <---------ZAT2      <------MYB83          --------->bZIP60(1)           --------->YAB1  <-------GAMYB  --------->ZAT2     <---------TOE2(2)    --------->ZAT14                <---------YAB1  <---------ANAC46 ----ZmHOX2a(1)      <---------TOE1(2)   <---------ZAT6         <---------ANAC46<----------DOF2------   ggacagcttcctcatgaagctcgtaggttatatgttgatgctagtgttgtcagcagacctgatgttactggtactatgatgtcttttacttccgttgagg  26037000  Previous    Next  AGI:  At1g69250.1    Description:  nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein. similar to nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] (TAIR:AT2G03640.1); similar to putative ras-GTPase-activating protein SH3-domain binding protein [Trifolium pratense] (GB:BAE71222.1); similar to putative ras-GTPase-activating protein SH3-domain binding protein [Trifolium pratense] (GB:BAE71310.1); contains InterPro domain RNA recognition motif, RNP-1; (InterPro:IPR000504); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contain Range:  from: 26036490    to: 26039167    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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