Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                <----------DOF2                              --------->ANAC58         --------->YAB1         <---------HSFB2a(2)        --------->ANAC46      <-----------GT1           --------->HSFB2a(2)    <-----------GT1 ------->ANAC58            <---------HSFC1(2) <-------TEIL --------->ANAC58 ------->ANAC58            --------->HSFC1(2)--------->DOF5.7(2) ------>WOX13(1)        ---------->DOF2     --------->TOE1(3)          --------->AtMYB61   cactcaattaaccatactttgtttgtgaaagcttctgtaagaaaaacgttcacatttttacaaggaaacaaaaccaaaacatgaattcagacttgagagt  26031000                                              <---------ANAC58                                              <---------ANAC58                                         ---------->DOF2                                   <---------ICU4                                   <--------ATHB1                                   <------------ATHB5                                   --------->ATHB12               --------->YAB1      --------->ATHB51               <---------ICU4      -------->ATHB1                                                 >>>              <---------YAB1       --------->YAB1                     <---------ATHB12           ----          --------->ANAC55(2)     <---------YAB1                  --------->MYB46(3)             ----          <---------ANAC58        --------->ICU4                <-----------GT1   <--------ATHB1 ----          <---------ANAC58        <---------ATHB12          <----------DOF2    --------->YAB1  <-----   cattaacaacttacttatcatcaccaaaatactacaatcattgaaaagacttgccaattgaactttgaaccactcatcgaagaataattcatctaaacct  26031100     --------->AHL20(1)     --------->AHL20(2)     <---------AHL20(2)     <---------AHL20(1)    <---------AHL20(2)                                                     --------->AHL20(2)    --------->AHL20(2)                                                     <---------AHL20(2) >>>>>>MYB98                                                          --------->AHL20(2) ----->MYB52(1)                                                       --------->YAB1            <---- -->MYB83                                                            <---------ATHB12           ----- -->MYB46(1)                                                       --------->WOX13(1)           ----- ----MYB59                                              <----------DOF2   --------->AHL20(2)    -----   aacaaaataaatttctcaatattcaataacctagacctagagtatatatacaaacattctttcatatatcaatcaaattaattctacctattcaaaccta  26031200                            --------->ANAC58                                                     ----                     --------->ANAC46                                                            ----       --------->ANAC58     --------->ANAC58                                                    -----       --------->ANAC58 ----------->RAV1(1)                                            --------->ANAC55(2) <---------MYB52(1)  --------->ANAC58                                                  <---------ANAC55(2) -----ARR14(2)       --------->ANAC58                                                  --------->ANAC58 ->MYB46(1)         ------->TEIL                                                       --------->ANAC55(1) ->MYB83         <---------MYB52(2)  <-------TEIL                                      --------->ANAC46 ---->ARR14(2)--------->TOE1(2) ----------->RAV1(1)      <---------ATHB12              --------->ANAC58   tccgttgatatgcaatgctacgaacgcaacatgccaacatacatagaaaaacttctcaaatcaaacacctaagttgagaagaaaacaacacgaaacacca  26031300                             <---------WOX13(1)                       --------->DAG2                       <---------TOE2(3)                   <---------ZAT2       ----------->RAV1(2) --------->ATHB12                        --------->ANAC58       --------->ANAC55(2) <---------MYB46(3)                      --------->ANAC58       <----------     <-----------GT1   <---------TOE1(3)                         ---------->DOF2       <---------YAB1 -->MYB83         --------->ANAC58                         <---------ATHB12          ----------->GT1 -->MYB46(1)      --------->ANAC58                   --------->ANAC58              <------------CBF ---->WOX13(1) --------->At4g35610    ---------->DOF2--------->ANAC58  *TSS   ----------->GT1     ---   atctagtttacctgatcagcaagctaaggtgattggagaagaaagggaagaagacgagccaatgagagaaagcaagaagcctgtgaattgtgatatatag  26031400                                  ------------>CBF                                 <-----------HVH21                                --------->ANAC58       --------->ATHB12                                --------->ANAC58       --------->YAB1                                --------->bZIP60(2)    <---------ICU4                               <                                <---------TGA1a        <--------HAHB4                               <             --------->DAG2     ====================MYC_MYB                                         <         --------->YAB1         --------->O2          <---------YAB1                           <-----      --------->YAB1            --------->ANAC46      --------->ICU4                          -------   --------->YAB1            <------NtERF2          --------->YAB1                       --------->DOF5.7(2)  <---------------AGL15     <-----------HVH21       <---------ICU4                      --------->TOE2(3)  --------------->AGL15  <---------At4g35610       --------->ICU4                       --------->TOE1(3)  =================================================================================================== <---------WOX13(1)      <---------ZAT2          --------->YAB1                         <----------DOF2 <---------ANAC46        --------->ZAT2  ----------->RAV1(1)                      ----------->GT1  -- -TBP<---------YAB1      --------->At4g35610------->GAMYB   <-----------GT1<---------ANAC46<--------- -------->HVH21 --------->ALFIN1--------->TGA1a------------>CBF           <---------MYB52(1)  <------   gtgactgataatagtaaggtgatgctaagctggcacgtcaattcaacagaacaataatcatttcactctataaaccggtgtgttttgtaactttaacctt  26031500 <---------------AGL15 --------------->AGL15 <----------DOF2 -----------------AG -----------------AGL3 -----------------AGL2                                                             --------->WOX13(1) -----DOF2               <----------DOF2                                          <---------AHL20(2) -->TOE2(3)             <---------DAG2                                            --------->AHL20(2) ================MADS_MADS        <---------ZAT6                     <----------DOF2  --------->YAB1 -------->ID1           --------->TOE2(3)                    <-----------GT1  --------->AHL20(2) --GT1               <-----------GT1                     <----------DOF2      --------->ICU4 ---DAG2            <-----------GT1                      <---------DAG2    <---------AtLEC2       ---   tttctttttttggttattgattttaacctttttctagtgtaatccaaaaattagtttcgcttttttctaatctttttgcattaattaatcaaaactttca  26031600                      <-----------HVH21             ----------->GT1                                                          ---------->DOF2             <------MYB83                                                            <---------AHL20(2)            --------->MYB59                                                         <---------AHL20(2)            --------->MYB46(2)             --------->PCF2               <-----------ARR10          <---------MYB52(1)          --------->DAG2                    <---------ARR11(3)    -------     <-----------GT1 ----------->GT1 ---------->DOF2                    --------->ARR11(3)    -------    <---------YAB1------------>MYB.PH3(1)  <---------TCP15(1)          <---------CCA1(2) <----------ID1 ------->DOF2<------MYB46(1)--------->ANAC46        --------->LBD16 <-------TEIL    --------->AHL20(2)   caaagtattactgtttggtaaaactgttacacacgatgaaaaagggacccattccgaaatatgtttttggttcatatctctccaaattaaaagggcaaac  26031700                                                <-------TEIL                                       <---------TOE1(2)                                     --------                                      ------>ZmHOX2a(1)                                      <------MYB83                                    ------>ZmHOX2a(2)                                        <------MYB46(1)                                   <------ZmHOX2a(2)                                  <---------ANAC58                                  --------->ARR14(2)           ----------->GT1        <---------ANAC58                   <---------DAG2 <---------ARR11(3)       <---------ARR14(2)         <---------ANAC46         --------->YAB1           --------->ARR11(3)       --------->ARR14(2)      <---------GLK1(1)         <---------ICU4          <------ZmHOX2a(1)      --------->ANAC55(2)        --------->GLK1(1) -->ANAC58         <----------DOF2<---------ARR14(2)   <-----------------AGL1     --------->ARR11(3) -->ANAC58  --------->ZAT6  <-----------GT1<---------LBD16 --------->MYB52(1)     <---------ARR11(3)   aaatcggacaattatctctaactttatgttttacaggatcctatgtccggttcagtttacataaccggtaacattgatcaagaagatttcttgggaggta  26031800                   <---------LBD16                 --------->ARR14(2)                                                     --------->HSFB2a(2)                 <---------ARR14(2)                       <-----------HVH21             <---------HSFB2a(2)       --------->TOE2(3)                              <---------AtLEC2    ----------->GT1    <---------GLK1(1)                            --------->DAG2         --------->At4g35610    --------->GLK1(1)--------->LBD16           ---------->DOF2          <---------At4g35610       --- --->GT1         --------->GLK1(2)  <------ZmHOX2a(1)<-------TEIL  <----------DOF2     <---------LBD16   attgagaaatctcaacgagtatccggttcaaagactgaggacgagagaagaaaggtgcatggtcagagcctttgagatgaaaaacttgttctggagggtt  26031900  Previous    Next  AGI:  At1g69230.1    Description:  SP1L2. similar to SP1L1 (SPIRAL1-LIKE1) [Arabidopsis thaliana] (TAIR:AT1G26355.1); similar to unknown [Populus trichocarpa] (GB:ABK94106.1) Range:  from: 26030016    to: 26031371    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g69240.1    Description:  hydrolase, alpha/beta fold family protein. similar to hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] (TAIR:AT1G26360.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49163.1); contains InterPro domain Alpha/beta hydrolase fold-1 (InterPro:IPR000073) Range:  from: 26031639    to: 26033897    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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