Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                   --------->ANAC58                                                      --------->ANAC58           --------->ANAC58                                                      --------->ANAC58         <---------WRKY12                                                  <------ZmHOX2a(1)           --------->WRKY18(1)                <---------ARR11(3)         --------->GLK1(2)           --------->YAB1                --------->ARR11(3)        --------->ARR14(2)      --------->AHL20(2)                -            --------->YAB1           --------->MYB52(1)   ---------->DOF2    <-----------HVH21   ----           <---------ATHB12<---------DAG2 <---------ARR14(2)      <---------AHL20(2)             ---- --->ICU4--------->WOX13(1)<----------DOF2<---------GLK1(2)--------->DAG2  --------->DAG2        ----   ttttatgagaccaattagtatcttatgacctttatgaaataccagattctaaggacaagaaaaagcattaaaatcataaggtcaaggaagcgagagagca  26023300                             <------ZmHOX2a(1)       <----------ID1            <---------ARR11(3)                     ---------->DOF2            <---------ARR14(2)           --------->MYB46(3)     --------->DAG2                   ----            --------->ARR14(2)         <-----------GT1    --------->ANAC58                      ----- ---------->RAV1(1)         --------->At4g35610 --------->TOE2(3)                            -------- ----->ANAC58               <---------At4g35610 --------->TOE1(3)                    --------->At5g28300 ----->ANAC46 <-------TEIL<-----------RAV1(2)<---------ALFIN1 ---------->DOF2       ----------->GT1 ----->ANAC58--------->CCA1(2)       --------->AHL20(2)   --------->ANAC58    ---------->DOF2<-------   agcaacattgagaagatacattttttaggcaggagacattttaacaaacaccttaaagacaagaaaaaggcaaacacacagaaagaccgtaaacaaatcc  26023400                                                                                               <-----                                                                                               <-----                                                                                              <------                                                                                             <-------                                                                                             <-------                                                                                         <---------ATERF1(2)                                                                                         --------->ATERF1(2)                                                <-----------GT1                        --------->MYB52(1)     --------->LBD16                           <---------AHL20(2)                  <---------ICU4 -->ZmHOX2a(1)                     ----------->GT1         --------->YAB1         --------->ICU4 ---->TOE2(3)           ---------->DOF2    <---------AHL20(2)                  <------NtERF2<-------- ->ARR14(2)            <---------WRKY38(1) --------->AHL20(2)                 ------>NtERF2<---------MYB52(1) --ARR14(2)            <---------WRKY12   <---------AHL20(2) ---------->DOF2---------->ID1--------->LBD16   taaaacccagaaaacagagaggcagtcaaagaaaacaaggtttatttattttatcttacattcaaaagtgtcttcttcgtcgccattactaccggcggtt  26023500                                                                                               ------         --------->At4g35610                                                                   <-----         <---------ZAT2                                                                        <-----         --------->ZAT2                                                                   <---------ANAC58      <---------ETT(2)                                                                    ===========     --------->ALFIN1                                                                     <---------bZIP60(2)     --------->WRKY18(1)                                                                  ===========    <-------GAMYB                                                                         <---------ANAC55(1)   <---------MYB46(3)                                                                     <---------ANAC55(2)  <---------ANAC58                                                                        <---------TGA1a  <---------DREB2C(2)                                                                     <---------ANAC58  <---------ANAC58                                                                        --------->O2  <---------RAP2.6(2)                                             ----------->GT1         <---------O2 ----ARR14(2)                                                    ----------->GT1          --------->TGA1a -----DOF2            =====================================HOX2a_HOX2a                    --------->ANAC55(2) -GAMYB  <---------At4g35610                                   ---------->DOF2 <------ZmHOX2a(1) --MYB46(3)           <------ZmHOX2a(1)                        =====================================bZIP_DOF --DEAR3(2)     <------ZmHOX2a(1)    >>>>>>>>>TBF1  <------ZmHOX2a(2)      <---------ANAC46 --------- -DEAR3(1) ----------->HVH21 <----------ID1         ==================================HOX2a_HOX2a<---   tttggcggtcgagctgaaggagaaggagaagaagacgaagaagaaaacgtagagatcgaagaagagaaaggaaaatagcgaggaagagtaagacgtgtcg  26023600                                                          <------MYB83                                                          <------MYB46(1)                                                          ----------->GT1                                                         --------->MYB59                                                     <---------DEAR3(2)                                                    <---------TOE2(2)                                                   <------NtERF2                                                   --------->ATERF1(1)  <----------DOF2                                  <---------LBD16                       --------->ZAT2 --->bZIP60(1)                                   <---------DEAR3(1)                ---------->DOF2  < ----bZIP60(1)                                --------->ANAC46               --------->ANAC58       < ----ANAC46                --------->DAG2  <-------TEIL<---------MYB52(1)    --------->ANAC58       - ============bZIP_DOF     ---------->DOF2 --------->CCA1(2)         <---------ANAC46     <---------At4g35610 ============bZIP_DOF>>>>>>>>>TBF1      --------->GLK1(1)--------->MYB46(2) <---------LBD16        <- >ALFIN1         <------ZmHOX2a(1)   ------->GAMYB<---------RAP2.3(1)     --------->ZAT2 --------->At4g35610 ---NtERF2     <---------TOE2(3)  --------->MYB52(1)<---------TOE1(2)    --------->GLK1(2)    -------   tcgtctttggaagtagtaaggaagaagaaaaagttctaacggagatacaagtcgccggtttggtaaaacggcgagaagctcggaacaaagcagctacaaa  26023700            --------->ANAC58            --------->ANAC46 --------->GLK1(2)                          --------->ANAC58 <---------AHL20(2)         <---------AHL20(2) ---------ARR11(3)           --------->GLK1(1)              --------->ICU4--------->MYB52(1)    <---- ---------GLK1(2)            --------->HSFB2a(1)   <---------YAB1 <---------YAB1      <-----------TBP -------->ARR11(3)  <---------DAG2----------->RAV1(1)  --------->YAB1   --------->TOE2(2)       ----- --------RVE1(1)    <----------DOF2         --------->ANAC58--------->AHL20(2)  <---------ARR14(2) --->DOF2   --------->ANAC58 <---------GLK1(1) <---------ANAC46<---------YAB1   --------->ARR14(2)   gagattttggtatctcgccatgctttttcgaatttcccacagagacacgacttgtaatagtatttattattaaacctaaggggatactatttatacgagt  26023800                    <---------ATHB12                    ------------>CBF                                 --------->YAB1              ---------->ID1                                  <------MYB46(1)       <------ZmHOX2a(1)            <---------MYB46(3)                              <---------WOX13(1)   --------->HSFB2a(2)     <---------ARR14(2)                                    <------------CBF      --------->HSFC1(1)     --------->GLK1(2)            <------------CBF        --------->ATHB12       <---------HSFC1(1)     --------->ARR14(2)      --------->HSFB2a(2)       <------------CBF --------->YAB1            --- -----ZAT6<---------MYB52(1) <---------HSFB2a(2)<----------ID1<------MYB83       <---------HSFB2a(2) ------>GT1 --------->MYB52(2) ------------>CBF<------ZmHOX2a(1)    <---------AHL20(2)   --------->AHL20(2)   gttacaaaatccgtttgttccattcaatcttctagcaattgtgctaagaggagacaaaattgattggtttttaataaaaacttctaggaaaataaacatg  26023900                                                                      <---------ZAT14                                                                  <------NtERF2                  <---                                                                 ----------->GT1              -------                                        --------->CCA1(2)        --------->LBD16             <-------                                       --------->ARR14(2)       <---------ANAC46             --------                                       <---------ARR14(2)       <---------DEAR3(1)           <------- ---->TEIL       --------->YAB1   ----------->RAV1(1)          <---------LBD16             ----------   tacttgctgagacgacctatactaatacaagagtagcaacagatatgaacacaagactatttagaggcggagaatagtgcgaagagtatcgcacagattc  26024000                                                 --------->TOE2(1)                      <---------ANAC58           --------->TOE1(1)                      <---------ANAC58      <---------ARR14(2)                      <---------ANAC46      --------->ARR14(2)       --------->At4g35610                 <---------GLK1(1)       <---------At4g35610                 --------->GLK1(1)      --------->MYB52(2)             <---------At4g35610 --------->TOE1(2) ------YAB1          --------->MYB52(2) <------NtERF2   --------->At4g35610 -->GLK1(2)          <---------MYB46(3)--------->RAP2.6(2) --ARR14(2)       <-------GAMYB      --------->At4g35610----------->RAV1(2)       <---------TOE1(3) ->ARR14(2)    ------>ZmHOX2a(1)  <---------ZAT14--------->ANAC46                 <---------TOE2(3) --GLK1(2)   ----------->RAV1(2) ------>ZmHOX2a(1)    <---------ALFIN1    <---------ANAC58         -- ->ARR10  <---------At4g35610<---------ARR14(2) ------>ZmHOX2a(1)         <---------ANAC58<----------   tgaatggtttgctgctcctgcgttgcttgcaattcctgcagcggcatttcctcgtaacacctgagatttatgcaatgggtgtttaaggtttttagccaga  26024100                                                <-----------RAV1(1)                                           --------->ANAC58                                           --------->ANAC58                                          <-------TEIL                                          ------->TEIL                                          --------->SPL7----------->GT1                                        <---------SPL7 <------MYB46(1)                                        --------->TOE2(2)                                <---------ANAC58              --------->ZAT14         --------------->AtSPL3                             <---------ANAC58              <---------ZAT14    --------->TOE2(3)     <------MYB83           <---------At4g35610 ------->DOF5.7(2)             <---------AHL20(2)    <--------P            <-------TEIL<---------ARR11(3) -GT1  --------->YAB1   <-----------GT1 --------->TOE1(2)            <---------AtLEC2  --------->ARR11(3)   cgttaacaaaaatcactaaactgggtttactattttcttaaacgtacgctctgtggtaggctaaaacttgtgcaaggttcatcagagaagagcttgttgt  26024200  Previous    Next  AGI:  At1g69210.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G77122.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41849.1); contains InterPro domain Protein of unknown function DUF150 (InterPro:IPR003728) Range:  from: 26022101    to: 26023721    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g69220.1    Description:  SIK1 (ERINE/THREONINE KINASE 1); kinase. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G53165.2); similar to kinase [Arabidopsis thaliana] (TAIR:AT1G53165.1); similar to putative serine/ threonine kinase [Sorghum bicolor] (GB:AAM47579.1); similar to 36I5.3 [Oryza sativa (japonica cultivar-group)] (GB:AAG45491.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41850.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009) Range:  from: 26023752    to: 26029834    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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