Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         ---------->DOF2                                    --------->YAB1                                    --------->TOE2(3)                                ------>ZmHOX2a(1)                                    --------->TOE1(3)              ---------->DOF2------>ZmHOX2a(1)<- ------->AHL20(2)<---------MYB52(1)<---------YAB1        <----------DOF2   <---------YAB1       -----   attatacatactcttcttcgctagtttcaactacattaccataaaacaaaattcagtttctttctcagtgaaagtatatgattcctcctctcatcaaata  25974700                                                                                                -----     ----------->HVH21                                                                          <----     ----------->TGA1                              <---------ZAT2                  --------->ANAC46   ----------->RAV1(2)        <-----------GT1     ------>MYB46(1)                  --------->ANAC58  -------->P                --------->YAB1        ------>MYB83                     --------->ANAC58 --------MYB52(2)           <---------ICU4   <-----------GT1           --------->ARR14(2)     ------- ---->AHL20(2)        <------ZmHOX2a(2)   --------->ARR14(2)           <---------ARR14(2)  --------->DEAR3(1)   aactaacctgacgctgtctctgcgatctaattatacccttatcgaattcaccaagctcatcgttctgttctccaatacgcttatcaaggaacaccgaaga  25974800                                                                          ------->TEIL        <---------At4g35610                                         ----------->TGA1        --------->At4g35610                                <---------HSFB2a(2)                <------  <-----------GT1          <---------ANAC58                --------->HSFB2a(2)                <------ ---->ARR11(3)             <---------ANAC46                --------->HSFC1(1)          <----------DOF2 -----ARR11(3)             <---------ANAC58     ------->GAMYB       ----------->HVH21  <---------DAG2 ---->ARR10       <----------DOF2     ------>ZmHOX2a(1)    <---------HSFC1(1)         <---------DAG2   ttttaaactctgctcatactctttctccagcgtgttcttcctcttatcaacagcacgagttcgagaaacactgacgaatcgttcttcacctttacgcttt  25974900                   --------->LBD16                --------->MYB52(1)       <---------GLK1(1)       --------->GLK1(1)      --------->ARR11(3)       <---------WOX13(1)      <---------ARR11(3)   ------>ZmHOX2a(2)      --------->ARR14(2)  <------ZmHOX2a(2)      <---------ARR14(2) <---------ARR14(2)                                           <---------HSFB2a(2)     <------ZmHOX2a(1)   --------->ARR14(2)                                           --------->HSFB2a(2)     =============================HOX2a_HOX2a                                       ----------->RAV1(2)     ============================HOX2a_HOX2a                                        --------->At4g35610  <---------LBD16  ------>NtERF2                                              --------->At4g35610  --------->LBD16<---------LBD16                                       <---------AtLEC2  --------->PCF2 ---DAG2      --------->HSFB2a(1)                --------->ETT(2)   <----------DOF2 <---------At4g35610 ----DOF2     <---------HSFB2a(1)           <---------GLK1(2)   <-----------GT1    ------->TEIL     <   tttccgaggatatcgaacttccggcgagatcggattgattcaaatggattatcgaccttctgcgttttagctttcatggccactgcatctggacccattc  25975000                                                                          --------->MYB52(1)                                                                         ----------->TGA1                                                                         ----------->HVH21                                                                     <------NtERF2                                                                    ------>NtERF2                                                                    --------->LBD16                                                                   --------->ALFIN1                                                                   <---------ANAC46                                                                   <---------DEAR3(1)                                                                  <------NtERF2 --------->ABI4(2)                                                                  <---------LBD16                                                                  <---------ABI4(1)                                                                  --------->ATERF1(1)                                                                 <---------DEAR4(2)                                                                 <---------ORA47(2)                                                                 <---------RRTF1(1)                                                                 <---------ERF1 --------->MYB55(2)                                                                 <---------RAP2.3(1)                                                                 <---------RAP2.6(1)                                                                 <---------ATERF1(1)                                                                 ------>NtERF2  <---------MYB46(3)                                                                <---------RRTF1(2)                                                                <---------RRTF1(3)                                                                <---------RAP2.3(2)                                                                --------->DEAR3(1)                                                                <---------DEAR3(1)                                                                <---------ATERF1(2)                                                                --------->ATERF1(2)                                                                <---------RAP2.3(3)  <---------ANAC58                                                               --------->ATERF1(1)   <---------ANAC58                                                               <---------ABI4(1)--------->MYB52(2)                                                              <---------RAP2.3(1) <--------P              <<<<<<<<<MYB98                                  <---------ATERF1(1)<-------GAMYB              <---------MYB52(1)                              ------>NtERF2 <---------DEAR3(1)       <----------DOF2                                        --------->LBD16  --------->ALFIN1      <---------DAG2                                         <---------DEAR3(1)<---------AtMYB61 ----------DOF2         <<<<<<<<<TBF1 <---------YAB1        <---------LBD16 <---------DREB2C(2)<-----   ttctttcgccttttttgttaggcttcttcttcattttgttatctttccccatggttttttgctccggcggcggggatgacggtggttgctagggtttatg  25975100                                                                                                    <                                                                                                    -                                                                                                    <                                                                                                   <-                                                                                                   <-                                                                                                   <-                                                                                             --------        ----------->GT1                                                                      --------      --------->MYB52(1)                                                                    --------- <---------At5g28300                                                                        <-------- ----YAB1      <---------TOE2(3)                            <------------CBF        <----------ID1 <-   aattacagtaacgaaaaaaggttttgggagagttttgtttgttttaggcttagcctatatcgaattgctcagactcagactacaagaagacgaagaaacg  25975200         <-------TEIL       <---------ARR14(2)       --------->ARR14(2)    --------->ETT(1)    <---------ANAC46  <---------ARR14(2)  <-----------HVH21  --------->ARR14(2) <------NtERF2 ---------MYB46(3) -------->MYB55(2) ---------DEAR3(2) --------ANAC46 --------DEAR3(1)                                   --------->ALFIN1 --------ANAC58                                   <------------CBF ->CCA1(2)                                     ------------>CBF<----------DOF2          --------->ARR11(3) ->MYB52(1)                                   ----------------->AGL1            --------->ANAC58 <--- >ARR14(2)                         <---------AHL20(2)        <-----------------AGL1 ---------->DOF2 -ARR14(2)           ---------->DOF2    <---------AHL20(2) <----------DOF2      --------->ANAC58 ---- --------ANAC58 <---------WRKY18(1)--------->AHL20(2)   ------>NtERF2    <------------CBF <----------   ggcgggtcggatacagtttgacccaaagcccatatgtttaattttaaggcccaattggggcctttctttttgggaaattggcaaacaaaagaaattgttt  25975300                         <---------YAB1                     --------->AHL20(2)                                                          ----                    <---------AHL20(2)                                <---------AHL20(2)       ------              ----------->GT1---------->DOF2          --------->ARR14(2)            --------->YAB1              <---------ANAC58           --------->ANAC46            <---------AHL20(1)        <----- ------ANAC46 <---------ANAC55(2)    -------->ATHB1   <---------ARR14(2)           <------ZmHOX2a(2) ------->GT1  <---------ANAC58      --------->ICU4<---------LBD16    --------->AHL20(2)        ------ --CBF        <---------ANAC46--------->DAG2     <---------LBD16     <---------AHL20(2)        <-----   agtgaaatctcatatttcgtaaataatatgaaaaaggaattattcgccagactcgggatttgatcatacaattttttttttttcgatcatacaaattacg  25975400                                    <---------ANAC58                                    <---------ANAC58   <---------YAB1                   <---------ANAC46    <---------LBD16 ------>DOF2                       <---------LBD16<---------ANAC58 --->ANAC58               --------->GLK1(2)       <---------ANAC46 ----YAB1              --------->AHL20(2)         <---------RAP2.6(2)                        xxxxxxxx --->ANAC58        <---------AHL20(2)             <---------ANAC58                         --------->LBD16 ----ANAC55(2)     --------->AHL20(2)--------->LBD16 <----------DOF2                     <---------LBD16   aaagtataattttggatgtattaaaaaaaatcgggtttgcgggttttccattgcggttttcggattagcaaattccaaaaaactaaatttatgcggataa  25975500                                              <-----------HVH21                                             --------->ANAC46                                             <---------ANAC55(2)                                             --------->ANAC55(2)                                            ------>ZmHOX2a(2)                                           <------ZmHOX2a(2)                                          --------->ARR14(2)                    --------->MYB52(1)    <---------ARR14(2)      <---------AHL20(2)                  --------->At5g28300  --------->ANAC58           --------->AHL20(2)                --------->ZAT6         <---------ANAC55(2)     --------->AHL20(2)          <---------ANAC46             --------->ANAC55(1)     <---------AHL20(1)        --------->LBD16                --------->ANAC46        --------->AHL20(1)       <---------RAP2.6(2)             --------->ANAC55(2)   --------->AHL20(1)       <xxxxxxxxxxxxxxxxsmallRNA(s)    --------->ANAC58      <---------ARR11(3)              <-------      <---------LBD16                 <---------LBD16        <---------AHL20(1)              --------    <---------ARR14(2)               --------->MYB52(1)--------->ANAC58                      <-------    --------->GLK1(2)     xxxxxxxxxxxxxxxx>smallRNA(s) --------->ANAC46                      -------- xxxxxxxxxxxxx>smallRNA(se3)        <---------SPL7     --------->ANAC58         ---------->DOF2   caaaacaatccggcttgaacagtaactgaagtttttgacatacggatccgtcacaactcgcaaaatattttaatccattgcaaaaagaacatactagctc  25975600  Previous    Next  AGI:  At1g69070.1    Description:  binding. similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAN08225.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO41828.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN71711.1); contains InterPro domain Ribosomal protein S30Ae/sigma 54 modulation protein; (InterPro:IPR003489); contains InterPro domain Nop14-like protein (InterPro:IPR007276) Range:  from: 25970975    to: 25975052    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version