Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                               ----------->RAV1(1)                                                             <---------ALFIN1                                                           <-----------HVH21                                                           ------>NtERF2            --------->CCA1(2)                              <------NtERF2           --------->ARR11(3)                          --------->ANAC46           --------->ARR11(1)                   ------------------>SPL14           --------->ARR14(2)                   --------->DEAR3(1)           <---------ARR14(2)                  --------->ANAC46  <-----------RAV1(1)       --------->ANAC58     --------->HSFC1(1)                        --------->ANAC58 ------->MYC3            ------>ZmHOX2a(1)     --------->HSFB2a(2)               <---------AHL20(2) <---------ATERF1(1)   --------->ANAC58     <---------HSFC1(1)                --------->AHL20(2) --------->RAP2.6(2)   --------->ANAC58     <---------HSFB2a(2)             --------->YAB1   --------->SPL7          <---------DOF5.7(2) <---------ANAC46       --------->At4g35610    --------->ANAC58 <-------MYC3--------->DOF5.7(2)     - -----GLK1(2) ----------->HVH21 --------->TOE1(3)   <---------SPL7         --------->TOE2(3)    ----- ---GT1    <---------ARR11(3)   --------->TOE2(3) --------------->AtSPL3   --------->YAB1  --------->ANAC58   ttttcgtctagaagatatgacgaattagctaaaacctaaaaataaatacacggccgtacgcggccacatgttgccaacgataacgcattcctcatgccaa  25965200                                                                                                 <---                                                                                                 <---                                                                                            ------>ZmHOX2a(2)                                                                                           <------ZmHOX2a(2)                                                                                          --------->ARR11(3)                                                                                          <---------ARR11(3)                                                                                          <---------AGP1                                                                                     --------->YAB1  <---------YAB1                                                                   --------->AHL20(1) --------->AHL20(2)                              ---------->DOF2                   --------->AHL20(2) <---------AHL20(2)                      --------->ATHB12                          <---------AHL20(2) -------->AHL20(2)             --------->YAB1 <---------TOE2(3)                   --------->YAB1<---- ---->ICU4   <---------------AGL15 --------->AHL20(2) ----------->GT1 --------->YAB1<---------YAB1   aattaaaattctcatctaatataagaagactaaacataaaaattgattaagaaaagaagaaaaacacactaagcatacttcccattataatagatctcat  25965300                                                                                    -------->P                                                                                   ------->GAMYB                                                                                  <---------MYB111(2)                                                                                  --------->MYB46(3)                                                                                  <---------MYB55(2)                                                                             --------->AtMYB61                                                                             <---------ALFIN1                                                                           ----------->RAV1(1)  -----                                                                          --------->DEAR3(1)    -----                    <---------WRKY18(1)                                   <---------ALFIN1      -----                   --------->WRKY12                 --------------->AGL15 --------->AtMYB61 <--------                   --------->WRKY38(1)              <---------------AGL15--------->MYB46(3)<---------            --------->WRKY12              ---------->ID1             --------->ANAC58   <---------ALFIN1            --------->WRKY38(1)   <---------ANAC58 ----------------->AGL1<------NtERF2<---------ALFIN1 --------ARR10     ----------->HVH21  --------------------->WRI1     --------->ANAC58 ------->GAMYB ------ARR11(1)>>>>>>>>>>>>WRKY18 <---------ANAC58 ----------------->AG--------->PCF2 --------->AtMYB61 -----CCA1(2)<---------WRKY18(1)<-----------GT1  <-----------GT1     --------->ANAC46--------->MYB46(3)   atctatccaatccattgaccattgaccagttttttttcttgtttgttttttttgccatattgagtcaatacaggcaccaccacaacaaccacactttcac  25965400                                                                                        --------->ANAC46                                                                                        --------->ANAC58                               <---------ARR11(3)                                    <----------CDC5                               --------->ARR14(2)                                  --------->ANAC58                               <---------GLK1(2)                                   --------->ANAC58                               --------->ARR11(3)                           <---------ARR14(2)                               <---------ARR14(2)                           --------->ARR11(3)                              <------ZmHOX2a(1)                          --------->AHL20(2)                <---------ANAC58                                         <---------AHL20(2) -------->P ---->ANAC46    <---------ANAC46                                        --------->YAB1  --------->ANAC58 ---->ANAC58    <---------ANAC58                             <---------ICU4 --------->ARR14(2) ---->ANAC58   <---------TOE1(2)        <----------DOF2     <---------AHL20(2)     --------->ANAC46 ---HVH21      <---------TOE2(2)  <-----------GT1           --------->AHL20(2)   <---------ALFIN1 -DOF2   <<<<<<<<<<GT-3b  ---------->DOF2        <-----------GT1<-----------GT1 ------>ZmHOX2a(1)   ccaatttctatttttcttacgtttaaaaaaaaggattttcttctttatatttatccatactattaattactctattaaaatcctcacgctaagcaacccc  25965500                                                                                         --------->ANAC46                                                                                       --------->ANAC46                             <----------ID1                                            *TSS                             ----------->GT1                                           --------->ANAC58                      <---------------AGL15                                     --------->ARR14(2)                      <----------DOF2                                           ------>MYB46(1)                      --------------->AGL15                                     ------>MYB83                     --------------->AGL15                                    --------->AtMYB61                     <---------------AGL15                        ------->GAMYB--------->WOX13(1)                 <-----------GT1                                 <---------MYB52(2)    --------->ANAC58           <---------At4g35610                                   --------->MYB46(3)  <---------ALFIN1           --------->At4g35610                              --------->TOE2(3)------------>CBF     <---------MYB52(1)   ---------->DOF2            --------->AHL20(2)   --------->MYB46(3)   taatttcgttatcagcttaaaaccctttaaaaggaaaaaaaaaaacattcaacattttaaaacatcaacaaacccaaacaccaatccacacacaaaacaa  25965600                                                             <-------TEIL                                                            <------ZmHOX2a(2)                                                           --------->ARR11(3)                                                           --------->AGP1                                                           <---------ARR14(2)                                                          <---------GLK1(1)                                                     --------->DAG2                                                    ---------->DOF2                                                    --------->MYB52(1)                                                 --------->ANAC58                                                 <---------ANAC55(2)                                                 --------->ANAC58    --------->LBD16            <----                    --------->ANAC58     <---------ARR14(2)--------->ARR14(2)                 -------            --------->YAB1               --------->ARR14(2)<---------ARR11(3)          <---------ZAT18           <---------YAB1               <------ZmHOX2a(1) --------->GLK1(1)            <---------ZAT14         <---------ICU4    --------->ANAC58    <------ZmHOX2a(1)     <---------TOE1(2) --------->ZAT18        --------->ICU4     --------->ANAC58    ====================HOX2a_HOX2a--------->At4g35610     <-------TEIL   --------->ANAC58    ===========================HOX2a_HOX2a<---------At4g35610----   gacttgatacattattatcaagaagcaagaagcaagaatggaggattcaggacgtaaaggagatccatttccaggttttgagatgagagttcacaacgac  25965700                               <-----------HVH21                             <------NtERF2                            ------>NtERF2                            <---------ATERF1(1)                            --------->LBD16                            <---------RAP2.6(3)                           --------->ATERF1(2)                           <---------ATERF1(2)                          --------->RAP2.6(3)                          --------->ATERF1(1)                         --------->MYB52(1)                                             <---------DEAR3(1)                         ------>NtERF2                                              <---------LBD16                         <---------ATERF1(1)                                        --------->At4g35610                      <---------ZAT2                                            ------>ZmHOX2a(1)                ------>ZmHOX2a(2)                                               <-----------HVH21  <---------ANAC46    --------->ZAT2                 ------>ZmHOX2a(1)       ------>ZmHOX2a(1)  <---------ANAC58    --------->At4g35610         ---------->ID1            <---------ALFIN1  <---------ANAC58    <---------At4g35610 <---------GLK1(1)            --------->ARR14(3)      ------ -----YAB1     <------ZmHOX2a(2)          --------->GLK1(1)            <---------ARR11(3) --------->ATERF1(1) >GAMYB       --------->ARR11(3)         --------->ARR11(3)            --------->ARR11(3)<---------ATERF1(1) ----->ATHB12 <---------ARR11(3)         <---------ARR11(3)    --------->MYB46(3)   <---------At4g35610   gattgcgttttccgacgatctcttagctgccggcttcagagaagagctccttgtcctcttctcttaccaccaagacctcctccttcagcggaggctcctt  25965800                                                   ===============================HOX2a_HOX2a                                                   <------ZmHOX2a(2)                                                   =======================HOX2a_HOX2a                                                  --------->ARR14(2)                                                  <---------ARR14(2)                                               ------>ZmHOX2a(2)                                               ===================================HOX2a_HOX2a                                               ===========================HOX2a_HOX2a                                              --------->ARR14(1)                                              <------ZmHOX2a(2)                                              --------->CCA1(2)                                              ====================================HOX2a_HOX2a                                              ============================HOX2a_HOX2a                                             <---------ARR14(2)                                             --------->AGP1          --------->ALFIN1                   --------->ARR14(2)      <-----------RAV1(2)                  ----------->ARR10   --------->ANAC46                  --------->ANAC58                                          ------   --------->ANAC58                  --------->ANAC46                                          ------   ----------->HVH21                 --------->ANAC58                      ------>ZmHOX2a(1) --------   --------->ANAC58                 --------->RAP2.6(3)            ------>ZmHOX2a(1)         <------- >ZmHOX2a(1)                       --------->MYB52(1)         ---------->ID1  --------------------->WRI1   ctactacgacaggtgtttctacgtctacgttttgtcaaaacggcacagatccgatccctctcttgtctcctctcgtccttccttcgatgcttcaacctaa  25965900      --------->DEAR3(1)      --------->AtMYB61      <---------ALFIN1     --------->MYB46(3)   --------->AtMYB61   ------->GAMYB  --------->MYB46(3)  <---------MYB111(2)  <---------MYB55(2) ------>MYB46(1) -------->P ------>MYB83 >MYB83 >MYB46(1)                                                --------->ICU4         <---------AHL20(2) ->TOE2(3)               <----------DOF2      <----------DOF2                    <---------YAB1   <-- --MYB59     --------->ZAT6        <---------GLK1(2) --------->HSFB2a(2)   <----------DOF2  <--------   tccaaccaccacctctcactaattcttcttttgtctagattccttcttctttcttctgtaatgactattttgaaactcttttttttattgaaattttcaa  25966000                --------->ARR14(2)                 ------>ZmHOX2a(2)                <---------ARR14(2)                <------ZmHOX2a(2)            <-------TEIL                         <---------ARR14(2)                               ---    <---------TOE1(3)                            <---------ARR11(3)                 <---------AHL20(2)    <---------TOE2(3)<---------MYB52(1)          --------->ARR14(2)   <---------YAB1--------->AHL20(2) -------ARR11(3)--------->GLK1(2)                --------->ARR11(3)<---------YAB1<---------ARR11(3) ---GT1    --------->CCA1(2)                 ---------->DOF2     --------->YAB1  --------->ARR11(3)   catattaacgtagatacaaatctgttattgtctctatacaaatttcacaaagatcgtcttctctcaatcttgattatactgaagattttattttgttaac  25966100  Previous    Next  AGI:  At1g69050.1    Description:  unknown protein Range:  from: 25965587    to: 25966011    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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