Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        ---------->ID1                                                                  --------->ANAC55(2)                                    <----------DOF2               <---------ANAC58                                    --------->TOE1(3)             <---------ANAC55(2)                                    --------->TOE2(3)             <---------ANAC46                      ---------->DOF2        -------->P           <---------ANAC58--------->ANAC55(2) <----------ID1      --------->AtMYB61     --------->MYB46(3)     <---------ANAC55(1)             <-- ------->YAB1      >>>>>>>>>MYB2 <---------ARR11(3)     ---------->DOF2           <---------ANAC55(2)   ataacaacaagaagctaagaaaaccaaagcagcaataactttaaaacaaccatatatcaaaagtgattacttgttccatttcttatgtaatgaagtgttc  25913700                                                                             <----------DOF2                                                                          ------>MYB83                                                                        --------->MYB46(3)                                                                        <---------MYB55(2)                                                                    <-------TEIL                                        ------>ZmHOX2a(1)         <---------ARR14(2)                         ======================HOX2a_HOX2a        --------->ARR14(2)        --------->At4g35610          ---------->ID1           <---------At4g35610              <-----        <---------At4g35610      <---------ANAC58        <---------GLK1(2)------>MYB46(1)      <-----   <---------ZAT2        ------>ZmHOX2a(2)              --------->YAB1 --------->ANAC58        ------   --------->ZAT2       <---------GLK1(1)               <--------ATHB1 --------->ANAC46       <------   <---------At4g35610 <---------ARR11(3)              <---------ATHB12--------->ANAC58       -------   --------->At4g35610 --------->ARR11(3)              --------->ICU4<-----------GT1          ------- -------LBD16    ---------->DOF2 <---------ANAC58 <----------DOF2 <---------GLK1(2)     --------->YAB1   ttcggagctgagctaattgcaaagtgatctctgagacttgtcctctagactgcttcaatgattctgcagattcacccaactttccttcaataacaatata  25913800                   --------->ARR11(3)   --------->LBD16 <---------ARR11(3)  <---------ANAC55(1)  <---------ANAC58--------->RVE1(1)  <---------ANAC46--------->GLK1(1)  <---------ANAC58<---------GLK1(1)  --------->ANAC55(2)                                                          <-----------HVH21 ----YAB1 <---------AtLEC2       <-----------HVH21                             ------>ZmHOX2a(1) ----AHL20(2)     <---------CCA1(1)                            --------->ARR14(2) --->AHL20(2)     <---------RVE1(1)                   <---------ALFIN1     <---------ALFIN1 ---AHL20(1)      --------->CCA1(1)                 ----------->RAV1(1) <---------ALFIN1            - -->AHL20(1)     <---------ARR11(3)           --------->At4g35610   --------->TOE1(1)              <- -->AHL20(2)     --------->ARR11(3)           <---------At4g35610   --------->TOE2(1)             <--   atttccgtgtttgcaagaagatatcttgtaagaagtgtcaactatttgagcttccaacacatccaaaacctcgtccacctccttcacttctgactccaat  25913900                          <---------DAG2                     ---------->DOF2                                                  --------->ANAC58                  <-----------HVH21                                                   --------->ANAC58            <------ZmHOX2a(2)                                                  <---------ICU4            ===============================HOX2a_HOX2a                      <---------ICU4      --------->MYB52(1)  <----------DOF2                                  <---------YAB1  ----------  --------->LBD16--------->ANAC58                             <---------ALFIN1<---------YAB1 -------->ANAC46 --------->ANAC58                     <---------ANAC55(2)  <------ZmHOX2a(2) --------At5g28300--------->TOE2(3)               --------->GLK1(2)       --------->ARR11(3) ---------GT1    --------->ANAC46   <------ZmHOX2a(1) --------->ANAC55(2) <---------ARR11(3)     <---   ataccgcataacagatcaaacgtcaaagctttttcaaaggatgctggagaagaatcaagtgtccccatcccttcaagatcattatcccatgccaaaagat  25914000                          <---------DAG2                          <----------DOF2--------->ZAT2                  <-------TEIL           <---------At4g35610                 <---------ARR11(3)    --                <---------ARR14(2)       --------->At4g35610            ------>ZmHOX2a(1)    <------- >DOF2          --------->ARR14(2)  --------->YAB1                     --------->TOE2(3)    ------>ZmHOX2a(1) ----TEIL  --------->AtLEC2   --------->ZAT6        --------->ZAT6  <---------ARR11(3)     --------->TOE2(3)   gcataagaagaacatgcagattcatcaacttttcactagtataagctgagtctatctctagttttgtcaacatcctcaacatctcttgctcttcctcatt  25914100                                        ------>ZmHOX2a(1)                                   --------->GLK1(1)                                   <---------GLK1(1)                                 --------->ATHB12                                 <---------ICU4                                <---------YAB1                                         ----------->GT1                                <---------ATHB12                     ---------->DOF2   --------->ANAC58 ---->ZmHOX2a(1)                --------->ICU4                ---------->DOF2          --------->ANAC58 --ICU4---------->DOF2   ------>ZmHOX2a(1)                  --------->YAB1        <------ZmHOX2a(1)   cctactagacaaagcttcaaaatagtcctccctaatgatttcctccattcttggcctaaaaatcaaaagttcaaagcttagctaggaacaagaaaaaaaa  25914200                                                                         --------->ZAT6                                                                      ------>ZmHOX2a(1)                                    <---------ARR11(3)         ------------>CBF                      ----------->GT1                        --------->ARR14(2)             ----------->GT1    --------->ZAT6               <---------ARR14(2)       ------------>CBF        --------->AHL20(2)   ----------->HVH21              --------->GLK1(1)   --------->YAB1   actaatccaaaaaaatggatacttaggtgaaatgacactatctttctaatgcgaggtatcgcagttccaatcctagcactagtcatagctcaattcttct  25914300                                              <------------CBF                                             --------->ATHB51                                             <--------ATHB1                                             <---------ICU4                   --------->At4g35610       --------->ATHB12               <xxxxxxxxxxxxxxxxsmallRNA(i)  -------->HAHB4              --------->YAB1                <---------ATHB12          -------->ATHB1                    --------->ICU4          --------->YAB1                    <---------AHL20(2)          <---------ICU4                    <---------ATHB51         <---------ATHB12                   --------->AHL20(2)        ------>MYB46(1)               --------->ANAC58        ------>MYB83                  --------->ANAC46                         <---------YAB1       --------->WOX13(1)             --------->ANAC58             --------->ANAC58     ------------>CBF------->GAMYB    --------->AtLEC2             --------->ANAC58--------->YAB1   atatgaaaccaatcattcatcaactgaaaccagaacatccaagcaaataattgaaaatgtaatccaagtacccaaaaacacattatagtaagtgcaacta  25914400                                                                                          <-------GAMYB                                                                                     ================                                                                                     --------->ANAC58                                                                                     =============MYC_MYB                                                                                     --------->ANAC58                                                                                --------->ANAC58                                                                                --------->ANAC58                                    ----------->GT1                             --------->ANAC46    <                             ---------->DOF2                       ---------->DOF2   --------->O2 <--           <----------DOF2--------->ANAC58                         ============================bZIP_DOF       ------>ZmHOX2a(1)  --------->ANAC58                       --------->ANAC58    --------->bZIP60(2)      --------->TOE2(3)--------->TOE2(2)                         --------->ANAC58    --------->TGA1a-     <---------ICU4    --------->TOE1(3)             --------->ARR14(2)       =================bZIP_DOF   <---------ARR14(2)  --------->TOE2(3)             <---------ARR14(2)       ---------->DOF2 <------   --------->ARR14(2)  --------->TOE1(2)             --------->GLK1(2)        <---------ATHB12<------   aatcaaatccttactttgaacaaaacctaagcaaagagaagtgaaatttgagaagaatccacttgtcaagaaagagaccaataagccaagtcagttaatg  25914500                                            --------->ICU4                                    ----------->RAV1(1)                                  --------->MYB46(3)                                 <------ZmHOX2a(2)                                 --------->CCA1(2)                                --------->AGP1         ---------->DOF2        --------->ARR11(3) ===================bZIP_DOF    <---------ARR11(3)                                       --------->TOE2(3) ---------ANAC55(2)             <---------ARR14(2)              <-----------GT1          --------->TOE1(3) ---------GT1                   --------->ARR14(2)       <-----------GT1                 --------->YAB1 -------->ANAC55(2)            --------->GLK1(1)       <---------AHL20(2)           <----------DOF2 ---TOE1(3)                    <---------GLK1(1)       --------->AHL20(2)     <-------TEIL  --------- ---TOE2(3)               ---------->DOF2   --------->GLK1(2)  --------->AHL20(2)   <---------DAG2   ttacatacttgtaaagactcagcattttcaaagagatccaccagaaattcttactaatttaacaatttactacaacgagattcaaactttaccataaaac  25914600  Previous    Next  AGI:  At1g68910.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G11390.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15349.1) Range:  from: 25911794    to: 25914148    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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