Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                <-----------GT1                           --------->ARR11(3)                     --------->YAB1                <---------REM1(2)                                               --------->ANAC58               <---------------AGL15                                            --------->ANAC46               --------------->AGL15                                            --------->ANAC58               <---------HSFB2a(2)                                         --------->ZAT14               --------->HSFB2a(2)                                     --------->ZAT6        <---------RVE1(1)  <---------ARR11(3)        <---------MYB46(3)--------------->AtSPL3        <---------CCA1(1)  <---------AHL20(1)     --------->YAB1       --------------->AtSPL8       <---------ARR11(3)  --------->AHL20(1)    <---------YAB1      <-----------GT1                <       --------->ARR11(3)--------->GLK1(2)       --------->ICU4   <----------DOF2               <----   tgatgcagagatattttctacaaggagaatattttctatttcttataagttatgatggtttctaatttctttaacagtactcacacaaacaggttccaaa  25911200                                                                                                <----                                                                                                <----                                                            --------->ANAC58                    -----                                                            --------->ANAC58                   ------                                                         <------NtERF2                         <-----                  ------>NtERF2                        <---------RAP2.6(2)                     <-----        --------->MYB46(3)                            --------->SPL7                           ------     <---------WRKY38(1)  <------ZmHOX2a(1)          --------->ALFIN1                      <------MYB83 ---------At5g28300   <---------MYB52(1)      --------->DOF5.7(2)                          <------MYB46(1) -----ICU4--------->GLK1(2)                   <---------MYB52(1) --------->ATHB12      <-----------RAV1(1)   attacagtcaacaatcttgcagcccttaggacagtacttgatgcattcgttatctgtgcggcaagactcattggtctcatatatgtccattgttggtgct  25911300       --------->ANAC58       --------->ANAC58                                                                --------->ANAC58 -----------AGL15                           ------>NtERF2                              --------->ANAC58 ------DOF2   <---------At5g28300           <------NtERF2                            <---------ALFIN1 ---------->AGL15                          --------->RAP2.6(2)                      <------NtERF2 ----------->AGL2                 <------ZmHOX2a(1)     <-----------GT1             <---------ZAT18 ------------AGL2              <---------ICU4<------NtERF2                        --------->ANAC46  - ------------AGL3       <----------DOF2    --------->DEAR3(1)            <---------CCA1(2)---------->DOF2 ----------->AGL3    ------>ZmHOX2a(1)    <---------RAP2.6(2)    <----------DOF2 <---------LBD16    -   ataagaggcaagcagttacagtccttctttccatcaggacaatggccgcctatgcaattcacttcttctttcgccatctctctcgcggcactcaaagaca  25911400                      <---------AHL20(2)             --------->ANAC58             --------->ANAC58             --------->ANAC46          <---------ZAT14          <---------ZAT18          <-------TEIL--------->AHL20(2)               <---------AHL20(2)          --------->ZAT14                   --------->ANAC58          --------->ZAT18                   --------->ANAC58                           <---------ICU4 -------->TOE1(3)  --------->YAB1         ---------->DOF2                  <---------YAB1 -------->TOE2(3) <---------YAB1         --------->AtMYB61    ---------->DOF2      <------ZmHOX2a(1)   aaccttcacaagtacacaccataataaaacttcaaaacaaaaaccaaagcaaaacattttataacaaagaagaagtttttatagaggaagcattacacaa  25911500                                                                      <-----------ARR10                                                                      <---------ARR11(3)                                                                      --------->GLK1(2)                                                                --------->TOE1(3)                                                                --------->TOE2(3)    <----------DOF2                                                             <-----------GT1 <---------ANAC58       <-----------HVH21    --------->ANAC58              --------->YAB1     <---------ANAC58  <---------YAB1            --------->ANAC58            <------------CBF <----------DOF2           --  ----------->HVH21    <----------ID1                  <---------ICU4 --------->ARR11(3)          ---   tgctatgactgtgagggagaacaagaagacaagcttgagagacgttttctccattactaattgtaacctcaaaatcttttcttgtttcttttttttttgt  25911600                                                                                   ------>MYB46(1)                                                                                 <---------------AGL15                                                                                 <---------MYB59                                                                                ----------------->AGL2                                                                                ----------------->AG                                                                        <---------TOE2(3)                                                                        <---------TOE1(3)                                                                     ----------->HVH21      <--------                                                                 <---------ANAC46--------------->AGL15                                                              <----------DOF2   ----------------->AGL3                                                           <---------ARR11(3)   <-----------------AGL2                        --------->KAN4(2)               --------->MYB46(3)      ----------------->AGL1                     <------------CBF                 ----------->RAV1(1)       ===================== ------->DAG2        <---------GLK1(2)     ----------->GT1 --------->ARR11(3) <-----------GT1 <------ ------->DOF2      <---------YAB1     ---------->DOF2<----------ID1<---------ANAC46------>MYB83   <--   aaaagtgatgaacagagaattcagattgttctcttatagagaaagaagttaaatggcaacaaatcttttgtgtgaaggttttaccaaatttagtctgatt  25911700                                                <------------CBF                                    <---------GLK1(1)                                    --------->GLK1(1)                                  <------ZmHOX2a(1)                         <-----------------AG  <--------ATHB1                       --------->ANAC58        <---------ICU4                       --------->ANAC58        --------->ATHB51                       --------->ANAC46        --------->ATHB12                    <------ZmHOX2a(2)          -------->HAHB4                        <---------ALFIN1                    =====================HOX2a_HOX2a                                ------>MYB83                   <---------ARR11(3)         <---------AHL20(2)                    ------>MYB46(1)                   --------->ARR11(3)         --------->ICU4                        -------->P   <---                  --------->At4g35610         <---------YAB1                       ----------->RAV1(1) -YAB1            <---------bZIP60(1)         <---------ATHB51                    --------->AtMYB61 ==========================================MADS_MADS                      ----------->GT1      <----- ---GLK1(2)       --------->bZIP60(1)    <---------ANAC55(2)             <------ZmHOX2a(1)    ------- --------DOF2     <---------At4g35610    --------->ANAC55(2)    <-----------TBP  --------->MYB46(3)   cttttttagtccaactggtgagatcactccatcttaggaaatcacttaataattgaaatgtgttgtttttgtagaggagataaaccaacacttgagatac  25911800                                                                                                    <                                                                                             ------>ZmHOX2a(1)                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            <--------                                                                                     --------->AHL20(1)         <---------ICU4                                                              <---------AHL20(1)         <---------AHL20(2)                                                          --------->ARR11(3)        --------->AHL20(2)                                                           <---------ARR11(3) <---------ANAC58                                                                   --------->CCA1(2) <---------ANAC46                                                  --------->ANAC58<---------ARR11(3) <---------ANAC58                                   <---------ANAC46             <---------TOE2(3) -- ---------CBF                                       <---------ANAC58        --------->ZAT6 ---------- --TEIL --------->ICU4         <-----------GT1      <---------ANAC58 <---------ARR11(3)    ---------- -->CCA1(2)       <---------ARR11(3) ------------>CBF              --------->ANAC58--------->ARR11(3)   attgcttgtaataaatacaagataaatgagtatttacaacacaatgtacaaatggcgaatgctatggccaagacattttcactaagatatatttccttaa  25911900        ---------->DOF2      --------->ANAC58      --------->ANAC58    --------->ANAC58    --------->ANAC58 -----------HVH21                                                               ------>ZmHOX2a(2) ------>AGL15                                                             <---------At4g35610 >TOE2(3)                                                              <----------DOF2 >TOE1(3)                                                          <---------WOX13(1) -------AGL15                                                    --------->ATHB12 ------->ANAC46          --------->At4g35610                    <---------AHL20(2) ------->AGL3         ---------->DOF2    --------->RAP2.6(2)    <---------YAB1--------->ARR11(3) ------->AGL1        --------->MYB52(1) --------->ZAT18<------------------------ANAC81    <----------DOF2   taagtcacaccaaagaatgaacaaaacagcacaaaaactaaggccacaactagtatgtgtttcaatttgattgctcttctgatctcgctactcttttcag  25912000                                                    --------->ANAC58                                                    --------->ANAC58                                                  ---------->DOF2                                         ------>ZmHOX2a(1)    ----------->RAV1(1)                --------->ARR14(2)     ----------->RAV1(2)    <---------ALFIN1        <----------DOF2               ------>ZmHOX2a(1)---------->DOF2                           <---   acacagactgcttctctggttcttcccttgttctctcatcctcctgttcaaagaaagcaaagacccacataagattagtaaccaagagatgtctggtttt  25912100  Previous    Next  AGI:  At1g68907.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G68905.1) Range:  from: 25911171    to: 25911554    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g68910.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G11390.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15349.1) Range:  from: 25911794    to: 25914148    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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