Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                            --------->ARR11(3)                                                                                          <---------ARR14(2)              --------->ARR11(3)                                                          --------->ARR14(2)             --------->YAB1                                                              <------ZmHOX2a(1)    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                         <---------ANAC46<--  <---------YAB1   <-----------GT1                          --------->TOE2(3) --------->YAB1    <---- <-----------GT1<---------ICU4                              --------->TOE1(2)<---------ATHB12   <---- -----MYB52(1)<---------ARR11(3)                          -------->P        ------>MYB83----------->ARR10 -----DOF2  <---------ATHB12                     --------->DAG2             ------>MYB46(1)     <---- -->TOE2(3)<---------TOE2(3)                    ---------->DOF2           --------->AtMYB61--------->CCA1(2)   tattttcatttctaatgatatttacaagttttgcaaaaaaaaaaaaaaaaaaaagttagcaaccttggagtctcgaccaatcttgaggggaggatatggc  25885700                                     --------->bZIP60(2) --------->ANAC58                                   <---------ALFIN1      --------->ANAC58 -------YAB1                    <-----------GT1      <-----------HVH21 -----ANAC58            <---------HSFC1(1)     ----------->RAV1(1) -----ANAC46            --------->HSFB2a(2)    <---------ALFIN1 -----ANAC58            <---------HSFB2a(2)   <---------ZAT18 <------NtERF2        --------->ZAT6   atgaatgatgtaattgtagagtcattctcgaaattcaccacttcatagcccacattgtcaaggcaccattcaagcttacaaattagcagtagtctgcctc  25885800                    <------------CBF                --------------->AGL15                <---------------AGL15                                       --------->ARR11(3)                --------->HSFB2a(2)          --------->LBD16     --------->AHL20(2)   --------->TOE1(3)               <-----------------AGL1  <---------ANAC58          <---------AHL20(2)   --------->TOE2(3)               <-----------------AGL2  <---------ANAC58      --------->AHL20(2)    <-----------GT1     <---------HSFB2a(2)          <------MYB83 ---------->DOF2--------->YAB1<---------ARR11(3)     --------->HSFB2a(2)          <------MYB46(1)        --------->MYB46(3)--------->GLK1(1)  -------   ttatcgtctcgaagttttctggtattggtataagctaggtttcgttccccaaaggtcgaaccattaataaatgactgaaatcttttaacctcaaaacaga  25885900                                                                                                 <---                                                                                              <------MYB83                                                    --------->ANAC58                          -------                                                    --------->ANAC46                --------->ANAC58-                    --------------->AGL15           --------->ANAC58                --------->ANAC58-               --------->GLK1(1)        --------->LBD16               --------->HSFB2a(2)     <------MYB46(1)            --------->ANAC58           <---------HSFB2a(2)            <---------HSFB2a(2)    <------- <---------ANAC55(2)<---------------AGL15        <-------TEIL     <---------ANAC58  --------->ANAC46- ---->GT1   --------->ANAC58           --------->HSFB2a(2)        <---------ANAC58--------->ANAC46---   aatatgtaaactgaacgaaatccaaaatatagtaatgtgttcccgaacagattcaagcgacttatagtgcttctggcaaacctcacacgactaggctggt  25886000          --------->ANAC55(1)          --------->ANAC55(2)          <---------ANAC55(2)          --------->ANAC46          --------->ANAC58          --------->ANAC58         <-------TEIL     <---------------AtSPL8     <---------------AtSPL3     --------------->AtSPL3 ------WRKY38(1)            <---------------AtSPL3 -->At4g35610        <---------ANAC58 -------->ANAC58     <---------ANAC58                                                          ------ -------->ANAC58 <------------CBF         <---------MYB52(1)             <---------ARR14(2)   ------- --MYB46(3)    --------->MYB46(3)   <---------ANAC58            --------->GLK1(2)             <------ -------->ANAC46<---------ICU4 <---------AtLEC2                 --------->ARR11(3)   <------------CBF ------>MYB52(1)--------->ATHB12    <---------ANAC58           <---------GLK1(2)    <---------ICU4   gaacggaatggtacgtaaccattgctagaggttgtatggcttcagtttgttcagttcaagtacaagaatcttggggatttttgtgaacattgcggtatga  25886100                                                                                <------MYB46(1)                                                  ----------->GT1               <------MYB83                                                 --------->LBD16               --------->MYB59                                               <---------LBD16                 --------->MYB46(2)                                               --------->LBD16                 --------->MYB111(2)                                             --------->LBD16                   <---------AtMYB61                                             <---------LBD16                   <---------MYB46(3)----                  --------->DAG2           <---------LBD16                    <---------MYB55(1) ----   --------->MYB52(1)                   <---------WRKY18(1)                   <--------P        <---- --->ATHB12      ---------->DOF2       ----------->HVH21                --------->MYB52(1)     ------ -->ICU4   --------->ALFIN1       <---------ARR11(3)              <---------GLK1(2)      ---------->TaMYB80 ---YAB1   ----------->GT1        --------->ARR11(3)          --------->CCA1(2)--------->MYB111(1)   ttagccatcggaagtgtgaaaaagtcgcaaaacagagatgtttgacccgcgcgggtttaaaacgatacgattctcaacgggttggtaagggtttatccgt  25886200                                              xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                 --                                              <------ZmHOX2a(1)                                    --                                           --------->HSFB2a(2)                           <---------TOE2(3)    --------->ZAT6                 <-----------GT1                                    <--------P   -- ----->REM1(2)                    <---------ZAT14                                    <-------GAMYB -- ----->ZAT14        <XXXXXXXXXXXXXXXXXXXXXMIR833-3P     <---------ANAC58           <---------TOE1(3) -----MYB52(1)      <---------TOE1(2)      <---------HSFB2a(2)                     <---------TOE2(3) --->LBD16          <---------TOE2(2) <---------ZAT6    <---------ANAC58     <---------TOE2(3)     <-   gaagtctcactactcccagtcgtatgttgacatgggtttactgttcgaggagacacttacttacgctcagttcatggtagaggttagggttgatgttgtt  25886300                         --------->ANAC58                      <------NtERF2                     ------>NtERF2                    <---------RAP2.6(2)            --------->ANAC58                      ------>NtERF2                    <---------ATERF1(2)          <--------P                             <---------ETT(1)                    --------->ATERF1(2)        <------MYB46(1)         <---------ANAC46 --------->LBD16            --------->ATHB12                   <------MYB83         <---------ANAC58    --------->ANAC46           <---------YAB1--------->ANAC58    <--------P        <---------ICU4           ----------->HVH21   --------->ANAC58 <---------DEAR3(1)   <---------ANAC58      --------->ATHB12        <---------HSFB2a(2)   --------->ANAC58--------->ATERF1(1)   <---------ANAC46     --------->ICU4   <---------ANAC58     < ------->ANAC58    <---------ABI4(1)     <---------ANAC58     <---------YAB1   <---------ANAC58  <--- ------->ANAC46  <---------DEAR3(1) <---------ANAC58        --------->YAB1 --------->GLK1(1) -------- ------->ANAC58--------->ALFIN1     <---------ANAC58    --------->ICU4<---------LBD16  --------->HSFB2a(2) ------->ANAC55(2)<---------PCF2 <---------GLK1(2) --------->ANAC58 <---------ANAC58<-----------GT1-- --------ANAC55(2)<---------ATERF1(1)   --------->MYB52(2) <---------YAB1  <---------GLK1(1) --------   tacgcaagcgagcatgagtggggcggcaagaaactgattcgttccttgttggtaagtaagtatgattattgcttcgggtttccttgtttcccgacacgat  25886400                                                                                             ========                                                                                  --------->ZAT14                                                                                  --------->WRKY12                                                                                  --------->WRKY38(1)                                 ===================================HOX2a_HOX2a   <---------ZAT18                                 ------>ZmHOX2a(2)                              --------->LBD16                                ====================================HOX2a_HOX2a<---------ANAC58  ----     --------->YAB1             <------ZmHOX2a(2)                              <---------ANAC46 -----    --------->ICU4             <---------ARR11(3)                           <---------SPL7   ========   <---------TOE2(3)           <---------AGP1                          <------NtERF2         <------ZmHOX2a(2)  --------->YAB1               --------->ARR11(3)    --------->ETT(2)  --------->ZAT2       <-------- ---------YAB1 <---------------AGL15        <---------ANAC58           <---------ZAT2       --------- ----TEIL      ====================================================================================== ->ANAC58      --------------->AGL15   ----------->RAV1(2)            --------->ANAC58     --------->At4g35610 ------->TOE2(3)         --------->CCA1(2)  <---------ANAC58          --------->ANAC58     <---------At4g35610 ->ANAC58   <-----------GT1--------->CCA1(2)<---------ANAC46 <------ZmHOX2a(1) <---------ANAC58 <----   tcattaatgatgttttaccatttgaagagataagatctcacatctggcgaggttgacgaccgaggacaaggccagcatcgtccgtggactagcagatcac  25886500                       ---------->DOF2                      <---------WRKY38(1)                      <---------WRKY12                     <<<<<<<<<<WRKY40                     <<<<<<<<<<WRKY18     <---------At4g35610 =================HOX2a_HOX2a                 <---------MYB46(3) ----------->AGL15   <<<<<<<<<<WRKY62        <---------MYB52(1)      <---------------AtSPL3 ---->ANAC55(2)      --------->WRKY18(1)    <-------GAMYB----------->GT1       <---------AHL20(2) ====================HOX2a_HOX2a           <-----------RAV1(1)       <---------------AtSPL8 -ARR11(3)    <------ZmHOX2a(1)      --------->ARR14(2) --------->HSFB2a(2) --------->YAB1 >ARR11(3) <------ZmHOX2a(1)   --------->CCA1(2)        <---------HSFB2a(2)----------->GT1 ============MADS_MADS<---------WRKY45   ------>ZmHOX2a(1)    ---------->DOF2  --------->AHL20(2) -----ANAC55(2)     <-----------HVH21<---------ARR14(2)<---------ETT(2)    <---------ZAT6   ttaatgaagcagaggaggacttggtcaaagcagagatgggttcctctgttgttcatgtcgagaaaaaaggaatggtactgataaatttgatgagggtaag  25886600  Previous    Next  AGI:  At1g68845.1    Description:  unknown protein Range:  from: 25886097    to: 25886581    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version