Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                      <---------ICU4                                                   --------->ICU4                                                 <---------AHL20(2)                                                 <--------ATHB1                                                 <---------AHL20(1)                                                 --------->YAB1                                                 <---------ICU4                                                <---------YAB1                                                --------->ICU4                                              --------->YAB1                                            --------->AHL20(2)                                            --------->AHL20(1)                                         --------->AHL20(2)                                    <-----                               <---------MYB52(1)--------->AHL20(2)                          --------                         --------->GLK1(2) --------->YAB1                                   <--------                      <---------ARR11(3)--------->AHL20(2)   ----------->GT1                ---------                    --------->ANAC58    --------->YAB1      <---------YAB1                --------->YAB1 --AGL3             --------->ANAC58   <---------ATHB12     <---------TOE2(3)   --------->MYB46(3)   actatatataagttataaaaccaagaaattctcgttatccaataaaaataataattttgactatggttatatatcagtttcaacaacttatatgatgatt  25883600                                                                                                 ----                                                                                   ------->TEIL  ----                                                                                   <-------TEIL <----                                                                               --------------->AtSPL8                       <---------ANAC58                                        <---------------AtSPL8                       <---------ANAC46                                  <---------------AGL15  -----                  <---------------AtSPL8                                 --------------->AGL15<------                 ---------->DOF2                                  --------->ARR11(3)        ---------      --------->TOE1(3)<---------ANAC55(2)                        --------->AHL20(1)       --------->MYB52(1)    --------->GLK1(2)  --------->ANAC55(2)                        <---------AHL20(1)     <---------MYB52(2) ----WOX13(1)  <---------YAB1                                     <---------ARR11(3)     --------->MYB46(3) ->ATHB12   <---------AHL20(2)      ----------->GT1       <-------GAMYB ----------------->AGL3------- -YAB1<---------DAG2  <-------TEIL  <---------REM1(1) --------->ANAC46  ============================= >ICU4--------->TOE2(3)<---------ANAC58              --------->SPL7     ----------------->AGL1-------   gatgagaaccttattttatgaaagtacgtggtaatgtgttgtaagaaaatgttcttacgccgttgaaatatttttccaaaaaatgtacataacaaacgta  25883700                                                     <---------HSFB2a(1)                   --------->WRKY38(1)     ------->TEIL                                    --------->HSFB2a(1)                   ---------- ----->ANAC58                                        <---------HSFC1(2)                    --------->WRKY45 ----->ANAC58                --------->AHL20(2)      --------->HSFC1(2)       <---------MYB52(1) -----TOE2(2)    --------->ALFIN1              <---------LBD16--------------------->WRI1   --------->WRKY12 ---->SPL7      --------->LBD16          <-----------------AG ---------->DOF2 <---------ARR14(2)  --- ---SPL7  ---------->DOF2    <---------AHL20(2)--------->HSFB2a(2)           <---------RAP2.6(3)  --- ------>AtSPL3 <---------ANAC58          ----------------->AGL1             <---------ANAC58      --- -->TOE1(2)    <---------ANAC46          <-----------------AGL1             <---------ANAC58<-------- ==========================================================MADS_MADS     <-----------GT1  --------->DOF5.7(2) -->TOE2(2)    <---------ANAC58<---------YAB1  <---------HSFB2a(2)   <---------YAB1 ---------->DOF2 <   cgatatgtatgtaaaagccgtggtactacatttatttttgtctgcccttctcggaaacttccttcaaagttatttttgccgttcttgaaagcgttgaccc  25883800                                                       --------->AHL20(2)                                                       --------->YAB1                                                      <---------ATHB12 <----------DOF2                                     ------>MYB46(1) ->HVH21                                             ------>MYB83 --->MYB46(1)                               --------->TOE2(3)                                      -- --->MYB83                            <---------AHL20(2)          <----------DOF2                  <- ----->P                       ---------->ID1       --------->WOX13(1)                           ---- -WRKY18(1) <---------AHL20(2)<-----------GT1  ---------->DOF2 <-----------GT1                ------- ---------DAG2             <---------ICU4<-----------GT1      <-----------GT1              --------->CCA1(2)   tacctttccatttttaaaatgttctctcattttgacccatttttttccataaaccaatcaaattttaactttcaaaaacataaaactaattagatataaa  25883900                                                                                                   --                                                                                              <------                                                                        ---------->DOF2      --------         ------->TEIL                                                 --------->MYB46(3)     --------         <-------TEIL                                     --------->AHL20(2)                <-------- ------->YAB1    ------->PIF5                             <---------AHL20(2)         ----------->GT1 --------ICU4    <-------PIF5            <---------YAB1   ----------->TBP           --------->DAG2--- ----->AHL20(2)------->TEIL            --------->YAB1   ----------->TBP--------->TOE1(2)  *TSS<------ -->AHL20(2)--------->AtLEC2     ------>ZmHOX2a(1)<----------DOF2    ------->TEIL  ---------->DOF2<--   ataataacatgtacatgcacttgcctcgtccattcctcacatcatcatatgtctttgtatatatatagatgaaccaaagaaatgaaaaagtaacaacgtc  25884000                                                                           --------->GLK1(2)                                                                           <---------ARR14(2)                                                                           --------->ARR14(2)                                                                           --------->ARR11(3)                                                                           <---------ARR11(3)                                                                          <---------GLK1(2)  <---------CCA1(2)                                                 <---------ANAC46 ------->TOE2(3)                                                    <------MYB46(1) -----HVH21                                        <---------YAB1   <------MYB83 ->ANAC46                                  ----------->GT1         --------->MYB46(2) ->bZIP60(2) --------->ANAC46             --------->DAG2           <---------AtMYB61 ---STF1     --------->ANAC58           ---------->DOF2     <---------ANAC46      --------->ANAC58 ------>At4g35610                   --------->At4g35610     <---------ANAC58      --------->ANAC58 -----TGA1   --------->ANAC58       <---------At4g35610     <---------ANAC58      --------->ANAC46 -------ANAC55(2)              <----------DOF2  <---------YAB1     <---------MYB46(3)         -------   acctaaatctctctcacccaatttgtgtttcttctttctgctaaaaggttataatttttgtttcttggtttggtgagaatcttcaagaaactgaaacaaa  25884100                                                                                                    -                                                                                                    -                                                                                                 <---                                                                                                 <---                                                                                                <----                                                                                              <------NtERF2                                                                                             <-------                                                                                             <-------                                                                                             <-------                                                                ------>NtERF2                <-------                                                               --------->RAP2.6(2)           <-------                                                               ------->GAMYB                 <-------                                                               --------->DREB2C(2)           ------>NtERF2                                                            <---------ALFIN1                ---------                                                            --------->DEAR3(1)              <--------                                                            --------->AtMYB61               <--------                                                           --------->MYB46(3)               <--------                                                           <---------ABI4(2)                <--------                                                           <---------MYB55(2)              <------NtERF2                                                          ------>NtERF2                    --------->ATERF1(1)                                                          <---------ATERF1(1)             <---------ATERF1(1)                                                         <---------ALFIN1                 ------>NtERF2                                                         --------->DEAR3(1)               <---------RAP2.3(1)                                                       ------>NtERF2                     <---------DEAR3(1)                                                       <---------ATERF1(1)              <---------LBD16                                                      --------->ANAC46                  --------->LBD16                                             <---------ARR11(3)--------->DEAR3(1)      --------->ANAC46                                             <-----------ARR10 --------->ANAC46       <---------LBD16                                            <---------GLK1(2)--------->ABI4(1)     <---------ALFIN1 -                                        --------->ZAT14--------->LBD16   <---------ARR11(3)<---------ABI4(1)                                      --------->ANAC46--------->ANAC58   --------->ARR11(3)------>NtERF2               <---------ANAC46     <---------ALFIN1  --------->ANAC58  --------->At4g35610--------->RAP2.3(1)     <---------GLK1(2)      ----------->ARR10--------->GLK1(2)--------->MYB46(3) ------>ZmHOX2a(1)  < --->DOF2      <---------AtLEC2   ------>ZmHOX2a(1)  <---------LBD16 ---------->DOF2------>ZmHOX2a(1)   gaaaatggattctagttgcatagacgagataagttcctccacttcagaatctttctccgccaccaccgccaagaagctctctcctcctcccgcggcggcg  25884200                                   <---------ANAC58                                   <---------ANAC46                                --------->DEAR3(1) -------->ANAC58               --------->At4g35610 -------->ANAC55(2)         <---------ZAT2 ------MYB52(1)             --------->At4g35610 ------SPL7                 --------->ZAT2 -------HVH21           <---------MYB46(3) --ATERF1(1)            ------>NtERF2 --RRTF1(1)           <------NtERF2<---------ANAC58 --RAP2.3(1)          <---------LBD16                                           -------->P --ERF1--------->MYB52(1)   <---------At4g35610                              --------->At4g35610 --DEAR4(2)          <---------RAP2.3(1)                                     <---------At4g35610 --ORA47(2)          <---------DEAR4(2)             --------->RAP2.6(3)     --------->ANAC58 >DEAR3(1)          <---------RAP2.3(2)            --------->MYB52(1)       --------->ANAC58 -RAP2.3(2)         <---------DEAR3(1)          --------->LBD16           ---------->DOF2 -DEAR3(1)--------->LBD16<------NtERF2         --------->LBD16          <---------ANAC55(2) -RAP2.3(3)        --------->At4g35610       ------>ZmHOX2a(2)          --------->ANAC58 -ANAC46<---------LBD16<---------ANAC46     <------ZmHOX2a(2)           --------->ANAC58 -------->ANAC58   --------->ATERF1(1)     <---------ARR14(2)           --------->ANAC46        ----- ---------ANAC55(2)<---------At4g35610     --------->ARR14(2)  <-----------------------TaNAC69(2)   ttacgcctctaccggatgggaagcggcgggagcagcgtcgtgttggatcccgagaacggcctagagacggagtcacgaaagctaccatcttcaaaataca  25884300                                                --------->ANAC58                                            <---------HSFB2a(2)                                        ------>ZmHOX2a(2)                                       <------ZmHOX2a(2)                                       --------->CCA1(2)                                      <---------AGP1                                      <-----------ARR10                                      <---------ARR14(2)                                      --------->AGP1   ------>MYB46(1)                                      <---------ARR11(3)                                      --------->ARR11(3)                                      --------->ARR14(2)                                --------->At4g35610    ------>MYB83                                <---------ZAT2  --------->ANAC58                                <---------GLK1(1)    --------->AtMYB61                      <--------                          --------->ALFIN1  --------->HSFB2a(2)                             <--------                    ------->GAMYB    <---------CCA1(2)--------->MYB52(1)                    ---------          ====================================HOX2a_HOX2a        <---------ANAC58           ---------          ------>ZmHOX2a(1)     --------->ZAT2---------->DOF2    <---------ANAC58--------->ANAC58          =====================================HOX2a_HOX2a       <---------ANAC46--------->ANAC58 --------->ALFIN1 >>>>>>>>>MYB98<---------At4g35610  --------->DEAR3(1)         ------->GAMYB ----->DOF2      --------->MYB52(1) ----------->ARR10--------->TOE1(2)   <----------DOF2   --------->GLK1(2)   aaggtgttgttcctcagcctaacggaagatggggagctcagatctacgagaagcaccaacgagtatggctcgggactttcaacgagcaagaagaagctgc  25884400                                           <---------ATERF1(1)                                         --------->RAP2.3(1)                                         <------NtERF2                                        ------>NtERF2                                        <---------ATERF1(1)                                       <---------DEAR3(1)                                       --------->DEAR3(1)                                      --------->ATERF1(1)                                     <---------ATERF1(1)                                     ------>NtERF2                                    <---------DEAR3(1)                                    ----------->HVH21                                   --------->ATERF1(1)                                   <------NtERF2                             --------->LBD16                            <---------ANAC55(2)                 <---------ANAC46 <---------ATERF1(1)      --------->ANAC46      <---------ANAC46                     <---------HSFC1(1)      --------->ANAC58      <---------ANAC58 <---------ETT(2)    --------->HSFC1(1)      ----------->HVH21     <---------ANAC58<------NtERF2        --------->HSFB2a(2)      --------->ANAC58      <---------ANAC55(1)             --------->HSFC1(2)     --------->SPL7         --------->ANAC55(2)             --------->HSFB2a(1)    ------>ZmHOX2a(1)    --------->GLK1(2) ------>NtERF2    <---------HSFB2a(1)   --------->TOE2(2)    <---------ARR14(2)--------->DEAR3(1)--------->KAN4(1)                      --   --------->TOE1(2)    <---------GLK1(2)--------->ATERF1(1)<---------KAN4(1)                   ----- -HSFC1(2)      --------->ZAT2    --------->RAP2.6(2)       <---------HSFC1(2)                  <---- -At4g35610     <---------At4g35610------>NtERF2<---------WRKY12 <---------HSFB2a(2)<----------DOF2-- >At4g35610     <---------ZAT2----------->HVH21--------->DOF5.7(2)      <---------DEAR3(1)    <------ >HSFC1(2)     <---------TOE1(2) <---------DEAR3(1)    --------->HSFB2a(2)<------NtERF2       -------   tcgttcctacgacatcgcagcttgtagattccgtggccgcgacgccgtcgtcaacttcaagaacgttctggaagacggcgatttagcttttcttgaagct  25884500  Previous    Next  AGI:  At1g68840.1    Description:  RAV2 (REGULATOR OF THE ATPASE OF THE VACUOLAR MEMBRANE); DNA binding / transcription factor. Identical to Ethylene-responsive transcription factor RELATED TO APETALA2 8 (RAP2-8) [Arabidopsis Thaliana] (GB:P82280;GB:O23110;GB:Q8LDM7); similar to AP2 domain-containing transcription factor, putative [Arabidopsis thaliana] (TAIR:AT1G25560.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN68564.1); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340); contains InterPro domain DNA-binding, integrase-type; (InterPro:IPR016177); contains InterPro domain Pathogenesis-related transcriptional factor and ERF, DNA-binding; ( Range:  from: 25883990    to: 25885399    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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