Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                       <------MYB83                                                     <------MYB46(1)                                                    --------->MYB111(1)                                                    --------->MYB59                                                --------->DAG2                          --------->YAB1       ---------->DOF2                         <---------YAB1      --------->HSFB2a(2)                       <---------ICU4        <---------------AGL15                      --------->YAB1                       --------->YAB1        <---------HSFB2a(2)                    --------->MYB46(3)                      <---------ATHB12       --------------->AGL15          --------->ANAC58                 ------>ZmHOX2a(1)          ----------------->AGL3          --------->ANAC58                --------->TOE2(3)           <-----------------AGL3        ---------->DOF2    --------   acaaaacccaaaaacaatcctcaaatcatcataaaaatcaaacctttctaaaagtaggtcgaaacaatctctcaacaaaagcaagaacaaacatatcgaa  25878800                                         <-----------------------TaNAC69(2)                  --------->ALFIN1      --------->ZAT14              <-----------RAV1(2)       <---------ZAT14              ================RAV--------->ANAC58           <---------ALFIN1      --------->ANAC46                           <-------GAMYB           --------->REM1(1)    <-------TEIL                                --------->TOE1(3)         ----------->RAV1(1)   --------->ARR14(1)                =================HOX2a_HOX2a     <------ZmHOX2a(1)         --------->CCA1(2)                 <------ZmHOX2a(1)  ===================RAV      --------->ARR14(2)               --------->LBD16  ============================RAV--------->ANAC58             <-----------RAV1(2)  <-----------RAV1(2)         --------->ARR11(1) <---------At4g35610        --------->TOE2(3)  <---------LBD16 <-----------RAV1(1)---------->DOF2          <---------LBD16                    ---- --------->TOE1(2)<---------REM1(1)---------->DOF2  ---------->DOF2        ----------->GT1<---------GLK1(1) --->GT1 =================RAV <---------ARR14(2) --------->At4g35610       ------>ZmHOX2a(2)---------   aaacccaggagcaacaccaggtgttgcccatagatacgaaagagcagtgagagctaaagctactccaggagcagtgatcgttaaaccattagatttcggc  25878900                                   <---------------AGL15                                --------->MYB52(1)                                ------------------>SPL14                                <---------ARR14(2)                          --------->ANAC46                          --------->ANAC58                          --------->ANAC58                        <---------ALFIN1                       <---------ZAT18                       <---------ZAT14                       --------->ZAT14                      <---------ALFIN1                                                  <------ZmHOX2a(2)                     --------->ANAC46 <-------TEIL                                    --------->WOX13(1)                   <-----------GT1 ------->GAMYB                                   <---------ARR11(1) ------>DOF2    <---------CCA1(2) --------------->AtSPL3                      ------->TEIL          - >RAP2.6(3)   --------->YAB1    --------->ARR14(2)            --------->At4g35610  --------->ARR14(2)   aaagtacttcgatatatcatatcaccacactccataaccgtacatggaagtccaactccaactccgatgaagagattgtgaaccgtatcgatcaattgag  25879000                           <<<<<<<<<<MYB80                          <---------MYB46(3)                          <------MYB83                          <------MYB46(1)                                                       -----                         <---------AtMYB61                                              --------->ALFIN1                        <---------MYB52(1)                                             <-----------HVH21                 <----------DOF2                                                   --------->MYB52(1)               --------->At4g35610                                             ------>NtERF2    <----               <---------At4g35610                                             --------->LBD16 <----- ---------->RAV1(1)--------->MYB52(1)    --------->GLK1(2)                    --------->LBD16  ------   cgcgacaactggaattgagcttaaccgttggtttaaaactcaaaatcggtgaagttagagagaaaggtttgagttttttgccgagaaacggtgagggagt  25879100                        <---------REM1(1)                    <---------ARR14(2)                    <---------ARR11(3)                    --------->ARR11(3)                  ----------->ARR10                --------->LBD16               --------->HSFB2a(2)               --------->LBD16           <---------ALFIN1       <---------At4g35610                     <-----------GT1       --------->At4g35610                <---------AHL20(2)                                       <- ---->ARR14(2)<---------LBD16        <------NtERF2                                      ------>ZmHOX2a(1) -----ARR14(2)<---------HSFB2a(2)   --------->LBD16          <-----------RAV1(1)       --------->TOE2(3) ----GLK1(1)  --------->HSFB2a(2)  <---------ANAC46--------->LBD16                     --------->TOE1(3) --->GLK1(1)------>ZmHOX2a(1)     <---------LBD16<---------LBD16               --------->YAB1    <---   tccgatgtaagctcctcccggagatattgtagccatggcggaatttttttcaccggaagaattttgttggaagacaaaaaatcaaaattccttaaacagt  25879200                                                                               --------->O2                                                                               --------->ANAC58                                                                               --------->ANAC46 -----                                                                               --------->bZIP60(2)                                                                 --------->ZAT6<---------TGA1a  -----                                                                 --------->ANAC46              ------                                                      <---------ICU4           --------->TGA1a <-----                                                     --------->ICU4            <---------O2    ------             *TSS                                 --------->AHL20(2)       <------ZmHOX2a(1) --------           <---------ALFIN1                       --------->AHL20(1)   ==================bZIP_DOF<---        --------->ANAC46                          <---------AHL20(2)   ---------->DOF2 <---------AHL20(2) --------MYB52(1)                          --------->AtLEC2    <-----------GT1 --------->ANAC58<----- ------MYB46(3)                   <-----------GT1--------->AHL20(2)--------->ANAC46    --------->AHL20(2)   cgttgatttcgcaccactagtttttttttttttttttttctgttcattcaaattaattagtagatttacaccacaaaggacacgtcgattaaaatcagat  25879300        <---------TOE1(3)        <---------TOE2(3)    <---------ANAC55(2)  --------->GLK1(1) --------->ARR14(2)                                    --------->ICU4 <---------ARR14(2)                                   <---------ANAC58                        <------ ---->ARR14(1)                                        <---------ANAC58                       <------ZmHOX2a(2) ---->GLK1(2)                                -------->HAHB4                                 --------- --->ARR11(1)                                <---------ICU4                                 <-------- ----ARR14(2)                                --------->YAB1                                 --------- --->ARR14(2)                               --------->ICU4 <---------AHL20(2)               <-------- --->ARR10                                  <---------ATHB12                                --------- ----TEIL----------->GT1    <---------YAB1 <---------TOE2(3)<---------AHL20(2)        --------->YAB1 ----GLK1(2)      --------->MYB52(1)      --------->YAB1   --------->AHL20(2)        <---------ZAT6   tcggatatgtaaggtttaataaacgggcttatttttaggcccattaatgatgaagtgcttattaaatgggcttctcatgttgttttagtgataagatcca  25879400                      --------->YAB1                     <---------ATHB12 -TEIL               <------ZmHOX2a(2) >ARR11(3)       --------->MYB46(3)                     <-----------GT1 -ARR11(3)     ------>NtERF2                           --------->ATHB51                         ----- >AGP1        <---------ALFIN1                      --------->WOX13(1)                  --------->TOE2(3) -ARR14(2)    --------->DEAR3(1)                  <---------ATHB12 <---------At4g35610  --------->TOE1(3) >ARR14(2) --------->ANAC46             ---------->DOF2--------->YAB1                   --------->YAB1   taaatctaattcttcgccacccgatcataaactctggtttagaaaagtccccatcaattatcgatttgaagctaagtaagactcggctaatcttaagttt  25879500                                          --------->TOE2(3)                                <---------AHL20(2)                                         <---------ANAC55(2)                          <---------ARR11(3)                                         --------->ANAC55(2)                     --------->AHL20(1)                                         --------->ANAC46                   <---------AHL20(2)                                       <-----------GT1          --------->ARR11(3)    --------->ARR11(3)  <---------AHL20(2)        ------>ZmHOX2a(1)                   <---------ARR11(3)   --------->YAB1  --------->AHL20(2)       --------->TOE2(3)                   <---------GLK1(2)--------->AHL20(2) ---->AHL20(2)  <----------DOF2     ------->TEIL   <---------ANAC46         --------->AHL20(2)   aaatttaaatttgtttttctttcagtcttcctaaaatgtatttacgtcaattgatgtgtatcacaaaatctcacatttttaaatatatgatattatatgg  25879600                                                                        <---------AHL20(2)                                                                       --------->YAB1                                                                       --------->AHL20(2)                                                               --------->SPL7                                                               >>>>>>>>>SPL7                                                               >>>>>>>>>SPL4                                                             --------->LBD16                                                            <---------ANAC46                                                            <---------ANAC58                                                            <---------ANAC58                   --------->YAB1                          --------------->AtSPL8              --------->AHL20(2)                           --------------->AtSPL3       --------->ANAC58            <---------ANAC58      --------->ARR14(2)       --------->ATHB12       --------->ANAC58            <---------ANAC58      <---------ARR14(2)----------->HVH21 --------     ---------->DOF2            <----------DOF2    <-----------GT1    <---------YAB1        <--------   tataccattaagccattgaaataatagaaatcaactttcttgatgaagtgttttgaccatttccgtacaactattatatgacaacgatttggcaaatttg  25879700  Previous    Next  AGI:  At1g68830.1    Description:  STN7 (STT7 HOMOLOG STN7); kinase/ protein kinase. Identical to Serine/threonine-protein kinase SNT7, chloroplast precursor (SNT7) [Arabidopsis Thaliana] (GB:Q9S713); similar to STN8 (state transition 8), kinase [Arabidopsis thaliana] (TAIR:AT5G01920.1); similar to hypothetical protein OsJ_018655 [Oryza sativa (japonica cultivar-group)] (GB:EAZ35172.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42091.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN65372.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains I Range:  from: 25876108    to: 25879213    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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