Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         ---------->ID1                                 <---------AHL20(2)                         --------->ARR11(3)                             --------->YAB1                               <---------YAB1<------------MYB.PH3(1)       <---------DAG2        <---------ICU4                             --------->AHL20(2)       <----------DOF2       <--------HAHB4                         --------->AHL20(2) <---------At5g28300  --------->DOF5.7(2)       <---------ATHB12       ----------->GT1  <---------AHL20(2)<-----------GT1 -------DOF5.7(2)         <-----------GT1<----------DOF2     <---------CCA1(2)       <-----------GT1- ->AtSPL3                <---------AHL20(2)   --------->AHL20(2)----------->GT1 <---------MYB52(1)  - ->AtSPL8           <---------AHL20(2)<-----------GT1     <-------TEIL  <---------AHL20(2)     ------   tatcgtttactttttttgatattttttttaatcatttttttttctttttaaaatagtaaattcatatcgtttaattaatatcgttttttaaccgttttaa  25807700                                                                  ------>ZmHOX2a(2)                                                                 --------->CCA1(2)                                                                 <------ZmHOX2a(2)                                                                --------->ARR11(3)                                                                --------->ARR14(2)                                                                <---------ARR11(3)                                                                <---------ARR14(2)        <---------TOE1(3)                                                                --------->AGP1            <---------TOE2(3)                                                            ---------->DOF2              <---------At5g28300          <---------ZAT6                             --------->AHL20(2)                 <-----------GT1 -------->YAB1                                       <---------AHL20(1)      <---------AHL20(2) ---------->GT1       <---------YAB1          <-------TEIL<---------AHL20(2) --------->AHL20(2) --->AHL20(2)  --------->CCA1(2)     ----------->GT1 <---------AHL20(2)     --------->AHL20(2)   aatagtaatttagtgagaaatgagattataggtttggaacagagaaaattcatattttattttaaagatctacaaaaattttattcgattttacggtttt  25807800                                                                                      ------>MYB83                                                                                      ------>MYB46(1)                                             <------MYB46(1)                        <---------MYB59                                             <------MYB83               <---------AHL20(2)      <-----------------AGL1                --------->MYB59             --------->AHL20(1)    -------  --------->ARR11(3)              <---------ANAC46              ----------->GT1  <-----------GT1  <---------ARR11(3)              <---------ANAC58           ---------->DOF2----------->GT1   ------- <------MYB83                     <---------ANAC58      -------->ATHB1  --------->AHL20(2)    ------- <------MYB46(1)     ----------->GT1----------->GT1    --------->ICU4  --------->AHL20(2) <----------   tgtaggtcttcgattttggaaaacagaaaatttgtttcttgtaaatttggttatagaattattcaaaggaaaaaaaaattgtataaccaaatttacaaga  25807900                                                                                             <-------                                                                                             --------                                                                                         <---------WRKY38(1)                                                                                         <---------WRKY12 -->ANAC58         --------->YAB1                    <---------ARR11(3)       <---------HSFB2a(2) -->ANAC46     <---------------AGL15                 --------->ARR11(3)--------->TOE2(3)--------->WRKY18(1) -->ANAC58     --------------->AGL15              <---------ALFIN1     --------->YAB1  <-----------HVH21 -GT1<-----------GT1                              ----------->RAV1(1) <---------ATHB12 <--------ZAP1<   aacaaattttctgttttccaaacatagctaaacgagtttatctgaagaagcccaacatcttatacaggcccaatcttaatctcgaactcggtcaaatcaa  25808000                                                                                  --------->AHL20(2)                                                                             ------------>CBF                                                                            --------->ANAC58                                                                            --------->ANAC46            --------->YAB1                                                  --------->ANAC58       ------------>CBF                                                    ------->GAMYB            -     ------>MYB46(1)                                                      <---------ALFIN1          -     ------>MYB83      ----------->GT1                       ------>ZmHOX2a(1)   *TSS              -- --ATHB12  <---------ATHB12       --------->ANAC46  ---------->ID1      ----------->RAV1(1) <-------- ---->CBF--------->WOX13(1)     <-----------GT1 <---------ANAC58    --------->ARR14(2)      --------- -----------GT1   ----------->HVH21             <---------ANAC58    <---------ARR14(2)   <-------TEIL   ttttaccaactcaatcaaaccggaccggtttattttacgactcgctcttgtcttgtcttcttcctctgcaaatccaacacacaatttcatattcatctcc  25808100                         --------->YAB1                         <---------ICU4                         <--------ATHB1 -------->TOE2(3)       <---------ATHB51                                         --------->ANAC58 -------->YAB1          --------->ICU4                                           --------------->AtSPL8 --------->GT1    <------ZmHOX2a(2)                                              --------->ANAC58 -At4g35610      <---------ARR11(3)                                   <---------YAB1 >At4g35610      --------->ARR11(3)<---------MYB52(1)        <---------GLK1(2)   <---------------AtSPL3   aatgttaaatctcatcgaagatcacaataatggttcccttcgtttcaaaatgaaatttcaatagattcttctatgtttgaaacaaggtacctcttctaat  25808200                                                                                                   <-                                                                                              -------                                                                                            ---------                                                                                           ------>ZmHOX2a(2)                                                                                          <------ZmHOX2a(2)                                                                                          --------->At4g35610                                                                                          --------->CCA1(2)                                                                                         --------->ARR14(2)                                                                                         --------->AGP1                                                                                         <---------AGP1                                                                                         <---------ARR14(2)                                                                                         --------->ARR11(3)                                          <---------ARR14(2)                            <---------GLK1(1)                                          --------->ARR14(2)              <----------DOF2<---------ARR11(3)                   <-------TEIL   --------------------->WRI1          <---------ZAT18   --------->GLK1(1)   tcaacaaaaatgttcaatacatacacaaactcacttcaatggccgattcgaagtagaaatcaacaagattactgctctttgctccctgagagatctgaaa  25808300                               <---------ARR11(3)                            <---------HSFB2a(2)                     <---------MYB46(3)                      --------->ARR11(3)    --------->MYB52(2)    <-------GAMYB                    <-------TEIL   <-----------GT1         <---------MYB46(3) ----------GT1    <---------ARR14(2)      <---------MYB52(1)     <-----------RAV1(1)         -------- --->DOF2         --------->ARR14(2)<---------At5g28300    <-----------RAV1(1)           <<<<<<<<<TBF1 -->HVH21  ---------->DOF2  --------->HSFB2a(2)      --------->WRKY18(1)      --------->ANAC46   gttacaaactttcaaaagcatatacatcttcgagatgttactgtgttagttctcgctcaagctgttgctgttgttgttcaacaccatcttcttcttcatt  25808400                                                                                                    <                                                                                                   --                                   <----------DOF2                                              <----                                   --------------->AGL15                                        -----                        --------->LBD16     <--------P                                     <---------ANAC55(1)                       <---------LBD16     <-------GAMYB                                   <---------ANAC58               --------->YAB1      <---------DAG2                     <---------ANAC58     <---------ANAC58              ----------->GT1      <---------------AGL15          <---------At4g35610      <---------ANAC46        <---------TOE1(3)  <---------ARR14(2)                   --------->ATHB12---------->DOF2<-----        <---------TOE2(3)  --------->ARR14(2)      <-----------ARR10  <---------ANAC58    --------->MYB52(2) ->ATHB12 --------->ARR11(3)<---------GLK1(1)      --------->GLK1(2)<---------ZAT18   ----------->GT1   tgttaagcctaaggtattgataaaccctggatttgtgctttatggggttagacaatctacgcttattcagtggccttcgtttcaaaggaggttacttgtg  25808500                                                                                                   <-                                                                                                  ---  <---------ANAC46                                                                       --------->ARR14(2) ---------MYB46(3)          --------->KAN4(2)                              <---------AtMYB61   <----- ------->ALFIN1        ----------->GT1                                 <---------At4g35610   -------- -----MYB46(3)    <---------MYB46(3)                                  <---------TOE1(3)  --------->GLK1(2) ---->MYB55(2)  <---------ANAC58      <---------YAB1<----------ID1<----------DOF2        <---------ARR14(2) ----ANAC46     <---------ANAC58<---------YAB1      ----------->GT1   <---------TOE2(3) <---------GLK1(2)   ggtggagggagacttatgggttgtgaggtttattcttcttgtgatggtataagaaggaaaaatcggagctttaagcttaggtgtttggaagaatctgatg  25808600  Previous    Next  AGI:  At1g68720.1    Description:  cytidine/deoxycytidylate deaminase family protein. Identical to Uncharacterized protein At1g68720 [Arabidopsis Thaliana] (GB:Q9S7I0;GB:Q8GY37); similar to cytidine/deoxycytidylate deaminase family protein [Arabidopsis thaliana] (TAIR:AT5G28050.1); similar to hypothetical protein OsI_022231 [Oryza sativa (indica cultivar-group)] (GB:EAZ00999.1); contains InterPro domain CMP/dCMP deaminase, zinc-binding; (InterPro:IPR002125); contains InterPro domain Cytidine deaminase-like; (InterPro:IPR016193) Range:  from: 25808081    to: 25812645    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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