Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        --------->AHL20(1)            <---------At4g35610                                  <---------AHL20(2)      --------->AHL20(2)     <---------AHL20(2)                                          --------->AHL20(2)      <---------AHL20(2)    --------->AHL20(2)                                          <---------AHL20(1)      <---------AHL20(1) <---------AHL20(2)                                             <---------AHL20(2)   <---------GLK1(2)     --------->AHL20(1)                                             --------->AHL20(2) -->AHL20(2)   --------->ANAC58 <---------REM1(1)                                  --------->At5g28300 ---AHL20(2)   --------->ANAC58<---------TOE2(3)          <-----------GT1         ----------->GT1 >AGL15<---------AHL20(2)--------->AHL20(2)        --------->ARR11(3)       <---------------AtSPL8<-- ->AGL3--------->ATHB12 --------->AHL20(2)         <---------ARR11(3)     <---------ATHB12        ---   atacagaatttattgacatgctagaaaaaaattaatgtagccgatttcatcaacatcttataactccatctttgaaatcatgtacagtaaattattttca  25791900                                                                                               ------                                                                                              <------                                                                                              -------                                                                                              -------                                                                                        --------->TOE2(3)                                                                                        <---------MYB59                                                                                     ------>MYB83                                                                                   --------->AtMYB61                                                                                   <---------MYB59                                                                                <-----------GT1<-----                                                                      <----------DOF2------>MYB46(1) -------ARR14(2)                       --------->AHL20(2) <-----------GT1 <----------DOF2     <------ ------>ARR14(2)         ----------->GT1             ----------->GT1<---------At4g35610 --------->TOE1(3)   tatacgactactacatgaactacatagtagtaaaaaaaaaaaaaaatgaactacatagtaaaaccatttgagctttctttataaaccaaacctaaattta  25792000                                                              <---------ALFIN1                                                         --------->ANAC58                                                      <---------AHL20(2)                                           <-----------GT1  ----------->RAV1(1)                                     <---------AHL20(1)  --------->ANAC46 --->AHL20(2)                        <---------AHL20(2)  --------->ANAC58 ---AHL20(1)                         --------->AHL20(2)---------->DOF2 -->AHL20(2)                        --------->AHL20(2)--------->AHL20(2)            --------->AtLEC2 -->AHL20(1)                    <---------ZAT18      <---------YAB1      --------->YAB1 ----AHL20(2) --------->YAB1    --------->ZAT18    <---------ICU4      <---------AHL20(2)      <----- ---AHL20(2) <---------ATHB12<---------ANAC46     --------->ICU4       --------->AHL20(2)      <-----   attctcaatattcaaatcatcaaacgacgttttgtgcattaaatttttcgacataattaaagcaacacggtgttttaataaactcaatgcaaaatccagc  25792100                                                               >>>>>>>>>CBP60g                                                         --------->At5g28300                            <---------ANAC46            ----------->GT1                          <---            ----------->RAV1(1) <---------YAB1        --------->SPL7                             ----       --------->AHL20(2)   <---------ANAC58         --------->MYB52(1)                       <------     --------->TOE2(3)  <----------DOF2            <---------ANAC58                           -------   <---------YAB1<---------ARR14(2)                <---------ANAC58                           <------ ----ZAT2  <----------ID1   <---------ANAC58  ---------->DOF2  >>>>>>>>>SARD1                <-------GAMYB ----At4g35610   --------->ARR14(2)  ---------->DOF2<---------SPL7  ---------->DOF2        --------->MYB59   taattttcattaaacaacaaatactcctttgcttatgacaaaagcgcgtaaaggcttacggtgaaatttggaaagtagctaatttgacttaattcggtta  25792200                     ------>ZmHOX2a(1)             <---------AHL20(2)             --------->AHL20(1)             --------->AHL20(2)         <---------AHL20(2)                                         <---------TOE1(3)        <---------AHL20(2)                                 <-------GAMYB        --------->AHL20(1)                              <---------At5g28300        --------->AHL20(2)                             <---------WRKY18(1)        <---------AHL20(1)                            --------->WRKY12       --------->AHL20(2)           --------->AHL20(2)--------->WRKY38(1) ------HSFB2a(2)    --------->TOE2(3)       ------------>CBF<---------MYB52(1) ----->HSFB2a(2)    --------->TOE1(3) ---------->DOF2 --------->WRKY45 ---ARR14(2) <---------AHL20(1)     --------->YAB1  <----------DOF2 <---------TOE2(3) -->ARR14(2)--------->AHL20(2)      <---------AHL20(2)----------->HVH21*TSS ---MYB52(1)<---------AHL20(2) ------------>CBF  <---------ARR11(3)<-----------GT1              <----   tggaaacaaattaattttatttccttaaaaacaaacaattaaaagtttcaatttctttgaccgttgatttaacgtagcattgaagcattttctcagagag  25792300                                                                       <-------TEIL                                        --------->ANAC58             --------->ARR11(1)                                        --------->ANAC58             --------->ARR14(2)                                       <---------LBD16          <-----------GT1                                     <---------ZAT2            <---------YAB1                                     --------->ZAT2          --------->ATHB51                                <-----------GT1              <--------HAHB4                           <---------AHL20(2)                <---------ICU4                           --------->AHL20(1)               --------->ICU4                           <---------AHL20(1)             --------->YAB1                            -          ------>NtERF2    --------->AHL20(2)            <-------TEIL<---------GLK1(2)          -----       --------->At4g35610<---------AHL20(2)         <---------YAB1  <---------ARR14(2)    <--------- -----ZAT14               --------->AHL20(2) ----------->GT1<---------YAB1  --------->HSFC1(2)  -----   tagagaagacgctgcgaaactcagaaaattaaattttcaagctcggaaggaaactctgattcattattacagattcgaagtttcagagaagaagggacaa  25792400                                                                                             ------>ZmHOX2a(2)                                                                                            <------ZmHOX2a(2)                                                                                           <---------                                                                                           --------->ARR11(3)                                                                                           <---------ARR14(2)                                                                                           <---------AGP1                                                                                           --------->ARR14(2)                                                                                    ------>ZmHOX2a(2)                                                                                  --------->ARR11(3)                                                                                  <---------ARR11(3)                                                                              --------->YAB1--------- --------->DOF2              <-----------GT1                        --------->ARR11(3)     --------->AGP1 ---->ANAC58    <---------ANAC58                                    <---------ARR11(3)     <---------ARR11(3) -ID1  <-----------GT1 <---------ANAC46                         ------->GAMYB<---------MYB52(1) <---- ---->ANAC58    <---------ANAC58                             --------->MYB52(1) <---------YAB1  <----   gacaaagtttaactgcttacttgttgtgtttttgctctctggtcttcaattgctgaagttttataacggagatgtttcagttatgatcttacagatctga  25792500        <---------ARR14(2)        --------->ARR14(2)       <---------CCA1(2)       --------->GLK1(1)              --------->HSFB2a(2)                                 ------>ZmHOX2a(2)       <---------GLK1(1)              <---------HSFB2a(2)                                <------ZmHOX2a(2)     <---------ANAC58                ------>ZmHOX2a(2)    --------->ANAC58              <---------ARR14(2)     <---------ANAC58--------->MYB59--------->At4g35610   --------->ANAC58              --------->ARR14(2) --ARR10<-----------ARR10   --------->TOE2(3) <---------AtMYB61                        <---------RAP2.6(3) >CCA1(2)    --------->ANAC46      --------->ARR11(3)   ---------->DOF2             ------>NtERF2 -----TOE2(3)--------->ANAC58     <---------ZAT14    --------->ANAC58           <---------ANAC58 -----TOE1(3)--------->ANAC58     --------->ZAT14    --------->ANAC58           <---------ANAC58   ggttattgcatatccactcaaattgggtaatctcagtgatctggaattttggtggaagcaaagcaaaatttgtgttttttttgctcggccgatctgggtt  25792600                                              <---------YAB1                                        -                                            ----------->GT1                                         -                                            <---------ANAC46                               ----------                                          <---------ZAT14                                  <------MYB46(1)                                          --------->ZAT14                                  <------MYB83                                         --------->ALFIN1                        <---------ZAT18    -                                     --------->At4g35610                        <---------ZAT6 ------ ------>ZmHOX2a(2)    <----------DOF2<---------At4g35610                      <---------ANAC46-------   tgatctattacatcgtcttctctgctttgtcttgaaattagctgtgttgtgatttcgaaagtttgctacttcttcacgtttagtgttcttagttggtaaa  25792700                                                                                                    <                                                                                             <------- <------MYB83<---------ARR14(2)                                            --------->YAB1    <------- <------MYB46(1)                                                    --------->ATHB12         <------- -------->MYB46(2)                                               <------MYB46(1)            --------- -------->MYB111(1) --------->YAB1                               <------MYB83             <---------MYB52(1) ->GT1<----------DOF2      ---------->DOF2             <---------WOX13(1) <---------YAB1 <-------GAMYB -------->MYB59   <-----------HVH21                  --------->ATHB12 <---------WOX13(1)============= --->DAG2    --------->ARR14(2)                     <---------YAB1  <---------MYB46(3)  ------>ZmHOX2a(2) --->DOF2   <------ZmHOX2a(1)          <----------DOF2>>>>>>>>>ARR2<---------YAB1   ----------->HVH21   gtttggtactttcaggatactgtcatactcaaagtctgggacttttaggtgtttttgattgttcatttggtgattgatcatcgtctctgatcgttacttg  25792800  Previous    Next  AGI:  At1g68690.1    Description:  pseudogene, protein kinase family, similar to protein kinase 1 GB:BAA94509 GI:7573596 from (Populus nigra); blastp match of 71% identity and 2.4e-104 P-value to GP|13486635|dbj|BAB39873.1||AP002882 putative protein kinase {Oryza sativa (japonica cultivar-group)} Range:  from: 25792271    to: 25795985    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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