Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   <---------ICU4                <---------YAB1               <-----------GT1              --------->YAB1                                                               <---------ICU4          --------->ATHB12                                                                 <---------AHL20(2)          <---------ICU4                                                                  <---------YAB1          <--------HAHB4                                                                <---------ICU4         --------->ICU4                                                                --------->AHL20(2)         <---------YAB1                                                                --------->ICU4      <---------YAB1                                                            --------->GLK1(2)     --------->AHL20(2)                                                        <---------GLK1(2)    --------->YAB1            <----------DOF2                          <---------ANAC58<---------AHL20(2) ->YAB1--------->YAB1         <---------DAG2                           <---------ANAC58<---------ATHB51   tttccattataatcatttatcattccattctgcttttttttttgggttctcaattctgccattccaccatgtttcttatcggaatctaaataattaatgc  25788800                                                                                ----------->GT1                                                                             <------MYB46(1)                                  ------>MYB83                               <------MYB83                      --------->AHL20(2)                                     <---------ANAC46                      <---------AHL20(2)                                    --------->MYB55(2)                     <---------AHL20(2)                                     <---------AtMYB61                     --------->AHL20(2)                                     --------->MYB111(2)   ===                     --------->AHL20(1)                                     --------->MYB46(2)    <--                     <---------AHL20(1)  <---------YAB1                     <---------MYB46(3)    ---                 --------->AHL20(2)<---------ATHB12                         --------->MYB111(1)   <--                 <---------AHL20(2)--------->MYB46(3)                  <---------TOE1(3) ============              ----------->GT1     ------>MYB46(1)  --------->TOE2(3)   <---------TOE2(3) ---------->DOF2             <---------YAB1       -------->P  <-------GAMYB     <---------AHL20(2)   ---------->DOF2             ----------->GT1 <-----------GT1 <---------MYB46(3)--------->AHL20(2)    ================   attaagtagttgaagatgataaatttatttgtttccaaccattttgatggttaacttaaaaaacataaaattttaggtttggtggaaaaaagaaagggac  25788900                                                              <---------------AGL15                                                              --------------->AGL15                                                         ------->TEIL                                                         <---------ARR11(1)                                                        <---------CCA1(2)                                                        <---------GLK1(2)                                                   --------->KAN4(2)                                                  <---------GLK1(1)                                                  <----------TaMYB80        <----------ID1                            --------->GLK1(1)       --------->SPL7                             <---------KAN4(1)     <---------SPL7                               --------->KAN4(1) ======================bZIP_DOF                  <---------ARR11(3) -------O2                                       --------->ARR11(3) ------>O2  ---------->DOF2 ----------->GT1      --------->ARR14(2) -------TGA1a             --------->ANAC55(2)    <---------ARR14(2)        --------->TOE2(3) =======bZIP_DOF      <-----------HVH21         <------ZmHOX2a(1)       <---------GLK1(1)       <---- =======bZIP_DOF     ----------->GT1         <---------LBD16 <-----------------AGL3     <---------ZAT18   acttggccttacgacaaagcgaagggtcacatgttaatacaacaatttcaggatattcgaatctctaatattggaatccctaatacatggctcactctct  25789000                                                                     ----------->GT1                                                          <---------AHL20(2)                                                      <---------RVE1(1)                                                     <---------GLK1(2)                            <---------AHL20(2)       <---------ARR11(3)                           --------->AHL20(2)        --------->ARR11(3)                      ------->GAMYB               --------->ZAT14              --------->At4g35610     <--------P              ---------               --------->ZAT18              <---------At4g35610<---------LBD16            --------->MYB52(1)               <---------ZAT14         ----------->HVH21 <---------YAB1                ------>ZmHOX2a(1)       --------->YAB1   --------->AHL20(2)  ----------->GT1   <-----------GT1          ============== ------DOF2    <---------ZAT18  <---------ICU4   ---------->DOF2<---------ANAC46       ==============   ttgattcaaacataaactgcactcgtttatttaatctttgtttgacagctaaaaagatttttattttcgggttgataaacctataactcctccaacggac  25789100                          <---------ANAC46                          <---------ANAC58                          <---------ANAC58               ------>ZmHOX2a(2)              <------ZmHOX2a(2)             <---------AGP1  <---------ZAT18             --------->ARR11(3)             --------->AGP1  --------->ZAT18   <-----------GT1    <----------DOF2                 <----------DOF2 ----------->GT1  --------->AHL20(2)  <---------DAG2           <---------O2 ------>NtERF2                  --------->ANAC58 >MYB46(3)   <---------ARR11(3)                <---------ANAC46      *TSS  ---------->DOF2 --------->ANAC58 ====================HOX2a_HOX2a        <-----------GT1  --------->HSFB2a(2)   --------->ALFIN1 =====================HOX2a_HOX2a  ----------->TBP<---------ZAT18    ----------->GT1   >>>>>>>>>MYB2-   aaaatttactagatagatctataacttttcgtgggctatatataacttctcgtgggcttcgaggcccaaaaatgtttaaaagtgttgaaaaccaagacaa  25789200                                                                                              <------                                                                                            ---------                                                                                            <------NtERF2                                                                                          --------->bZIP60(1)                                                                                          <---------bZIP60(1)                                                                               --------->ARR14(2)                                                                 <---------GLK1(1)        <---------ANAC58                     <---------GLK1(1)                           <------ZmHOX2a(2)        <---------ANAC58             ---------->DOF2                                     --------->GLK1(1)        <---------ANAC46       <---------ANAC46                                         <---------AGP1 <---------ARR14(2) ---       <---------ANAC58                                         --------->ARR11(3)  <---------MYB52(1)       ----------->GT1                                          <---------ARR11(3) <-----------HVH21       <---------ANAC58                                        --------->RVE1(1)  --------->ANAC46---      <-----------------------TaNAC69(2)                    ---------->DOF2    --------->GLK1(2)----- -------->AHL20(2)   --------->GLK1(1)             ----------->GT1------>ZmHOX2a(2)<-----------TGA1   aaaaaaatggagtgaaaaagatgaaatccctaaattgaatcgcaaatcgcaatttgaaaaaaaaaagatctctctctgaagaatccgtcatggcgtcgtc  25789300                                                                             <-------PIF5                                                                             ------->PIF5                                                                            --------->ZAT2                                        <---------GLK1(1)                   <---------ZAT2                                        --------->GLK1(1)                   --------->At4g35610                                        <---------ZAT2                      <---------At4g35610      ------>ZmHOX2a(1)                 --------->At4g35610                 ----------->RAV1(2)   <------ZmHOX2a(2)                    --------->ZAT2                      XXXXXXXXXXXXXXXXXXXXXXX>MIR836   ===============================HOX2a_HOX2a           --------------->AtSPL8 -----HVH21                             <---------At4g35610<-----------GT1 ------->TEIL<----------DOF2 >ATERF1(1)                       ---------->DOF2     --------->TOE2(3)   <------------OsbHLH66 ------>ANAC58                 >>>>>>>>>TBF1       <---------GLK1(2)    --------->ANAC58 ------>ANAC58             ===========================HOX2a_HOX2a       --------->ANAC46         <--- ----->DOF2                <------ZmHOX2a(1)   <------ZmHOX2a(2)        --------->ANAC58        <----   aagcgatccttcaaaaccagtaatggagaggaagaagaaaggagctccgatcaaattcttagtacctctcatctacgcacctgcgcttcctttgattcgg  25789400                                                           <----------DOF2                                                          <---------ANAC58                                                          <---------ANAC58                      -----                                                         --------->ABI4(2)           <---------ARR14(2)                                                      <---------DEAR3(2)             ------->TEIL <--             --------->ANAC46   <---------CCA1(2)    <---------DEAR3(1)              --------->ARR14(2)             --------->ANAC58 ==========================HOX2a_HOX2a                 <---------CCA1(2)      <---------TOE1(3)       ------>ZmHOX2a(2)      <---------At1g77200      <XXXXXXXXXXXXXXXXXXXXMIR835-3P      <---------TOE2(3)      ===========================HOX2a_HOX2a    <---------ANAC46         <----  <----------DOF2           <---------ARR11(3)       <---------DREB2C(2)   <---------CCA1(2)   <----- ------MYB52(1)             --------->ARR11(3)     <-----------HVH21   <---------ANAC58    <--------- ---GAMYB    --------->ANAC58<------ZmHOX2a(2)   ------>ZmHOX2a(1)     <---------ANAC58  ------>ZmHOX2a(1)   ttgtctttaaggcataagccagttctaagagatcgtctcttcggtcttgtcctcgtcggtgcttttgctcatggcttctatcttgtgtatcctctttatg  25789500         <---------ANAC58     <---------ANAC58     <---------ANAC58    <---------AtMYB61  <----------DOF2                                                                         --------->ATHB12 <---------ANAC58                                                                    <---------AHL20(2) <---------ANAC58                                                        <----------DOF2 <---------YAB1 ---->ATHB12                                                     --------->ATHB12    --------->AHL20(1) -------WOX13(1) --------->ANAC55(2)                           ------->TEIL         --------->AHL20(2) -----ICU4<----------DOF2                                <---------KAN4(2)          --------->ATHB51 ----YAB1<---------ANAC58  <---------ZAT6                ---------->TaMYB80         <---------AHL20(2) -DOF2---------->ID1     ----------->GT1  --------->ANAC55(2) <---------AtLEC2     --------->ICU4   attgctttggtgctttcttatgtgatttagtgaaacttgcatttatgtattgtatatggaatatgcatgtttgggttttaggggaattattttgatttgc  25789600                                                                                     <---------TOE2(3)                                                                        <---------ANAC58     --------->CCA1(2)                                                  <---------ANAC46    <---------ARR14(2)                                 <---------ARR14(2)          ---------->DOF2    --------->ARR11(3)                                 --------->ARR14(2)      <---------ZAT6    <---------ARR11(3)                            <------ZmHOX2a(1)     <---------ANAC58            -    --------->ARR14(2)                       <---------ZAT2            <---------LBD16    <---------ANAC46  ----------->ARR10               <---------------AtSPL8      <-------GAMYB    ----------->GT1    <--   agtgaagatttgtgttttgatattgtagattgttagtatgtacagagagctaggaagtatttgctgttgaaattgcgcatagagttaaaggtatgtgtaa  25789700  Previous    Next  AGI:  At1g68680.1    Description:  similar to unknown [Populus trichocarpa] (GB:ABK93653.1) Range:  from: 25789169    to: 25790587    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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