Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                 <---------DAG2                                                         --------------->AtSPL8                                                         --------------->AtSPL3                                                         <---------------AtSPL8                                                         <---------TOE2(3)                        ---------->DOF2           ------->TEIL <----------DOF2                  --------->HSFB2a(2)          --------->ANAC55(2) ----------GT1    <---------HSFB2a(2)        <---------ANAC46<-------TEIL -->GT1     <---------YAB1           <-----------GT1 <----------DOF2                             ----   ataactgtttaactatgagtctagaagaaagctcgatataaactgtttcatgtaactttgaggtacttttttttttcatatgtgtttgtttggccaaaac  25779000                             --------->ANAC55(2)                             <---------ANAC55(2)                            <---------TOE2(2)                        <----------DOF2                            --------->MYB59                 --------->YAB1       <----------DOF2      <---------TOE2(3)              <---------ATHB12         <---------ANAC46    --------->ZAT6   <---------HSFC1(2)                  --------->WOX13(1)    ------>ZmHOX2a(1) ----  <-----------GT1    --------->HSFC1(2)     <-----------RAV1(1)--------->AHL20(2) <----------DOF2---- ------->GT1    <---------HSFB2a(2)  ------>ZmHOX2a(1)--------->TOE2(3)<-----------RAV1(1)       ----   agtttaacactttcaatactcgaagctacttaggtaatcctcttctatgtggccattgttaatcataaattctttgttgtcctgctttgtgtaacaaaac  25779100                          ------->TEIL                         ---------->ID1                     <----------DOF2               <---------MYB46(3)                                                           <--------               <------MYB83  <----------DOF2                                            <---------GLK1(1)             <--------P  <-----------GT1                                        <---------ANAC46 ----->TOE1(3) <------MYB46(1)                                               <---------ANAC58 ----->YAB1<-----------RAV1(1)                    <---------bZIP60(1)        <---------ANAC58     --- ----->TOE2(3) <---------DEAR3(2)  <----------DOF2--------->bZIP60(1)        <---------ANAC46     ---   cataacataactcatgttggttcctttgtacctttgtctttgaagaaatgtgatgtctcaactctcaaaaatacgaattgtgtggtatagaattcttctt  25779200                                                                             ---------->DOF2                                                                          <-----------HVH21   <------          <------MYB46(1)                                                ------->GAMYB   <---------ANAC46          <------MYB83                <---------AHL20(2)               <---------At4g35610 --------->LBD16    ---------->DOF2                   --------->AHL20(2)               --------->At4g35610<---------LBD16   <---------------AGL15             <---------YAB1                    <<<<<<<<<<<<WRKY18<---------ANAC58   ------>ZmHOX2a(1)               --------->YAB1<---------ZAT14     <---------WRKY38(1) <---------ANAC58 -YAB1   --------->MYB59          <---------ATHB51<---------ALFIN1   <---------WRKY12    ----------->RAV1(2) ------->ARF1                   --------->YAB1   --------->ZAT14  --------->ANAC58  <------MYB83  --- ------->ID1         ----------->RAV1(1)       --------->ANAC46   --------->ANAC58  <------MYB46(1)   gtctcctaaagttggtaatagagcaacaatggaacaataataaatgaacacaacactctctatgactcaagtcaactgtcaaagcttggttccctgggtc  25779300                                          ------>ZmHOX2a(2)                                         --------->CCA1(2)                                         <------ZmHOX2a(2)                                        <---------AGP1                                        <---------ARR11(3)                                        --------->AGP1                                        <-----------ARR10                                        --------->ARR11(3)                                <-------MYC3                                ------->MYC2                                <-------PIF5                                ------->PIF5                                <-------MYC4                                              ------>MYB46(1)                                ------->MYC3                                              ------>MYB83                                ------->MYC4                                            --------->MYB46(3)                                <-------MYC2                                            <---------MYB111(1)                               >>>>>>>>>>HY5                                            --------->AtMYB61                               <---------O2                                             <---------MYB111(2)                               --------->TGA1a                                          <---------MYB55(2)                      <---------GLK1(2) --------->ARR14(2)                              <---------MYB46(2)         <---------ARR11(3)    --------->O2            <-----------ARR10               --------->ANAC46         --------->ARR14(2)    <---------PIF3(3)       --------->GLK1(2)       <---------ALFIN1         --------->ARR11(3)    --------->ANAC46    --------->YAB1            <---------ALFIN1         --------->GLK1(2)     <---------TGA1a------------>CBF              <---------REM1(2)         <---------ARR14(3)    --------->PIF3(3)  <---------ATHB12   <-------MYC3      --------->ANAC58 ---PCF2 --------->ARR14(3)  <---------ALFIN1 --------->MYB46(3)     ------->MYC3      --------->ANAC58 --->ZmHOX2a(1)    --------->YAB1       <---------ARR14(2)     <-----------GT1--------->ZAT14   ctacataacaaaatcttcgaatcatattcttccacgtggcaagatctaaccaatgagaatctatttttccatatgctctccacactcccaccaaacaaat  25779400                                                                           <---------LBD16                                                                       <---------ZAT14                                                    --------->ARR14(2) --------->ZAT14                                                    <---------ARR14(2) <---------ZAT18                                                   <------NtERF2      ----------->HVH21                                                  --------->LBD16    --------->At5g28300                                       --------->ANAC46              --------->LBD16                                     --------->ANAC46               <---------ANAC46                                     --------->ANAC55(2)          --------->LBD16                   <                                     <---------ANAC55(2)          ------>NtERF2               <------                         <-----------GT1         --------->LBD16 <---------ALFIN1             <------             ----------->GT1         --------->ANAC58       ------>ZmHOX2a(2)   --------->ANAC58    <    *TSS   ---------->DOF2  <---------DAG2      <---------LBD16  --------->DEAR3(1)      <-----------HVH21    ------------------------>ANAC81  --------->ANAC58      <------ZmHOX2a(2)    --------->ANAC58   <-   cccaagaatcaacaaaagaaaaaacattcaccttctcttacgcgactctcgccggaaacagatcgctccgccgtgaactcggaagccatggggtcacttt  25779500      --------->TOE1(2)     --------->ANAC58     --------->ANAC55(2)     <---------ANAC55(2)     <---------ANAC46     <---------ANAC58     --------->ANAC58     <---------ANAC58    <-------TEIL  <---------ARR14(2)                                               --------->DEAR3(2) ---------------AtSPL3                                        <---------HSFB2a(2)            <------- ---DAG2                                                      --------->HSFB2a(2)            <------- ----DOF2    ------>ZmHOX2a(2)                             <----------DOF2               <----------DOF2 ---------TOE1(2)                                       <-----------GT1        --------->ATHB12 --------AtLEC2                                      ----------->GT1         <---------WOX13(1)    <-   tgcaggtacgtatgatccagttggaagtttaatctgttctctgaaaattcgaagtttgtaacttttggaaccgaagctaattgatgggtttctttagggt  25779600                                                              <----------DOF2                                                            <---------At4g35610                                                            --------->At4g35610                                                         --------->At4g35610   <---------ICU4                         ------>ZmHOX2a(1)               --------->ZAT2  --------->YAB1           --------->ANAC58         ----------->GT1      <---------ZAT2------->TEIL --TOE2(3) --------->ANAC46         <------MYB83         <---------At4g35610   --------->YAB1 --TOE1(3) --------->ANAC58   --------->LBD16           <-----------RAV1(1)   <---------ATHB12 ----------GT1      <----------DOF2 <------MYB46(1)   <---------At4g35610--------->TOE2(3)------>ZmHOX2a(1)   tttactaaatcactcgccatgactttcctctccgagattggtgacaaaacgttcttcgctgctgctgtaagtgaatcttaatcatcttcttcctcttcat  25779700                             <---------ANAC46                             <---------ANAC58                    <----------DOF2                         ---------->DOF2                    <---------------AGL15                --------->TOE1(3)                    --------------->AGL15         --------->TOE2(3)                --------->AHL20(2)                <---------ARR14(2)             --------->ARR14(2)              --------->ICU4                <---------ZAT14   ========================HOX2a_HOX2a          <---------YAB1                --------->ARR14(2)<------ZmHOX2a(2)  ---------->DOF2         --------->YAB1                --------->ZAT14  <---------ARR11(3)------>ZmHOX2a(1)        <-------TEIL         ---------->DOF2     <---------ANAC58  --------->ARR11(3)      ----------->RAV1(1)  ------->TEIL   ----------->GT1 <-----------------AGL3      <---------ARR14(2)<----------DOF2<---------ICU4     <-   atttggagttaaaaagagtatacttttaatggcgagatcaatattctaaaatcctcaaagcttaaagctttagcaacattcataattcaatatgaacgtt  25779800                                                                       <---------DAG2                                                                       <----------DOF2                                                                 <---------At4g35610                                                                 <-------GAMYB                      <                                                                 --------->At4g35610         <-------                   <---------ATHB12                <----------DOF2 --------->WRKY38(1)    <---------YAB1 ---------DOF2>>>>>>>>>>>>>>>>>LFY       ----------->GT1 ------>ZmHOX2a(2)        ---------->DOF2   -   tctttgttaattttggagccaatgtttctagttaatgctgaaatggttatgttctttgatccaactctgttgactttttgttactaaagcttcttattgt  25779900  Previous    Next  AGI:  At1g68650.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G25520.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42107.1); contains InterPro domain Protein of unknown function UPF0016; (InterPro:IPR001727) Range:  from: 25779404    to: 25781537    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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