Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                 --------->YAB1               --------->ATHB51               <---------ICU4               --------->AHL20(2)               <--------ATHB1              --------->ICU4              <---------ATHB51              <---------ATHB12                                                                <------            --------->YAB1                                        <---------AHL20(2)        ---------       <---------At4g35610                  ---------->DOF2   --------->AHL20(2)       <---------AHL20(2)       --------->At4g35610    <---------TOE2(3)        ----------->GT1          ----------->GT1    --    <---------At4g35610    <---------MYB52(2)   ----------->GT1  <---------AHL20(2)    --------->AHL20(2) >TOE2(3)  --------->REM1(1) --------->MYB52(1)--------->DAG2<---------YAB1    <---------TOE2(3) <---   tctttcttctgctacaataatttctaacaaataacgttgagaaaatcaaagagtgaattgtttattatttattgtttgattttggttatataaattgtta  25772300                                                         --------->HSFB2a(2)                                                         <---------HSFB2a(2)                                                         <---------ANAC46                                                         <---------ANAC55(2)                                                         --------->ANAC55(2)                                                     <---------DEAR3(2)                                                     <---------SPL7                                                 <---------bZIP60(2)                                                 <---------TGA1a                                                 =========================MYC_MYB                                                 <---------bZIP60(1)                                                 --------->TGA1a                                                 --------->bZIP60(1)            <---------At4g35610                                             --------->ATERF1(1)            --------->ARR14(2)                                           --------->ALFIN1               --------->LBD16                                           <---------ANAC46      -------->P <---------ARR14(2)                <---------LBD16           --------->ATERF1(1) <------ZmHOX2a(2) --------->At4g35610            <---------------AtSPL8        <------NtERF2  <---------LBD16 --------->ANAC58  --------->AHL20(2)                    <---------DEAR3(1)--------->LBD16--------->ANAC58  <---------AHL20(2)                    --------->ALFIN1<---------LBD16  --------->ANAC46 ---YAB1--------->At5g28300   <---------MYB52(1)--------->ATERF1(1)--------->AtMYB61  ------>ZmHOX2a(1) -->GT1----------->GT1      <---------DEAR3(1)  --------->SPL7===============================HOX2a_HOX2a ------->YAB1   ------->TEIL<---------MYB46(3)----------->HVH21 <-----------GT1 --------->ZAT2 ------YAB1 <---------------AtSPL3     <---------LBD16<---------ARR14(2)<---------LBD16   ttaataaaactgtaaatgtacgggaatgggccggtgtttaaggcggaggggacgtcgttccgggatcaaccatacgcggaacagcttcctcagggactat  25772400                                                        <---------CCA1(2)                                                       <---------ARR14(2)                                                       --------->ARR14(2)                                                       <---------ARR11(1)                                                       <-----------ARR10                                                       ------->TEIL                                                      <---------ARR14(1)                                                    <---------ANAC55(2)                                                    --------->ANAC55(2)                                             ------->TEIL                                           <---------SPL7                                          --------->ANAC55(2)                                          --------->ANAC58                                   <-------GAMYB                                          <---------ANAC58                                  ---------                                          <---------ANAC58                                  <--------                                         --------------->AtSPL3                 <----------DOF2         <----------DOF2                 --------------->AtSPL8              <---------ARR11(3) --------->AtMYB61       ----------->ARR10--------->ANAC58    <---------ANAC46 ------>ZmHOX2a(2) <---------ALFIN1 <-----------HVH21      ------->TEIL <---------CCA1(2)      --------->ARR11(3)   ggaccacagggctttgcgattgtcacgaagatgctcacatttgtacgtaccaaaacgtatctcttcgtgttttttgtttgatctttcttcttgtttgttg  25772500                                             <---------TOE2(3)                                             <---------TOE1(3)                                       <-------TEIL                                                --                                       ------>ZmHOX2a(2)               <-------MYC3                --                                      <------ZmHOX2a(2)                ------->MYC3                ==        ------>MYB83                 <---------ARR14(2)        --------->YAB1                     <--        ------>MYB46(1)              --------->ARR14(2)     <----------DOF2                       === >MYB52(2)                      <------------CBF          --------->At4g35610                    ---- -MYB46(3) ----------->GT1     --------->ATHB12           <---------At4g35610                    <---   tctcaaaaccaaatggtttttttttttttttgtttattggatccattaaggtgttcagacagctataatgccatgtgtttccttcgctcaaaacgtcgag  25772600                   --------->TOE1(2)                  <---------ANAC55(2)           --------->ARR14(2)           <---------ARR14(2)          <------ZmHOX2a(1)     <---------ARR14(2) ---->ZmHOX2a(2)  --------->ANAC55(1) --------->GT1    --------->ANAC55(2) ================HOX2a_HOX2a    --------->ARR14(2) ----ZmHOX2a(2)   --------->ANAC58                                                 --------->GLK1(1) ================HOX2a_HOX2a   <---------GLK1(1)               --------->ATHB12 --------->ANAC58 ----->ARR11(3)   --------->ANAC58           --------------->AGL15     <-----------TBP ------ARR11(3)   --------->ANAC46        <-----------GT1   <------------CBF    --------->ANAC58   atcgtaaacagaggaaccatacgtaagagaaacaaatccgataaataccatttttgtaatgaaattgatttgtttttgtagtaagaaatctaaacatttg  25772700                                                                    <---------ANAC58                                                                    <---------ANAC58                                                                   <---------At4g35610                                                                   --------->ZAT2                                                                   <---------ZAT2                                                             <---------ANAC46                <---------ANAC46                             <---------ANAC58               <---------ZAT2<---------TOE1(2)               <---------ANAC58               <---------At4g35610                      --------->ATHB12              ------->TEIL   <---------TOE2(2)<---------ZAT6<---------MYB46(3)         --------->GLK1(1)  <-----------RAV1(2) <---------MYB52(1) --------->At4g35610        --------->ARR14(2)--------->ANAC58    <---------ANAC58 <---------REM1(1)<---------DAG2        <---------ARR14(2)--------->ANAC58    <---------ANAC58 <---------MYB46(3)            --------   <---------LBD16       ------->TEIL <-------TEIL    <----------DOF2           <----------DOF2   gattttgggggaaatgcagcttgtatgaacgcaggtttgattcatctagcgttaggctttattggttgtagctggctctacgcttttccaaaccggtcta  25772800                                         <---------DAG2                                         <----------DOF2                                     <---------MYB52(1)                                   <---------ANAC55(2)                                   <---------ANAC58                                   <---------ANAC46                    <---------ANAC58 ----------->HVH21                    <---------ANAC46--------->LBD16            --------->ANAC58        <---------HSFB2a(1)        --------->ANAC55(2)         --------->ANAC58           --------->LBD16        --------->HSFB2a(1)        <---------ANAC58 <---------CCA1(2)     --------->ARR14(2)   --------->HSFB2a(2)             <---------bZIP60(2)         --------->ANAC46          --------->LBD16 ->WRKY18(1)        <---------ANAC58--------->At5g28300 <----------DOF2   <---------ARR14(2)   ggcttagggaacatttcgcattgcctgaagaaccatgccgtgactttttagtccatctcttttgcaccccatgcgctatctgccaagagtcccgagaact  25772900                  ------>ZmHOX2a(1)                ------>ZmHOX2a(2)              --------->ARR14(2)              <---------ARR14(2)           <------NtERF2          <---------At4g35610          --------->At4g35610          ------>NtERF2         <---------ANAC46         <---------DEAR3(1)        --------->ATERF1(1)        ------>NtERF2        --------->RAP2.3(1)        <------NtERF2                                        <------NtERF2       <---------DEAR4(2)                                   --------->LBD16       <---------ATERF1(1)                                  ------>NtERF2       ------>NtERF2                                       --------->LBD16       <---------RAP2.3(1)                       <---------CCA1(1)      --------->ANAC46                           <---------RVE1(1)      <---------DEAR3(1)                        <---------GLK1(2)     <---------LBD16                            --------->ARR11(3)                                 <-    --------->DEAR3(1)                          <---------ARR11(3)     <---------REM1(1)           --   --------->MYB46(3)                       ---------->DOF2--------->ANAC46                        -- --------->ARR14(2)                      <----------DOF2  <---------LBD16                       <---- <---------ARR14(2)              <---------At4g35610      --------->LBD16 <-----------GT1 ---------->DOF2   caagaaccgcggcgctgatccttctatcggtattcatctaatgctttaaagatttttttccccggcaaacttgatgtaacaacatgaaaacataaagatt  25773000                                                                                 <-----------GT1                                                                              ----------->GT1                                                                            ---------->DOF2                                                                       --------->LBD16                                                                      =================bZIP_DOF                                               =================================bZIP_DOF                                               <----------DOF2        <---------ANAC58          <----                                              <---------ANAC58        <---------ANAC46  ------>MYB46(1)                                              <---------ANAC58        <---------O2      ------>MYB83- --------At4g35610                       <------ZmHOX2a(1)            <---------ANAC58--------->AtMYB61 ------->At4g35610                    <---------LBD16                 <---------TGA1a --------->DEAR3(1) ------->ZAT2    <------------------------ANAC81                     <-----------------------TaNAC69(2) ---TEIL  <---------ARR11(3)        <-----------GT1                  <------NtERF2 <---------ALFIN1--   cagcttacacaatatgttttttttttttttttgtgatttttcaggatggctttcgaatgtagagaaatggagccgtgagaaagtaacacctcccatagtt  25773100                                                                                   <-----------RAV1(2)                                                                                 <-----------HVH21                                                                               <---------At4g35610                                                                        ------>ZmHOX2a(2)                                                                       <------ZmHOX2a(2)                                                                      --------->ARR11(3)                          --------->ANAC55(2)                         --------->ARR14(3)                          <---------ANAC55(2)                         <---------ARR14(2)                          --------->ANAC58                            --------->ARR14(2)        --------->ATHB12  --------->ANAC58                            <---------ARR11(3)       <---------YAB1     --------->ANAC46                            <---------AGP1       --------->ICU4     --------->ANAC55(1)                         <---------ARR14(3)     -------- -----REM1(1)            <---------LBD16                             <---------CCA1(2) --------->ALFIN1 ---------->RAV1(2)  <----------DOF2              ----------->GT1   ----------->ARR10<---------At4g35610 ----->TEIL     --------->YAB1   <---------RAP2.6(2)        <----------DOF2    --------->At4g35610   gtacctggcatgattcgatgatactttcacgcaatgcggctattatctcttacggtttaaaacttttctgtagatcttgtaagcttcaggtgtttctcag  25773200  Previous    Next  AGI:  At1g68630.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G58320.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42113.1); contains InterPro domain Protein of unknown function Cys-rich (InterPro:IPR006461) Range:  from: 25772725    to: 25773121    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version