Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    <---------------AGL15                  --------------->AGL15                 ----------------->AGL1                 ----------------->AGL2                 ----------------->AG                 <-----------------AGL2                 <-----------------AGL3                 ----------------->AGL3               <-----------GT1                                                       <----------DOF2            <---------ARR11(3)                            --------->At4g35610       --------->TOE2(3)            --------->ARR11(3)                            <---------At4g35610     ------>MYB83            --------->AHL20(1)                           <---------ARR14(2)       -------->P            <---------AHL20(1)                           --------->ARR14(2)     --------->AtMYB61           <---------AHL20(2)      <-------TEIL    <----------DOF2             --------->MYB46(3)          --------->ICU4       <---------AHL20(2) ------>ZmHOX2a(2)     --------->DAG2       --------->AHL20(2)     --------->YAB1    --------->ARR11(3)     ---------->DOF2      <--------     ----------->GT1     ----------->GT1        <---------ARR11(3)<-----------GT1 ------>MYB46(1)   tactactaagtaaatattttccatatatagtataatattcatctacattcgatctttggtatctgaaattaccaaaagtaaaccaacctttgtgaatcca  25750000                                                     --------->ICU4       <---------ANAC58                         ----------->HVH21       <---------ANAC46                         --------->ANAC46                           <---------       <---------ANAC58                      <---------ARR14(2)                     <----------DOF2  <----------DOF2                            --------->ARR14(2)                     <---------DAG2 --------->TOE2(3)---------->DOF2           <---------GLK1(1)                  <-----------GT1    --- -ARR14(2) <---------CCA1(2)     --------->ICU4 <---------ETT(1)             <---------ATHB12   <----   aaacctttttcttgtatattcaaagatgtattggaataatgcatatatatccgacatgtttactgaaaacagacattcaataaacccttttttttacctc  25750100                                                      ----------->GT1                                                      <------MYB46(1)                                                  <---------MYB46(3)                                                  --------->ATHB12                                      <---------At5g28300                       <-------GAMYB                                     <-----------GT1<---------WOX13(1)         <---------MYB46(3)                          <------NtERF2         <--------P                     <---------DEAR3(2)                          --------->LBD16     ----------->GT1                 <---------DREB2C(2)                          ------>NtERF2----------------->AGL1                 <---------DEAR4(1)                         --------->RAP2.6(2)  --------->ATHB12                <---------At1g77200     <---------TOE2(3)   --------->DEAR3(1)   <---------MYB46(3)           --------->bZIP60(1)    --------->YAB1      --------->RAP2.3(1)  <---------AtMYB61  <------ZmHOX2a(1) --GT1                  <---------LBD16<---------LBD16<------MYB83         <---------bZIP60(1) ------>At5g28300     --------->DEAR3(1) --------->LBD16    --------->TOE1(2)--------->DDF1 -----DEAR3(1)    <-------TEIL    <---------ICU4<---------WOX13(1)    --------->YAB1   ggtgaataatgttttgtagcttcatcgccgcataaatttttaccggaatggttgattggtaaactaggactagtatgatgtcggttgaagcattgtccca  25750200                                                                     <---------ARR14(2)                                                                     --------->ARR14(2)                                                                     <---------ARR11(1)                                    --------->ARR14(2)               --------->ARR11(3)                                    <---------ARR14(2)               <---------ARR11(3)                                 --------->LBD16                    <---------CCA1(2)            ----                               <---------LBD16                      <---------ARR14(1)           <---                              ------->TEIL                          ------>MYB83                 <---                        <---------YAB1                     --------->ANAC46                     <----                      --------->CCA1(2)                    --------->ANAC55(1)                 <-----                     <---------ARR14(2)                 <---------WRKY38(1)               <---------ANAC58                     --------->ARR11(3)              --------->LBD16------>MYB46(1)  <---------AHL20(2)                     --------->ARR14(2) --------->LBD16 <---------WRKY12 ----------->GT1  <---------ANAC58                     --------->ARR11(1)<---------HSFB2a(2) --------->ANAC58  --------->AHL20(2)<-----  --------->YAB1     <---------ARR11(3)--------->HSFB2a(2) --------->ANAC58  <---------AHL20(2)<-----   tctttcaaaataccaatttcgaagatatgatgaaccggaatccagaaattcaatccggtccacgtaaaccaaatcttgtttaaatttttaattcgtggct  25750300               <-----------TGA1               <-----------HVH21              --------->bZIP60(1)              --------->TGA1a              --------->bZIP60(2)              <---------O2              --------->ANAC58       <---------ICU4                         --------->DEAR3(2)    --------->WOX13(1)                        --------->ANAC58   --------->AHL20(2)                        --------->SPL7   <---------AHL20(2)                       --------->SPL1(1)  --------->ICU4     <-----------HVH21     <---------SPL7----------->RAV1(1) <---------ZAT2 ----------------------->TaNAC69(2)       --------->TOE1(1)             <---------ZAT18 ------->GT1  <---------TGA1a             --------->TOE2(1)<---------ALFIN1  ----------->RAV1(2) ---MYB83--------->At4g35610             <---------------AtSPL3        <-----------GT1 ---MYB46(1)  ============================bZIP_DOF       ================================RAV -----MYB46(3)--------->O2 <---------MYB52(1)--------->SPL1(2)       <------------CBF ----ANAC46   --------->ANAC46          <------------------SPL14    <---------ICU4 ----ANAC58   --------->ANAC58     <-----------GT1       <---------ALFIN1    --------->ZAT2 ----ANAC58  <-----------STF1  <----------DOF2--------->ANAC58  ----------->TBP------>ZmHOX2a(1)   *TSS   ggtaattaatcagtagacgtcactgtcccgttcctttatacatctcgtacggacgagagccacactataaatattgccctcctggctaatgccattttca  25750400                                                   --------->ANAC46                          --------->AHL20(1)       --------->ANAC58                    --------->ANAC58          <---------YAB1                    --------->ANAC55(1)     -------->HAHB4                    --------->ANAC58        -------->ATHB1                    ----------->GT1         --------->YAB1                    --------->YAB1          <--------HAHB4                    --------->ANAC55(2)     <---------ICU4                    --------->ANAC46       <---------ATHB51                  --------->MYB52(1)       <---------ATHB12                                   <------                 ------->GAMYB             --------->ICU4                         --------->ANAC58  -                --------->MYB46(3)         <---------YAB1         --------->YAB1  --------->ANAC58  <                <---------MYB52(2)       <---------ICU4  --------->WOX13(1)     ---------->DOF2<-----                <---------MYB55(2)<---------ICU4   --------->ANAC58         <------ZmHOX2a(1) -------           <-----------GT1<---------AHL20(1)--------->ATHB51--------->YAB1  =========================   acacttacaagttttacaacaaacgtaatatataaaacattactaattattacaagaaacaatcagaaacatcatggaggagcaaagcaagaacaagatc  25750500     ----------->GT1                              <---------ICU4                          <---------AHL20(2)    >>>>>>>>>TBF1                                --------->AHL20(2)                       --------->ARR11(3) ---ARR11(3)                           --------->MYB52(1)                                 <---------ARR11(3) -------->ZAT14                       ---------->DOF2<-----------GT1                      --------->AHL20(2) ---------ZAT14                      --------->AtMYB61<---------At5g28300                 --------->AHL20(1) -ZmHOX2a(2)                  ------>MYB83       <---------AHL20(2)                       <---------AHL20(1) -->ARR11(3)                  ------>MYB46(1) ----------->GT1               ----------->GT1         < =HOX2a_HOX2a               <---------MYB59   <------ZmHOX2a(1)  --------->REM1(1)       --------->AHL20(2)   agtgaagaagaaaaacaactccatgggagaccaaatcgaccaaagggaggattaattaccatgcccttcatcttcggtatgaaaaaacaaaatatattca  25750600                                                                           --------->CCA1(2)                                                                          <---------ARR14(2)       <-                                                                   <---------SPL7                  <-                <----------DOF2                                  <---------At4g35610              <--             <---------ARR11(3)                           <---------ARR11(3)                    -----             --------->ARR11(3)                           --------->ARR11(3)                    <----       <---------AHL20(2)                                 <---------AHL20(1) ----------->GT1  <------      <---------YAB1                                   --------->YAB1     --------->ARR14(2)  -------    <---------ICU4                                    <---------ATHB12    --------->ARR11(3) --------   <---------YAB1                                    <---------TOE2(3)    <---------ARR11(3) <-------   --------->ICU4        --------->AHL20(2)         --------->YAB1<---------MYB52(2)         <------- ---------YAB1 ------>ZmHOX2a(2)            <---------AHL20(2)   --------->At4g35610    --------->MYB52(1)   atatgattattatttgatcttttgtgaaaaaatatgaagttgatatataatctctaatgatatattcagcgaacgagatatgtgaaaaattagcggtggt  25750700      --------->ANAC58      --------->AtLEC2      --------->ANAC46      --------->ANAC58     <---------LBD16 --------ANAC58 --------ANAC58                                 --------->TOE1(3) ----NtERF2                             --------->REM1(1) ---->ALFIN1                        <---------At4g35610 -----ANAC46                        --------->At4g35610---------->DOF2 ---MYB46(3)            <---------ANAC55(2)  ------>MYB46(1)                          <------NtERF2 -->MYB55(2)            --------->ANAC55(2)  ------>MYB83     --------->MYB46(3)      ----------->HVH21 ->ALFIN1             <-----------GT1   <---------ALFIN1     --------->At4g35610     --------->LBD16 --DEAR3(1)   <---------YAB1        --------->ZAT2   --------->MYB46(3)              ------>NtERF2 --AtMYB61  --------->YAB1      <---------ALFIN1--------->TOE2(3) <---------ALFIN1 <---------LBD16   ggggtttcacgcaaacatgataagttacttaacaacacagcttcaccttcccttaaccaaagcagccaacactctcacaaacttcgccgggacatcgagt  25750800                                            <---------ARR14(2)                                         ----------------->AGL1                                         <-----------------AGL1                                         <-----------------AGL2                                       <---------SPL7                                       ------>NtERF2                                       <---------ATERF1(1)                                       --------->ORA47(1)                                  --------->AHL20(2)                                      <---------ATERF1(2)                             <---------TOE1(2)                                      --------->DEAR3(1)                             <---------MYB52(1)                                      --------->ATERF1(2)                          --------->YAB1                                      <---------DEAR3(1)                      <---------MYB59                                     --------->ATERF1(1)        <---------ANAC58------>MYB83                           ------>NtERF2<------NtERF2      <---------DAG2     <---------MYB111(1)                  <----------DOF2    <---------LBD16 --------->AtMYB61   --------->At4g35610               ------>NtERF2        <---------RAP2.3(1)    <----------DOF2  -------->P<---------TOE2(2)     ------>ZmHOX2a(1)    --------->DEAR3(1)--------->ARR14(2)  <---------ANAC58------>MYB46(1)   cttactcctctccttggtgcctttatcgccgactctttcgccggccgattttggaccatcacttttgcttccatcatctaccaaatcgtaagtttatata  25750900  Previous    Next  AGI:  At1g68570.1    Description:  proton-dependent oligopeptide transport (POT) family protein. similar to proton-dependent oligopeptide transport (POT) family protein [Arabidopsis thaliana] (TAIR:AT3G54140.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42129.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO18244.1); similar to hypothetical protein OsI_021662 [Oryza sativa (indica cultivar-group)] (GB:EAZ00430.1); contains InterPro domain TGF-beta receptor, type I/II extracellular region; (InterPro:IPR000109); contains InterPro domain MFS general substrate transporter (InterPro:IPR016196) Range:  from: 25750399    to: 25753938    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g68568.1    Description:  other RNA Range:  from: 25750640    to: 25751317    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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