Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                 <---------ANAC46              <-----------------------TaNAC69(2)             --------->ZAT14 ----------->GT1             <---------ZAT14 <---------ANAC46 <---------ANAC58       <-----------HVH21     ============================MYC_MYB       <-----------TGA1      <---------O2 <---------ANAC46      --------->ANAC46       --------->O2 <---------ANAC58    <---------ANAC58         <---------TGA1a  <---------ANAC58         --------->MYB52(1)    <---------ANAC58         <---------ANAC55(2) <-------GAMYB     <-----------ARR10    <---------ANAC46   --------->ANAC46   <---------ANAC58----------->GT1          <---------ATHB12<-   gttgtttcgcgtcagtgatgtgaacacgaagacgtgaatcagtttcgtgcctgttggaaagagtaaacaaatctaacggttagaaatcaagaagagtttt  25741300                          <---------ARR14(2)                                  <---------ARR11(3)             --------->ALFIN1         --------->ANAC55(2)                     --------->ARR11(3)           <---------ANAC46         <-----------GT1                           <---------GLK1(2)           <---------ANAC58   <------MYB46(1)                   --------->bZIP60(1)      <---------REM1(1)   --------->ARR14(2)                    <---------bZIP60(1) <---------ANAC55(2)     <------ZmHOX2a(1)                      <---------GLK1(1)      <----------DOF2 --------->ANAC58      <---------TOE2(2)----------->HVH21       --------->GLK1(1)   ---------->ID1 --------->ANAC58    --------->TOE1(2)<---------ANAC58     ----------->GT1  ----------->ARR10 --------->ANAC55(2) --------->TOE2(2)<---------ANAC58    --------->ALFIN1--------->LBD16 -------P  <---------ANAC58   <------MYB83       --------->CCA1(2)       <---------ANAC46        <---   ggtaagtaatgtagggtgcgaaacataggatttggtttttacttgacgaagagacgaagagtggtgatatcagagccgtagattttgttcttttgtttga  25741400                                                                                      <---------ANAC58                                                                                      <------MYB46(1)                                                                                      <---------ANAC58                                                                                      <------MYB83                               --------->GLK1(2)                                     --------->MYB55(2)                              <---------GLK1(2)                                      <---------MYB46(3)                              <---------ARR14(2)                                     <---------DEAR3(1)                             <---------HSFB2a(1)                                  <---------ANAC46                             --------->HSFB2a(1)                                  <---------ANAC58                      <-----------HVH21                                           <---------ANAC58                     --------->DEAR3(1)                   <----------DOF2        <---------MYB46(3)                  --------->AtMYB61             --------->MYB52(1)               --------->MYB55(2)                 <---------ABI4(2)              ------>MYB83                  <---------ARR14(2)                 --------->MYB46(3)             ------>MYB46(1)              <------ZmHOX2a(1)            <---------ATHB12----------->ARR10  --------->MYB55(1)          <---------TOE1(2)        --------->MYB46(3)<------NtERF2       --------->AtMYB61    <---------MYB46(3)--------->MYB111(2) ------ANAC46    <---------MYB55(2)           <---------MYB59    <---------MYB52(1) --------->ALFIN1<   cttggagataaccaatgaaaccaccgtcgggagattcttcgatggagaccaaacggtagcctttgccgatggttttgtaggattgggtgggtgagaaaca  25741500                                                                                    <---------ZAT14                                                                                --------->ANAC46                                                                              --------->ZAT6                                                                            <-----------GT1                                                                   <---------------AtSPL8                                                                   --------------->AtSPL8         <--                                                   --------->ANAC58<---------------AtSPL3    --------               ------------------------>ANAC81     --------->ANAC58--------->ALFIN1 --------->ZAT14    ---------->DOF2         ---------->DOF2      <------ZmHOX2a(1) --------------->AtSPL3--------->ZAT14 ------ZmHOX2a(1)   ---------->DOF2   <xxxxxxxxxxxxxxxxxxsmallRNA(se3)   <----------DOF2 <---------ZAT14   gaggattaaagctagaagaagagaaagagagaaagctagagatgaagaagaggaagccatggctatagagtggtactttaacactctacagtgtaatgaa  25741600                                        <---------ANAC58                                       <---------At4g35610                        --------->AHL20(2)                              --------->HSFB2a(1)                                 <---------AHL20(2)                             --------->ARR14(2)                                 --------->CCA1(2)                            ------>MYB83<---------ANAC58                       --------->ARR14(2)              ----------->GT1------->TEIL                          --------->ZAT6 ----------->TBP      --------->CCA1(2)     ------>MYB46(1)                      *TSS--------->ANAC46  ----------->GT1 ----ZmHOX2a(1)    ---------->DOF2 <----------DOF2              <---------ZAT18<---------ARR14(2) --- ->ICU4 --------->ALFIN1  <---------MYB59   <---------YAB1   <---------ANAC46 <------ZmHOX2a(1) <----   ggagagagagatggaggggtttaaagaaccgaaccctctttagcttatggttcttgataagttttgtgaacactaaacgaggatataaatagtagaatat  25741700                                                                                           --------->YAB1             <------ZmHOX2a(1)                                                          --------->WOX13(1)            ----------->GT1                                                            ==============           <---------TOE1(3)                                                         <---------AGP1       <----------DOF2                                                         <----------DOF2    <---------RAP2.6(2)                                                     --------->ARR11(3)   <---------LBD16                                                          <---------ARR11(3) ------>ARR11(3)    <-----------GT1             <----------DOF2  --------------->AtSPL8------>ZmHOX2a(2) -----YAB1 <---------TOE2(3)          <-----------GT1     <-----------GT1  <---------CCA1(2)   gattttgcggtttaaggaaaattaacaaaactactacaaattacaaatttctttttgtttttactattttgttccctaaatcttttggatctatcacatt  25741800                                   <-----------RAV1(1)                              --------->YAB1          ---------->ID1                            <---------YAB1     <----------DOF2                         <---------YAB1  <-----------GT1   <---------DAG2        <---------AHL20(2) --------->ARR11(3)                       --------->MYB46(3)   <----------DOF2      --------->AHL20(2)  <---------ARR11(3)                     <-----------GT1 ------>ZmHOX2a(1)    --------->ICU4  ----------->GT1<-----------GT1    --------->GLK1(2) =======HOX2a_HOX2a   <---------YAB1  <---------REM1(1)   <----------DOF2  <----------DOF2   atcctctttttgtttacatatatcatttttattaatactgttgtaacatcttttttttctctttctcaatagataatcttttttttaacaactatacatt  25741900                  --------->YAB1                 <---------YAB1              <---------AHL20(2)           <---------AHL20(2)           --------->AHL20(1)           <---------AHL20(1)           --------->AHL20(2)         <---------YAB1        --------->AHL20(2)      <---------AHL20(2)     --------->YAB1                                                           --------->YAB1    <---------AHL20(2)                                                      --------->AHL20(2)   --------->AHL20(2)         --------->YAB1                     <---------WOX13(1)    --------->DAG2 <---------ARR11(3)           <---------ICU4                  <---------YAB1--------->AHL20(1) --------->AHL20(1)          --------->ICU4                 --------->YAB1 --------->YAB1          -- <---------AHL20(1)     --------->YAB1              --------->YAB1    <-------TEIL    ---------->DOF2   caatatataatattatattatgaaaatgagaataatgaaatcgtcttatttctatcatacaaatatgatagattcaaaaataataaacaaaagtgataga  25742000                                                          <---------ANAC55(2)                                                        --------->AHL20(2)                                                     -------->HAHB4                                                     <--------ATHB1                                                     --------->ATHB51                                                     <--------HAHB4                                                     <---------ICU4                                                     --------->YAB1                                                    --------->ICU4                                                    <---------YAB1                                                    <---------ATHB51                                                    --------->AHL20(2)                      <--------                                                  --------->YAB1                            <--------                 --------->DAG2                  <---------AHL20(2)                         <--------       --------->TOE2(3)       ----------->GT1  --------->AHL20(2)                     <---------ICU4 --------->GT1  ---------->DOF2<---------ZAT6<----------DOF2     ----------->RAV1(1) <---------TOE2(3)   aatgaaaaacctttgaagaaaagtagtggaatagagtaaattctcttctttttaataattacataaacaacaggtatatgtgtgattaagaattatgtgt  25742100                                                                      --------->ARR14(2)                                                                      <---------ICU4                    --------->YAB1                               <---------YAB1                 --------->WOX13(1)                             --------->TOE2(3)                ------>ZmHOX2a(2)                              --------->YAB1 -YAB1        --------->ARR11(3)               --------->ZAT6 <---------YAB1 -ANAC46      <---------ARR11(3)      <---------ICU4        --------->YAB1                          < -ANAC55(1) <---------ZAT6            --------->YAB1     <----------DOF2       --------->ZAT6     <--   gtatgagtattgtagtgatctatcatctatcttatatgaaacatgacaaacactaatttcttttatcatcaatatttgcaaacactaataggcaagtgta  25742200  Previous    Next  AGI:  At1g68560.1    Description:  ATXYL1/XYL1 (ALPHA-XYLOSIDASE 1); alpha-N-arabinofuranosidase/ hydrolase, hydrolyzing O-glycosyl compounds / xylan 1,4-beta-xylosidase. Identical to Alpha-xylosidase precursor (XYL1) [Arabidopsis Thaliana] (GB:Q9S7Y7;GB:P80846;GB:Q9ZP26); similar to alpha-xylosidase, putative [Arabidopsis thaliana] (TAIR:AT3G45940.1); similar to alpha-glucosidase 1 (AGLU1) [Arabidopsis thaliana] (TAIR:AT5G11720.1); similar to alpha-glucosidase [Solanum tuberosum] (GB:CAB96077.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42133.1); similar to alpha-D-xylosidase [Tropaeolum majus] (GB:CAA10382.2); contains InterPro domain Glycoside hydrolase, Range:  from: 25737845    to: 25741665    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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