Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  <---------HSFB2a(1)                                                --------->HSFB2a(1)            <---------ANAC58                   ------->TEIL            <---------ANAC58                  ------>MYB83      <----------DOF2                       <---------MYB59               <----------ID1      <---------DAG2                     --------->MYB52(1)             ---------->DOF2 ---->WOX13(1)                         ---------->DOF2        <---------------AGL15             ----- >RAV1(1) <-----------GT1   <------ZmHOX2a(2) ------>MYB46(1) ------>ZmHOX2a(1)                 -----   atcaaacccttttttcttgttgattatcagatcgaaacccaaaaaaccgaacctttcactgttcctgttcttggaaaagacaaaacaataagtgagaaac  25731000                                                                              --------->LBD16                                                                              <---------LBD16                                                                          --------->GLK1(2)                                                                         --------->GLK1(1)    ------>MYB46(1)                                                      <---------GLK1(1)    ------>MYB83                                                      --------->ANAC58 ---->ANAC58                   --------->ARR14(2)                     --------->ANAC58              < ---->ANAC58       --------->At4g35610                            ----------->GT1          <---------YAB1   gaaaccaaataaaacccaaacagctaaaacccagaacccttaagagacagagaagaagatagatagatgggtaagaaatctggggatgagattatttttg  25731100                             ----------->HVH21                            --------->LBD16                           <---------ANAC58                           <---------ANAC58                           <---------ANAC55(1)                           --------->ANAC55(2)                                <---------YAB1                           <---------ANAC55(2)                               <---------AHL20(1)                         <------ZmHOX2a(2)                                   <---------AHL20(2)                        --------->ARR14(2)                                   --------->AHL20(1)                        --------->GLK1(2)                                   <---------AHL20(2)                        <---------ARR14(2)                                  --------->YAB1                       <------ZmHOX2a(1)                                    --------->AHL20(2)                      <---------HSFB2a(1)                               --------->AHL20(1)                      --------->HSFB2a(1)                               <---------AHL20(1)                      <---------HSFC1(2)                                <---------AHL20(2)                      --------->HSFC1(2)                          ----------->GT1       ---------->DOF2                   --------->TOE1(2)                    --------->ZAT14 --------->AHL20(2)          <        <---------AHL20(2)------>ZmHOX2a(2)          ----------->GT1   --------->AHL20(2)    -------- ---------YAB1  --------->MYB52(1)          ----------->GT1    --------->ALFIN1     <---------YAB1<--   ctatgagtatataaaaaaaaacgaaggatccgtgacaattttcacagagaaaaaacagtaaacaagtgttgaaataaattatatttatgaaaaagaaaag  25731200                             <---------HSFC1(1)                             <---------HSFB2a(2)                             --------->HSFB2a(2)                        <---------ARR14(2)                        --------->ARR14(2)                       <---------CCA1(2)                                                        <----       <-----------GT1 --------->GLK1(1)                                                       <----- ---------AtMYB61  --------->ANAC46                                        >>>>>>>>>TBF1      <------ -->DOF2           --------->ANAC58                                  >>>>>>>>>TBF1  --------->ARR11(3) --------DOF2      --------->ANAC58                      --------->YAB1 >>>>>>>>>TBF1   <-----------RAV1(1)   ctttggtttttacaaaataagacgcaaatctctagaagagaacataaacaataaacaaatcacaagatgaagaagaagaagaaaatgaccttgttgctgt  25731300                                                                               --------->ANAC58      <---------YAB1                                                           --------->ANAC58    <---------At4g35610                <---------DAG2                ---------->DOF2 -----MYB52(1)           <----------DOF2                     --------->AHL20(2)--------->ANAC46 --GAMYB        <-----------GT1        <----------DOF2  <---------YAB1    <----------DOF2    <------- -----RAV1(1) <-----------GT1  <----------DOF2 <-----------GT1    --------->YAB1    <----------DOF2 <   tgtttcttctgatttttttctctctctcttttcctttcacacttttttttttcttcttgtgaatgaaataataaagctttcacgctctttatattctgat  25731400                                                <---------------AGL15                                                =====================================================                                      <---------WRKY38(1)                      <---------MYB52(1)---------->DOF2                      <----------DOF2--------->WRKY18(1)                                            <              <---------AHL20(2)    --------->At5g28300                                            <-             --------->AHL20(2)     <-----------HVH21                                              --             <---------AHL20(2)    ----------->GT1   ---------->DOF2                 <---------AHL20(2)            <---------WOX13(1) ----------->HVH21--------------->AGL15          ----------->GT1     --   <---------------AtSPL8      <---------ATHB12--------->MYB46(3)     ------>MYB83   --------->AHL20(1) --YAB1  --------->ICU4    ------------>CBF  <-----------GT1  ---------->DOF2 ----------->GT1-------- -----------GT1  <-----------GT1--------->MYB52(1)--------->AtLEC2    ------>MYB46(1)--------->AHL20(2)   tttaacaagtactgatttatttccctttgttcaatgacggtcaaaagtaaccattcaaagaaaaaaaagaccgactaagaagggaaataaaatatacaga  25731500                                                                  <---------------AGL15                                                                  --------------->AGL15                                                                 ----------------->AGL3                                                                 <-----------------AGL3           <----------DOF2                                       <-----------------AG    --------->YAB1                                               <-----------------AGL1    <---------ICU4                                  <------ZmHOX2a(1)   <---------TOE2(3)   --------->ICU4                 --------->At5g28300            ----------------->AGL2 --------->YAB1                  <---------------AGL15  <---------AHL20(2) ================================================MADS_MADS       ----------------->AG------>ZmHOX2a(1) ---------AHL20(2)               ----------->GT1  --------->MYB59----------------->AGL1 --------AHL20(1)         --------->YAB1     --------->ICU4      <-----------------AGL2  <---------AHL20(2) ------->AHL20(2)  ------->GAMYB =================================================MADS_MADS ------->AHL20(1) --------->MYB46(3)    ----------->GT1 --------->AHL20(2)<------ZmHOX2a(1) ->ANAC46------->TEIL  --------->WOX13(1) ----------->GT1      <-----------GT1      <---------MYB59--   atataatcatgaactttgtaacagccaattagaaactgtaaatggtgaaaattaggaataaaatataaccaatttaggaagtcattcctaatttatagca  25731600                                      <---------ANAC58                                --------->AHL20(2)                                <---------AHL20(2)                               --------->AHL20(2)                            <---------AHL20(2)                           --------->ARR11(3)                         <---------ANAC58                           <---------AHL20(1)                         <---------ANAC58                           --------->AHL20(1)                   --------->ARR11(3)                           <---------ARR11(3)                   <---------ARR11(3)                           --------->AHL20(2)                <---------AHL20(2)                           <---------AHL20(2)             <---------AHL20(2)                          --------->AHL20(2)             --------->AHL20(2)                    ------                        --------->AHL20(2)  <---------AHL20(2)<---------AHL20(2)  ----------->GT1                      --------->AHL20(2)   --------->AHL20(2)--------->AHL20(2)   <---------ZAT6 ----                  --------->ANAC58    <---------ANAC58   <---------AHL20(2) <---------YAB1     <----- ------->YAB1     --------->ANAC58 <---------WOX13(1)<---------AHL20(2) <---------MYB52(1)  ---------   aaaatcacatttactgacccaagaaaaaatatatttaattgcctattaaatgtattgaattaaataaatcttccgttttttatagagttaacaaaaataa  25731700                     <----------DOF2                   <----------DOF2               --------->ALFIN1             --------->ALFIN1                                    <---------ZAT6         <---------ZAT14                              <---------AHL20(2) --->MYB52(1)<-----------RAV1(1)           <---------ANAC58 <------MYB46(1)                         < ----->ZAT6  <---------ANAC46              <---------ANAC58 <------MYB83                  ---------->DOF2 ------GT1   <---------ZAT6              <-----------GT1   --------->MYB59  <---------AHL20(2)      - >YAB1   --------->ZAT14           <---------AHL20(2) --------->AHL20(2)    --------->AHL20(2)  <----   cagtatttgactgtagtgtggctcttttgacttgaatttttttttgcgttacatttttaatttggtagtattagaaaattaaaaaaaaaaaaaaaagagg  25731800                                        <---------AHL20(2)                                        <---------ICU4                                     --------->YAB1                                    <---------AHL20(2)                                   --------->AHL20(2)                            <------ZmHOX2a(1)                ---------->DOF2                    <---------------AGL15               --------->ICU4                    --------------->AGL15           <------NtERF2                   <-----------------AGL3       <---------At4g35610                         <--------    ----------->GT1<-----------------AGL2       --------->ZAT2                              <-------- ---------ARR11(3) ----------------->AGL3       --------->At4g35610    <----------ID1       <-------- -------->ARR11(3) ----------------->AGL1 --------->ICU4<---------ATHB12            --------->TOE2(3) --ZmHOX2a(1)      ----------------->AG--------->AHL20(2)---------->DOF2          <-------TEIL   aagatttagtataaaaacatttccatttgaggagacatataataaatattagctggcaataaagaaagaagtagggacaaaatatacattaatggcgcat  25731900  Previous    Next  AGI:  At1g68550.1    Description:  AP2 domain-containing transcription factor, putative. Identical to Ethylene-responsive transcription factor ERF118 (ERF118) [Arabidopsis Thaliana] (GB:Q9CA27); similar to AP2 domain-containing transcription factor, putative [Arabidopsis thaliana] (TAIR:AT3G25890.1); similar to AP2 domain-containing transcription factor, putative [Arabidopsis thaliana] (TAIR:AT3G25890.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO42134.1); contains InterPro domain DNA-binding, integrase-type; (InterPro:IPR016177); contains InterPro domain Pathogenesis-related transcriptional factor and ERF, DNA-binding; (InterPro:IPR001471) Range:  from: 25729118    to: 25731364    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g68552.1    Description:  CPuORF53 (Conserved peptide upstream open reading frame 53). similar to CPuORF54 (Conserved peptide upstream open reading frame 54) [Arabidopsis thaliana] (TAIR:AT1G25472.1) Range:  from: 25729118    to: 25731364    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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