Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            <---------AHL20(2)         <---------AHL20(1)         <---------AHL20(2)         --------->AHL20(2)  ------>ZmHOX2a(2) <------ZmHOX2a(2) -------->ARR11(3) -------->ARR14(2) -------->ARR14(3) ---------ARR14(3) ---------ARR14(2) ---------GLK1(2) -------->AGP1                                --------->YAB1 ---------ARR11(3)                           <<<<<<<<<ARR2 --------At4g35610                           <---------ATHB12                               <-------- --------CCA1(2)                        --------->YAB1                                   <-----------GT1 -------->ARR10                      <----------DOF2            --------->ANAC46    <---------MYB46(3) ------HVH21                      <-----------GT1        --------->YAB1           <-------GAMYB   cagatcttcaattttttttttgcaaaaaacttgtttttactttcacaatcaaaacttatttataaaacaccacaatcgaatcgcagttgttatactttac  25723300                                                                                                    <                                                                     --------->ARR11(3)     <<<<<<<<<MYB98                      <---------TOE2(3)       --------->YAB1         <---------ARR11(3)   <---------YAB1                 ----------->GT1       <----------DOF2              <---------CCA1(2) <---------GLK1(2)            <---------AHL20(2)         <---------DAG2     <---------YAB1            <---------TOE2(3) --DOF2   <---------AHL20(2)        <-----------GT1     --------->YAB1          <----------DOF2 <----   ttcgatcgatatataaaaattgttaagaattcatcttataactttatatcatattgaagtataatcgtttatatcttctagtcttttagattatgttact  25723400                                                        ------->MYC2      --------->YAB1            -------->P              --------->TOE1(2) <-------GAMYB    <---------WOX13(1)          ------>MYB46(1)         <-------MYC3     --------->ALFIN1        ----  --------->ATHB12              ------>MYB83            <-------MYC2 <---------ANAC58            <--- <---------YAB1                ------>ZmHOX2a(1)        ------->MYC3 <---------ANAC58            ---- ---------TOE2(3)       ------->MYC3        --------->RVE1(1)    --------->CCA1(2)               <--- ------DOF2             <-------MYC3    --------->AHL20(2)    ----------->ARR10             ------->TEIL   ttgacgattgataaatatcagaaacacatgttcctaccaaaaaaaaatatcagaaacacatgcgaagacatgggtgtgttgaatatgcattatggacttc  25723500                                                                                                    <                                                                                                    -                                                                                                   <-                                                                                                   --                                                                                                 ----             --------->AHL20(2)                                                                  <---            --------->AHL20(1)                                                                  -----            <---------AHL20(1)                                                                  -----            <---------ARR11(3)                                                                  <----            --------->ARR11(3)                                                                  <----     ----------->GT1           >>>>>>>>>>>>>>>>>LFY                            ======================    ----------->GT1            <<<<<<<<<<<<<<<<<LFY                            <----------DOF2 <----- ----->HSFB2a(2)     --------->ARR11(3)                              --------->At4g35610    <-------- ------HSFC1(1)      <---------ARR11(3)                           <---------ATHB12          --------- ----->HSFC1(1)  <---------AHL20(2)                               ----------->HVH21    --------->AHL20(2) ------HSFB2a(2) --------->AHL20(2)      <----------DOF2 ---------->DOF2 <---------ALFIN1   ---------   tagaatgcgttaaaaatatttaaaatctttaaaacccaatgggctttaaaaatcaattcgaaagcccaatgacctgcacttctttgacataaaataaaat  25723600   <---------ICU4  <---------YAB1 <-----------GT1 ---------ICU4 -------->YAB1 --------YAB1 ------->ICU4 ----->YAB1 ------ICU4 ---->AHL20(2) ---->ICU4                                   ------>MYB46(1)             <---------DAG2 -----ATHB51           --------->ZAT18       ------>MYB83            <---------ZAT18           ------ -----AHL20(2)<---------TGA1a         ------->TEIL                   --------->ZAT18     --------->YAB1 =======================bZIP_DOF   <---------YAB1   <----------DOF2--------->At4g35610   <-----------GT1 ----AHL20(1) --------->O2--------->ANAC58  <---------ALFIN1       <---------At4g35610------>MYB83 -AHL20(2)    <---------O2--------->ANAC58 <---------MYB55(2)   ---------->DOF2       ------>MYB46(1) >AHL20(1)    =================================================bZIP_DOF  <----------DOF2 *TSS  ------ >AHL20(2)    --------->TGA1a------->TEIL  --------->MYB46(3)  --------->ANAC46  <-----------GT1   aattatcatttctccaacgtgagagagcacgaatgtgatgaatcacccactctgcttttacatccacaaagctcacttttattaaaccaaatcacaatct  25723700                                       <------MYB83                                       <------MYB46(1)                                   --------->HSFB2a(2)         <---------MYB46(3)        --------->ARR14(2)                                    --------->HSFC1(1)        <-------TEIL     <---------ARR11(3)                      <---------ANAC58        <---------HSFC1(1) <---------ARR11(3)      --------->ARR11(3)       <------ZmHOX2a(1)     --------->REM1(1)<---------HSFB2a(2) --->TOE2(3)         ---------->DOF2  --------->MYB59            <---------ANAC58  <-----------GT1 --->YAB1--------->MYB52(2)        <---------ARR14(2)       --------->ATHB12      <---------ATHB12  <   caatatcacattcgttgcagagacaaagatgtctgagtatttggtaactggaggaacaggtttcattgcttcttacatcatcaaatcacttctcgaactc  25723800                              --------->ANAC55(1)                              --------->ANAC55(2)                              --------->ANAC46                              --------->bZIP60(2)                              --------->ANAC58                              --------->O2                                                          <                              --------->ANAC58                                                      <             --------->MYB46(3)                                                                    --        --------->SPL7     --------->TOE2(2)                                 <----------DOF2    -----      <---------SPL7       --------->TOE1(2)                 --------->WOX13(1)        ------>ZmHOX2a(1)  <---------ALFIN1   --------->ANAC46 <-----------GT1    --------->YAB1  <---------ALFIN1       <---- ---------ALFIN1 ------->GAMYB<---------ANAC55(2)  --------->ZAT6     <-----------GT1----------->RAV1(2)   ggacacaccgttcgaacaactgtccgaaacccacgtaatttctcaattctctcacactagaatcattcaaagtttccacctttaatctcctgattttgga  25723900                                                                                            ---------                                                                                           ------>ZmHOX2a(2)                                                                                         <-----------ARR10                                                                                     --------->ZAT2                                                                                     <---------At4g35610                                                                                     <---------ZAT2                                        <---------YAB1                       --------->GLK1(2) ------MYB46(1)                   <------MYB46(1)                           --------->ARR11(3) ------MYB83 ---------->DOF2      <------MYB83                              <---------ARR11(3) ------->MYB59                  <--------P                                  <---------GLK1(2)-------- ---->ARR14(2)             ---------->DOF2                                  <---------ARR14(2)   ---- -----ARR14(2) --------->DAG2--------->DAG2                                 --------->ARR14(2)  -----   tttggtatttgtattgaaaggtgatgaagaaaaggttggatttttatgggaatttcaaggagcaaaacagaggctaaagattctccaagctgatctaacg  25724000                                                                                          ===========                                                                                          <------ZmHOX2a(1)                                                                                         <---------At4g35610                                                                                       <-----------RAV1(2)                                                                              --------->YAB1                                                                             ====================HOX2a_HOX2a                                                                             ========================                                                                             <------ZmHOX2a(2)      <                                                           =========================HOX2a_HOX2a     < -->HVH21                                                  ------>ZmHOX2a(1)<---------ARR11(3)     <- ->MYB52(1)                  <---------ANAC46  <---------ALFIN1            <------ZmHOX2a(1)      <-- ----->At5g28300     --------->At5g28300       --------->ANAC46            ========================== -->GAMYB     <---------REM1(1)       <---------ANAC46   ----------->RAV1(2)--------->ARR11(3) <-----   gtagaaggaagttttgatgaagcagtgaatggtgttgatggagtattccacactgcttctcctgttcttgttccacaggatcataacattcaggagactt  25724100                     --------->REM1(1)                    --------->SPL7                 ----------->GT1                <---------------AtSPL8         <---------YAB1       ------>ZmHOX2a(1)     ------>ZmHOX2a(2)----------->RAV1(1)                                        --------->ANAC55(2) ===========HOX2a_HOX2a                                                          <---------ANAC55(2) =============HOX2a_HOX2a                                                        <---------ANAC55(1) --------P   ---------->DOF2                                                <------------------------ANAC81 ---------WOX13(1)  <-------TEIL                                  ---------->DOF2<---------ANAC58 ------GAMYB<---------YAB1                                ----------->RAV1(1)    <---------ANAC58 -------MYB46(3)--------------->AtSPL8                 --------->ANAC58  <---------KAN4(1) ===========HOX2a_HOX2a              --------->ARR11(3)--------->ANAC58  --------->KAN4(1)        <-- -----DOF2--------->YAB1--------->MYB46(3)           ---------->DOF2  <------ZmHOX2a(1)           ---   tggttgatcctattataaagggtacaacaaatgtgatgagctcttgtgccaagtctaaagccacattgaaaaggattgttcttacgtcttcttgctcttc  25724200  Previous    Next  AGI:  At1g68540.1    Description:  oxidoreductase family protein. similar to oxidoreductase family protein [Arabidopsis thaliana] (TAIR:AT1G25460.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42135.1); contains InterPro domain NAD-dependent epimerase/dehydratase; (InterPro:IPR001509); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040) Range:  from: 25723689    to: 25725073    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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