Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                         <---------YAB1                                                   --------->ARR11(3)                                                  <---------ICU4            <-----------GT1                      --------->ICU4      ---------->ID1                             <---------YAB1 -------->ARR14(3)                               <---------ATHB12 -------->ARR14(2)                              <---------TOE2(3)                  --------->AHL20(2) ---------ARR14(3)                     --------->ANAC55(2)                    --------->AHL20(2) ---------ARR11(3)                     <---------ANAC55(2)               <---------YAB1 -------->AHL20(1)            <---------YAB1   --------->YAB1<---------YAB1   <---------AHL20(2)    < ---------ARR14(2)       <---------ANAC58    <---------AHL20(2)    <---------AHL20(2)            ---- -------->ARR11(3)       <---------ANAC58    --------->AHL20(2)   <---------AHL20(2)         -------- ---------AHL20(1)    <----------DOF2 <-------TEIL--------->ATHB12--------->AHL20(2)        <--------   aatatcttgacgtttttcatttttctttcgttttgataaatacatattttaatgattttgattttgattttaattttcatttaaaaaaaatcaaatgata  25646000                                                                                             --------                                                                               <---------AHL20(2)                                                                             <---------CCA1(1)    <--                                                                             <---------RVE1(1)   ---- <-------TEIL                                                               <---------GLK1(2)<------MYB46(1) -----------GT1                                                             --------->ARR11(3)------- ------->GT1                                      --------->YAB1            <---------ARR11(3)<------ZmHOX2a(1) ->YAB1   --------->LBD16                        <---------ATHB12         <---------TOE2(3)  <------MYB83 -ATHB12<---------LBD16                 --------->AHL20(2)                <---------TOE1(3)<--------P   agttacattttcccgattgaatgtcatttcaaaacaaaaaaaaaaaatcaaatgataacttctgtttaaaaattttaagatttttttttttgggtaggat  25646100                                                                                                   <-                                                                                                 ----                                                                                                 <---                                                                                              -------                          --------->AHL20(2)                                                  -------                          <---------AHL20(2)                                                  <------          --------->CCA1(2)                                                                   <------         <---------ARR11(3)  --------->ARR11(3)                      <---------------AtSPL3   <------         --------->ARR11(3)  --------->AHL20(1)              <-----------GT1                 --------       <---------TOE2(3)  --------->AHL20(1)                --------->AHL20(2)               <------- --->GT1 --------->AHL20(1)  <---------ARR11(3)         <---------ATHB12            <---------GLK1(1) -------AHL20(2)     --------->AHL20(2)           --------->ANAC58   --------------->AtSPL8  -------- ----->AHL20(2)     <---------ATHB12    <-----------ARR10   <---------AHL20(2)   --------->YAB1 ----- ---->GT1<---------AHL20(1)  <---------AHL20(1)   --------->ANAC58   <---------------AtSPL8  <-------   aaaatttttaagatattagctaatcaaataaaatattctacaaatctaagttaagccactaattaactaaatttgtacttcaatagaaatcgccaataat  25646200        --------->ARR14(2) --------YAB1 ---->HAHB4 ------ICU4 -->ATHB51                                                                                   <------- -->YAB1--------->GLK1(2)                                                                    -------- --HAHB4<---------ARR14(2)                                      --------->DAG2               -------- ---ICU4--------->ARR11(3)                                     ---------->DOF2      <---------ETT(2) --ATHB1<---------ARR11(3)                                    <---------AHL20(2)    --------->ETT(2) ->ICU4--------->RVE1(1)                              <---------ARR11(3)  <----------DOF2    <------- --ATHB12                                        <------ZmHOX2a(2)    <----------DOF2    --------->ANAC58 ->AHL20(2)                                     <---------ARR11(3) <---------ARR11(3)    --------->ANAC58 ---->ICU4              --------->GLK1(1)       --------->ARR11(3) --------->ARR11(3)    ----------->GT1 --ATHB51    ----------------->AGL2   <-----------GT1--------->REM1(1)--------------------->WRI1   tatgcataaaaatctgccaaaatcagatttctatgagatttcactgttacgatctacatcttatataaagttctttctttttttcgtcgacaagaaaatt  25646300                                                                             <-----------GT1                                                                           <-----------GT1                                                                         --------->HSFB2a(1)                                                                         <---------HSFB2a(1)                                                                       <---------GLK1(2)            <          ------->GAMYB                                         --------->AHL20(2)                  <        -------->P                                              ----------->TBP                   <-- --HSFB2a(1)                                                   --------->AHL20(1)                 <-- ->HSFB2a(1)                                                   <---------AHL20(1)        --------->DAG2 ->HSFC1(2)                       ---------->DOF2             --------->AHL20(2)        ---------->DOF2 --HSFC1(2)       --------->AHL20(2)    ---------->DOF2     --------->AHL20(2)  <---------ALFIN1 *TSS   ccacagtttcaaccccaaatttttatattttgaccccaaagaaaaagagaactcaacacaaaaaatatatatagaattttctccacttgtaaaagcggta  25646400  <---------CCA1(2) ------->TEIL                                                           --------->ANAC58 <---------ARR14(2)                                     --------->HSFB2a(2)     ------>ZmHOX2a(1) --------->ARR14(2)                                     <---------HSFB2a(2) --------->ARR14(2) <---------ARR11(1)                                ------>ZmHOX2a(1)    --------->ANAC46 ---------CCA1(2)      <---------ARR11(3)        <-----------------AGL1 --------->ANAC58 ---------ARR14(1)     --------->ARR11(3)        <-----------------AG  --------->ZAT18 -------ANAC58     ---------->DOF2  ------>ZmHOX2a(1)<----------DOF2--------->ANAC58 -------ANAC58---------->DOF2<---------CCA1(2) --------->ANAC46     --------->ANAC58              <--   tcgtatctcttgcccttaaagcaaagaacttgtctctccttctccattcactcctcttttggaacatcacaagcacacaatcctctccgtctctgtttca  25646500                            <---------ICU4                            --------->ATHB12                           --------->ICU4                           <---------YAB1                         <---------ICU4                        <---------GLK1(2)            <------ZmHOX2a(1)                                 <---------HSFC1(2)           ------>ZmHOX2a(1)        ---------->DOF2  --------->YAB1                       --------->HSFC1(2)          --------->TOE2(3) -------ATHB12<------ZmHOX2a(2)                            ---------->DOF2          <---------ALFIN1<   atgaagaaccaaaaggatcaaaactcatcatcattgtcttcttcatcaccatctctaacaacaaagcttctcaatgctcaataccatcacttcctcaatc  25646600            <---------MYB52(1)    --------->ATHB12           <---------DAG2        <---------YAB1      <---------ARR14(2)       --------->YAB1      --------->ARR14(2) <---------ANAC46   <---------ANAC46     <---------LBD16   <---------ANAC58  <-------GAMYB<---------ICU4                                                  ---   <---------ANAC58 <-----------RAV1(1)      ------>ZmHOX2a(1)--------->ANAC46                ------- ----------DOF2   ------>ZmHOX2a(1) --------->At4g35610 ------>ZmHOX2a(1)     <---------GLK1(2)   ---   tcctttcgtattcccttatcctctgttgcggtatcatcatcggcatccttctccattcctctctacaaaacttctcttcaaattcttcacttagcatcca  25646700         <---------At4g35610                             ------>ZmHOX2a(1)         --------->At4g35610                            <---------ALFIN1   <-----------ARR10                                  ------>ZmHOX2a(1)   <---------ARR14(2)                              ------>ZmHOX2a(1)   --------->ARR14(2)                           ------>ZmHOX2a(1)   <---------ARR11(3)                          <---------ALFIN1   --------->ARR11(3)                          <xxxxxxxxxxxxxxxxsmallRNA(se3)  <---------CCA1(2)                          ------>ZmHOX2a(1)  <---------GLK1(1)                         <---------ALFIN1          ----------->RAV1(2)  --------->GLK1(1)                         <xxxxxxxxxxxxxxxxsmallRNA(se3)      --------->ANAC58 ------>ANAC58                            ------>ZmHOX2a(1) ------>ZmHOX2a(1)   --------->ANAC58 -->MYB46(3)                        ------>ZmHOX2a(1)<---------ALFIN1------>ZmHOX2a(1)              < ------>ANAC58                   ------>ZmHOX2a(1)<---------ALFIN1------>ZmHOX2a(1)            ------   acgcatatctcagctatttatagtctcttctcttcctccttctcctcctcctcctcctcctccttctcctccttctgagcccgagcaaaatgggctcaaa  25646800              --------->LBD16                                                               <--------            <------NtERF2                                                                   <--------            <---------LBD16                                   <----------DOF2  <------ZmHOX2a(2)           ------>NtERF2                                    --------->At4g35610======================           --------->MYB52(1)                              --------->ARR11(3) --------->ARR11(3)  <--          --------->DEAR3(1) --------->ANAC58        <---------LBD16    <------NtERF2   <-----------GT1         --------->MYB46(3)  --------->ANAC58 --------->ARR11(3)       ------>NtERF2<---------ICU4---  --------->ATHB12           --------->ANAC46 <---------ARR11(3)      <---------ANAC46 <-----------GT1 ----------DOF2    --------->GLK1(2)   <------ZmHOX2a(1)   <---------ARR11(3) <---------ARR11(3)  --- ---->DOF2<---------ALFIN1   ----------->HVH21<-----------ARR10       <---------RAP2.6(2)  <---------DAG2   agctttattgagccaccggagaagcttatgcacgacatggaggacgaagagcttctctggagagcttcaatggcgcctaagatcaagaattacccttttc  25646900  Previous    Next  AGI:  At1g68390.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G68380.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42175.1); contains InterPro domain Protein of unknown function DUF266, plant (InterPro:IPR004949) Range:  from: 25646397    to: 25649270    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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