Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                              <---------YAB1                                                                          <---------ICU4                                                                        --------->ARR11(3)                                                                      <---------AHL20(2)                                                                     --------->AHL20(1)                                                                     <---------AHL20(1)                                                                     --------->AHL20(2)                                                                     <---------AHL20(2)                                                        --------->TOE2(3) --------->YAB1  <---------RVE1(1)                               ----------->GT1   --------->YAB1 -------->YAB1                             <---------ANAC58     --------->AHL20(2) ---->ZAT6         --------->YAB1          <---------ANAC58   <----------DOF2      ---------->DOF2   actgatattttttatattcaaatatagtctcatgactctaatatttcttgttttgtaacattagcttttaatataatcttgatagaaaagaaaacatcac  25562500                 --------------->AGL15                 <---------------AGL15                --------->TOE2(3)                                                                   <           <---------AHL20(2)                                                                       -          <---------AHL20(2)                                                                      <--          <---------AHL20(1)                                                                    -----          --------->AHL20(2)       --------->YAB1                                      --------->YAB1       --------->YAB1             <---------YAB1   <---------------AtSPL8            --------->AHL20(2)     <---------YAB1             --------->YAB1     --------------->AtSPL8            --------->AHL20(1)     --------->ICU4     ----------->GT1   <-----------GT1                           --------->YAB1<--   attagtcattaataaaattcttaaaaatgtaaaattataagaattaacacattcaagtactatttatgtgttttagttcatgtgaaaaataataaaacca  25562600                                                                                    ---------->DOF2                                                                                  <------ZmHOX2a(1)                                                                                --------->MYB59                                                                        <--------ATHB1                                                                        <---------ICU4                                                                        >>>>>>>>>>AGL22                                                                        --------->ATHB12                                                                        --------->ATHB51                                                                        >>>>>>>>>>AGL24                                                            ------->MYC3-------->ATHB1                                                            <-------MYC3>>>>>>>>>>AGL20                                                           <---------TGA1a<---------WOX13(1)                                                           <---------O2 <------------ATHB5         -------->P                                        --------->ALFIN1 <---------MYB46(3)        --------->MYB52(1)                            --------->ANAC58  --------->YAB1      <---------MYB52(2)                              --------->ANAC58 <---------ATHB51   ------->GAMYB                                  <---------At4g35610<---------------AGL15 <---------TOE2(3)                               --------->MYB59    <-----------------AGL3 -----------GT1                            --------->LBD16 ====================================bZIP_DOF -------->MYB52(1)                       <---------LBD16   --------->O2<---------YAB1 -------MYB52(2)                      <------MYB83--------->At4g35610--------------->AGL15 ---->WOX13(1)                        <------MYB46(1) --------->ANAC46 <---------ATHB12       <------ -------ATHB12   ----------->GT1     --------->MYB59  ----------->HVH21--------->ICU4--------->DAG2   attaacgaactaaccaagtcggataattgtagtttttgtttggtccggagttagctacgacatgtggcatacaataattggttaggaaaagctaagcttt  25562700                                                                            <-------TEIL                                                                          <-------MYC4                                                                          <-------MYC3                                                                          ------->MYC2                                                                          <-------MYC2                                                                          ------->MYC3                                                                          ------->MYC4                                                                          <-------PIF4                                                                          ------->PIF5                                                                         --------->O2                                                                         <---------O2                                                                         <---------ANAC55(2)                                                                         <---------TGA1a                                                                         --------->TGA1a                                                                   --------->ARR14(2)                                                                   <-----------ARR10                                                                   <---------ARR11(1)                              --------->ZAT2                       <---------ARR11(3)   <---------ANAC55(2)                              <---------At4g35610         <---------ANAC58<-------PIF5  --------->ANAC55(2)                     ---------->DOF2                      <---------ANAC58------->PIF4 <---------TOE2(3)                 <---------ANAC46                     --------->LBD16    <---------ANAC46                 <---------ANAC58                    --------->MYB52(2)  <---------ANAC58     <------                 <---------ANAC58 ----------->HVH21  <---------ANAC58    <---------ANAC58     -------             <---------MYB46(3)  <-----------HVH21   <---------ANAC58   ------------>OsbHLH66--------          --------->ATHB12    --------->At4g35610   <-------TEIL  <---------CCA1(2)   <---------DOF5.7(2) ----DOF2--------->ICU4      --------->GLK1(2)  <-------TEIL   --------->LBD16        --------->MYB52(1)   aagagttagagatgatgggtcgtgaaagaagaagctgtcacagtggcacatacgtccgtggcttccccatatctcacgtgcatacggataacgtaatcac  25562800                                                       ------>MYB83                                           --------->TGA2(2)                                          <-----------HVH21                                          <-----------TGA1                                         --------->ANAC58                                         --------->bZIP60(2)                                         --------->bZIP60(1)                                         --------->O2  ------>MYB46(1)                                         --------->ANAC46                                         --------->TGA1a  ----------->HVH21                            --------->O2 <---------TGA1a  --------->DEAR3(1)                            --------->ANAC46           --------->MYB52(1)                       <-----------ARR10 <---------ANAC55(2)                       <---------ARR11(3)<---------O2--------->AtMYB61                       --------->ARR11(3)<---------bZIP60(1)     --------->GLK1(1)                      --------->CCA1(1)  --------->ANAC58--------->MYB46(3)                      --------->RVE1(1)  --------->ANAC55(2)    --------->ARR14(2)                --------->ANAC58        <-----------bZIP910(1)  <---------ARR14(2)                --------->ANAC46  =================bZIP_DOF--------->MYB52(1)                --------->ANAC58  <----------DOF2    <---------MYB59                 --------->DAG2 -----GT1      ------>NtERF2<---------O2<-----------STF1 --------->DEAR3(2)         ---------->DOF2 -->YAB1      <---------ALFIN1   <---------ANAC58   --------->MYB46(3)          <---------YAB1------- ->MYB46(3)  --------->MYB46(3)  <---------ANAC58------>ZmHOX2a(1)       <---------At4g35610------>ZmHOX2a(1)   cattttttctaagtccccacccaaatatctacgtggctttgccacgtcatcctaaccaaaccgacggatttgttcagataatatgaaaaagctcctaaaa  25562900                                           <---------------AGL15                                ------>ZmHOX2a(2)                                               -----                              <---------ARR11(3)              <---------YAB1                 --------                       ------>MYB83        --------------->AGL15                         ------>ZmHOX2a(2)                       ------>MYB46(1)    <-----------------AGL1                  ------>ZmHOX2a(2)            <----------DOF2   --------->ARR11(3)   --------->At5g28300<---------DAG2   <---------ARR11(3) --->DOF2*TSS     <-----------GT1<----------DOF2  ----------->GT1     <----------DOF2  --------->ARR11(3)   acagacagaagaagcttttgtcaccaatctctgatctttttagttctcttatcggtaaaaacttattcttctctttttgttcgatctgtgatctctaata  25563000                                                                    --------->GLK1(2)                                                            -------->HAHB4                                                            --------->ATHB12                                                            --------->ATHB51                                                            <--------ATHB1                                                            <---------ICU4                                                           --------->ICU4                                                           <---------YAB1                                                           <---------ATHB51                                                         --------->YAB1                                                         <---------ICU4                                  --------->GLK1(2)     --------->ICU4                      ----------->HVH21                 <---------YAB1    ---------->DOF2                    <---------REM1(1)            <---------ANAC55(2)--------->ARR14(2) ---->AHL20(2)     <---------TOE2(3) <----------DOF2  --------->YAB1<---------ARR14(2)            <-- ->YAB1     <---------AHL20(2)  <------ZmHOX2a(1)<---------ANAC46<---------TOE2(3)            -------   aactaatttgatattttttttgatgtaacagggaggaatcttttatatgttatgtataataataattgagaatatggaaagagtatgtgagttttgtaaa  25563100                                                                                                   <-                                                                                                   --                                                                                                   <-                                                                                                  ---                                                                                                  <--                                                                                          --------->ANAC58                                                                                          --------->ANAC58                                     <-----------ARR10                                    <---------DEAR3(1)             <----------DOF2         --------->GLK1(2)                                   --------->RAP2.6(3)           ----------->GT1           --------->ARR14(2)                                  --------->SPL7           <---------MYB46(3)        --------->ARR11(3)                                <---------SPL7      <---------ZAT14                <---------ARR14(2)                                ----------->HVH21      --------->ZAT14                <---------ARR11(3)                              <---------LBD16< <---------ARR14(2)                  <---------ARR11(1)                             <---------LBD16<- --------->REM1(2)                  <---------CCA1(2)                   --------->At4g35610       <-- -------ANAC46          <---------At4g35610    <-----------GT1   <-------TEIL  <-----------GT1<------ --->DOF2 <---------AtMYB61         <---------ARR14(1)  --------->AtLEC2<---------At4g35610 <------NtERF2   gcgtatagagcagtggtttattgtatagctgatacagcaaatctttgtttaacatgtgatgcaaaggttcattcagctaattcactctcgggacggcatt  25563200    ----------->GT1  <-------TEIL  ------->TEIL  --------->SPL7 <---------SPL1(1) --------ANAC58 ------->ANAC55(2) --------ANAC55(2) ------------>AtSPL3 -------------AtSPL8                                                                  --------->YAB1 ---------SPL7                                                                        -------->HAHB4 --------ANAC58 <---------YAB1       <-----------RAV1(1)                             <---------YAB1 < -------------AtSPL3       --------->GLK1(2)         <-----------GT1 <----------DOF2 --------->ICU4 - ----DOF2  --------->ANAC55(2)   --------------------->WRI1--------->AHL20(2)  ------->TEIL   <------   tacgtacggttttatgtgattcttgtaagaatcagccttgtgttgttcgatgttttgaccataaaatgtttctttgccatggatgtaatgataagtttca  25563300                                                                                  <---------ANAC46                                                                               --------->ALFIN1          ----------->RAV1(2)                                                <---------ANAC46          <---------At4g35610                                             <---------ARR14(2)          --------->At4g35610                                         <---------LBD16     <------NtERF2                                       ------>ZmHOX2a(1)--------->ARR14(2)    <---------MYB46(3)                          <--------P       --------->ARR11(3) <---------MYB46(3)                         --------->ANAC55(2)  <---------ARR11(3)                -- ---------AtMYB61                          <---------LBD16   ---------->DOF2 <-----------RAV1(1)   -- -------->ALFIN1                     ----------->GT1   ----------->RAV1(2)<---------MYB52(1)   <----- -TEIL <----------DOF2            <---------TOE2(3)   ------>ZmHOX2a(1)  <-------GAMYB         <-----   tggtggtggctcttctgagcatcgtagaagggatttgaggtgttatacgggttgtcctcctgctaaagatttcgcggttatgtggggttttcgagttatg  25563400  Previous    Next  AGI:  At1g68190.1    Description:  zinc finger (B-box type) family protein. Identical to Putative zinc finger protein At1g68190 [Arabidopsis Thaliana] (GB:Q9C9F4;GB:Q8GY83); similar to zinc finger (B-box type) family protein [Arabidopsis thaliana] (TAIR:AT5G48250.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41128.1); contains InterPro domain Zinc finger, B-box; (InterPro:IPR000315); contains InterPro domain Zinc finger, CONSTANS-type; (InterPro:IPR002926) Range:  from: 25562909    to: 25564875    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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