Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              <----------DOF2       <---------YAB1        ------>ZmHOX2a(2)                   --------------------->WRI1                     <---------AtMYB61      <---------ARR11(3)                <----------DOF2    --------------------->WRI1 <---------TOE2(3)      --------->ARR11(3)             <------------------------ANAC81                  <---------TOE2(2) -STY1(2)                         ---------->ID1    <----------DOF2              <---------AHL20(2) >STY1(2)   --------->YAB1    <----------DOF2   ---------->ID1   <---------ARR11(3)   --------->MYB59   ggttccatgatctctcatagtctctgaaaacgctttgtctccctttctttgtttctttctctctcgtgatcatcgaacacaatttacttaggtatggttt  25559700                   <---------AHL20(2)               <----------DOF2           -------->P           ------>MYB46(1)           ------>MYB83<-----------GT1          --------->MYB55(1)         <---------MYB46(2)         <---------MYB55(2)         <---------MYB111(2)         <---------MYB111(1)         <---------YAB1                                            ------         --------->MYB46(3)      --------->TOE2(3)                                <------MYB46(1)         --------->AtMYB61   <---------MYB52(1)        ---------->DOF2            <------MYB83 ------         <---------ALFIN1<---------LBD16    <---------ANAC58                     --------->MYB59         --------->DEAR3(1) <-------GAMYB   <---------ANAC58                     <---------AtMYB61        --------->MYB46(3) --------->LBD16  ----------------->AGL1             <---------MYB52(1)   gaatagcctcaccaaccctttttatttgccggttatcttatttttggcctgattttgtaaagccgagtttgtgccttctcggtttggtttactataacct  25559800                                                    <-----------GT1                                                  <---------REM1(1)   --------->AtLEC2      <---------At4g35610             <------ZmHOX2a(1)      <---------AHL20(2)        ------>MYB83 - --->TOE2(3)                ---------->DOF2      --------------->AtSPL8                ------>MYB46(1) --->TOE1(3)     ------->TEIL       <---------TOE2(3)      <----------DOF2            ----------->RAV1(1)   tcatgtagagcttcccatggacttctctactaaagacttaggatgagtcttgttgtaccatcttttattgtcatgcattcaaaaataccaacaaaattct  25559900                             --------->ANAC55(1)             --------->AHL20(2)                             --------->ANAC46         ------>MYB83                             --------->ANAC58         >>>>>>>>>MYB98                             <---------ANAC55(2)      -------->P                             --------->ANAC55(2)      ------>MYB46(1)              ------>ZmHOX2a(2)           --------->YAB1    <---------ATHB12             <------ZmHOX2a(2)           <---------YAB1 ------->GAMYB             --------->GLK1(1)         --------->YAB1------>MYB83            <---------ARR11(3)    <---------ATHB12   ------>MYB46(1)            --------->ARR11(3)   --------->ANAC58  <---------MYB55(2)            <---------AGP1   --------->ANAC58      --------->MYB46(3)          --------->DAG2  ------            <---------ARR14(2)   --------->ANAC58 --------->ANAC58  ------>MYB83  ----------->GT1            --------->ARR14(2)  --------->WOX13(1)--------->ANAC58  ------>MYB46(1)       --------->MYB46(3)       ----------->RAV1(1)--------->ARR14(2)      --------->ANAC46 --------->WOX13(1)     ----------- --------->DOF2           <---------ARR14(2)  <-----------HVH21<-----------GT1---------->DOF2 <------   actaaagtacaacagatctcaaatgacaaatacgcaatcaactatgatggtcacccaacccaattaaaccaatctgaaaaaaaagtgtgataaccaatga  25560000                        ------->GAMYB                       <---------MYB111(2)                       --------->MYB46(3)           <---------ZAT14             --------->TOE1(2)                     --------->YAB1    ------>NtERF2      <---------MYB52(2)                     <---------At4g35610    --------->PCF2     <---------MYB55(2)                     --------->At4g35610                   < --->YAB1--------->ANAC46       --------->YAB1  <-------TEIL  <---------ATERF1(1)                 --- ->CBF<---------ZAT18----------->RAV1(1)       --------->ALFIN1  ------>NtERF2               <------- ---ATHB12 --------->ZAT14     --------->AHL20(2)            --------->DEAR3(1)          *TSS<-------   aaactcggcccactaaacaggcccaacaaacaaataataaacccaagaggtgcttcttaatcgccgatgcctctcttcatcaaaattcaaaatcactttt  25560100                                                                                          --------->ARR14(2)                                                                                          <---------GLK1(2)                                                                                          <---------ARR14(2)                                      <-----------ARR10                              <------ZmHOX2a(2)                                      --------->GLK1(2)                              --------->CCA1(2) ----------DOF2                       <---------ARR14(2)                            <---------ARR14(2) ------->ID1          --------->AHL20(2)          <-------TEIL                      --------->ARR14(2) ---DOF2            --------->AHL20(2)<---------ARR11(3)        <---------YAB1      --------->ARR11(3) --DAG2 --------->YAB1--------->YAB1  --------->ARR14(2)    <---------GLK1(1)       <---------ARR11(3)   gtcttttcaaaaatcacagcaaaataatattcaaattcaaaatctgtccaaattcatctagggtttctgataaaacagacgaagaagatccaaattcgct  25560200                                                            <---------ANAC46                   --------->GLK1(1)                      <-------GAMYB                <---------YAB1                           <-----------RAV1(1)             <---------AHL20(2)                          <---------MYB46(3)            --------->AHL20(2)               --------->TOE1(3)                <---------ANAC58   --------->YAB1  <---------GLK1(1)         --------->TOE2(3)<---------ANAC46<---------ANAC58   aacaatggtgagaattttatgaattcccaataccccaatttttaaaaccctaattttgtctgttgtgggattgtgttgatgcctgagtttttctgaattt  25560300                                   --------->CCA1(2)                                   <------ZmHOX2a(2)                                  --------->ARR14(2)                                  --------->AGP1                                  --------->ARR11(3)                                  <---------ARR14(2)                                  <---------AGP1                                  <---------ARR11(3)                                  --------->ARR14(3)                                ----------->ARR10                            <------ZmHOX2a(1)                       <---------REM1(1)                       ----------->HVH21          <---------YAB1                     <------MYB83 <---------ARR14(3)                     --------->At4g35610      <----------DOF2                     <---------MYB52(1)           <---------YAB1   ==============HOX2a_HOX2a                           <---------ANAC58         --------->YAB1--------->ALFIN1       --------------------->WRI1        <---------ANAC58       <---------WOX13(1)   ===============HOX2a_HOX2a                          <---------ANAC46     --------->ATHB12<---------At4g35610      <---------DAG2            <------NtERF2    <---------YAB1   <------MYB46(1)------>ZmHOX2a(2)<---------YAB1     <---------At4g35610  <------- <-----------GT1    <---------DEAR3(1)     <---------ALFIN1 <---------ANAC46<---------ARR14(2)   gtattactgattgatgatcagggaggtgaaggagaagatctagagccactttttgattatcgtcgtgttcagccagcgaatttcgtttgtatcgatggtg  25560400                         --------->ZAT2                         <---------ZAT2                                                     <--------                       --------->ZAT14                                                    --------->YAB1                 <-----------HVH21        --------->YAB1 <----------DOF2                 <---------YAB1                <------MYB46(1)    ----------->HVH21     ------>ZmHOX2a(1)               --------->ICU4                <------MYB83--------->ANAC58            --------->TOE2(3)              --------->YAB1          <---------AHL20(2)--------->ANAC58         ------->TEIL   <----------DOF2   --------->ICU4      --------->AHL20(2) --------->At4g35610 ---------->DOF2       <---------ANAC46   <---------YAB1 --MYB46(3)    --------->MYB59 <---------ALFIN1--------->ICU4<---------YAB1      <---------At4g35610<   agtttcgattatttgatttggtcactgagctcgacactcgacagtgataaagatgaatcctttattatcgcttgaatttttgtagatgatgatgatgatg  25560500                                                                    <-------GAMYB                                                                   --------->MYB111(2)                --------->LBD16                                    <---------MYB46(3)       ------>NtERF2                                               --------->MYB55(2)      --------->bZIP60(1)                                        <---------ANAC58      --------->ANAC58                                           <---------ANAC58      <---------bZIP60(1)                                       <------MYB46(1)    <---------ATERF1(1)                                         <------MYB83   ----------->TGA1                                             <---------MYB46(3)   ----------->HVH21                                          <---------WOX13(1)  <-----------HVH21                                    <---------AHL20(2)                <---------ZAT6 -YAB1--------->ANAC58                       --------->ICU4 --------->ATHB12         <----------DOF2 ---------DEAR3(1)  ---------->DOF2     ----------->GT1<---------YAB1            <---------At4g35610<   cctcggtgacgccaattccgaagaaagcgaaaacttcacaaacagtaagaattgatttttattgattggttgttgtctcattgagctctttgtgttaact  25560600  Previous    Next  AGI:  At1g68185.1    Description:  ubiquitin-related. similar to unknown [Populus trichocarpa] (GB:ABK94492.1); contains InterPro domain Ubiquitin; (InterPro:IPR000626) Range:  from: 25560089    to: 25562185    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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