Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         ------>MYB46(1)                                       ------>MYB83              --------->LBD16         ----------->RAV1(1)            <---------LBD16         --------->MYB46(3)                                              - ----->MYB46(3)                <------ZmHOX2a(1)    <-------TEIL                                    < --->ARR14(2)--------->LBD16======================RAV--------->YAB1          --------->ATHB12-------- ->AGL1 --------->GLK1(1)   <---------LBD16 --------->YAB1<-------TEIL --------->ANAC58 <---------At4g35610 --AGL1 <---------GLK1(1)   <-----------RAV1(2)--------->YAB1          --------->ANAC58 --------->At4g35610   ccattcgaagaattcccggtttgaagaaaaccaggagaaccaacattgatcatattcatattcatccccaagtacggactcattggagtcatctccgaag  25552200                               --------->YAB1                       ----------->HVH21                       ----------->TGA1                     <---------ANAC46                            --------->ATHB12                     <---------ANAC58                           <---------YAB1               <---------AHL20(2)                               <---------AHL20(2)               --------->AHL20(2) --------->YAB1             --------->GLK1(2) -------->ALFIN1     <---------ANAC58                     --------->LBD16         --------->ANAC46 ---------ZAT6--------->AHL20(2) <---------YAB1  --------->GLK1(2) <---------WOX13(1) ->LBD16 ----------->GT1--------->REM1(2)   ---------->DOF2 <---------GLK1(2) --------->AtLEC2   aagtgttagattggaaattaatagcgtgacgactcatcatagaactcaaagaatcgaacccagaatttgattgagtagccatccacataatcgaacacaa  25552300                                                                           <------ZmHOX2a(2)                                                                         <------ZmHOX2a(1)                                                                ----------->GT1                   ---                   --------->TOE2(3)                          --------->CCA1(2)          ----------->GT1                   <----------DOF2                           <---------ARR14(2)         --------->DAG2                   --------->TOE1(3)                         --------->ARR14(2)     --------->HSFB2a(2)          ----------->GT1                                  ----------->ARR10     <----------DOF2-----    --------->AHL20(2)      --------->YAB1          <----------DOF2  ---------->DOF2<---------HSFB2a(2)   acccaaataaaaagattaaaactttaacaattagaaatcaaacccaaaactctcctttgatcagatatgaaaaaaggatcaaactttgagaaggtgaatc  25552400                                                                                           --------->AHL20(2)                                                                                           <---------AHL20(1)              --------->DAG2                                                               <---------AHL20(2)   --------->ANAC58                                                                  <-----------GT1   --------->ANAC58                                                                  --------->YAB1<-   --------->ANAC46                                                               ------>MYB46(1)  --  --------->SPL7         <---------DAG2                                           ------>MYB83<------ ------>At4g35610        <----------DOF2                                        <---------MYB59   <-- ---->YAB1   ---------->DOF2                        ---------->DOF2          <-----------GT1<--------   atcttacgccatggataaagcttggaactttataaaccctaagttaagttctcacaaagaaaccaaaatttgattttgtttaccaaatcacaattttttt  25552500                                                                                               <-----                                                                                               ------                                                                                              -------                                                                                              -------                                                                                              <------                                                                                              <------                                                                                              -------                                                                      --------->ARR11(3)   <---------AHL20(2)                                                          --------->ANAC58                 --------->AHL20(2)                                                          --------->ANAC58            ----------->GT1                                                          --------->ANAC46          <---------ICU4 <----------DOF2                                   --------->ANAC58   <---------ARR11(3)   --------->ICU4 -----------------------ANAC81                     --------->ANAC58  <------ZmHOX2a(1)<---------YAB1 -------->ID1                           --------->At4g35610        <---------TOE2(3)--------->YAB1 ------------------ANAC81               <---------At4g35610 ------------>CBF       <---------ATHB12 ---------GT1          ------>ZmHOX2a(1)--------->ZAT14  *TSS   <---------ATHB12   <---------ATHB51 -AHL20(2)  <-----------GT1             --------->ZAT2--------->CCA1(2)            --------->ICU4<---   tttctttttttttttttctcttgtcctctgtatattagacagagcagccttgtaagctataagccaatgaaggatttttagacaaataatgaaaaaatta  25552600                                                              --------->ATHB51                                                              <---------AHL20(2) <-----------GT1                                              <---------ICU4 ----ICU4                                                    --------->ICU4 -->ATHB1                                                  --------->YAB1 -->AHL20(2)                               <------------CBF<---------ICU4 -->AHL20(1)                     --------->YAB1           --------->AHL20(2) ---AHL20(2)         <-----------GT1   --------->TOE2(3)  <---------AHL20(2) ---YAB1 <---------DAG2        <---------TOE2(3)        --------->TOE2(3)               ----------->GT1 -->ICU4 <----------DOF2      --------->YAB1<---------WOX13(1)--------->AHL20(2)       ----------->GT1 ------YAB1      <----------DOF2<---------YAB1          --------->YAB1----------->RAV1(1)    --------   ttaatacattactttatgacttttcaccatattgatgataaacttaattgaaatctaatattaattattttccaacacaattagttgaaatggaaaaaaa  25552700                                                      ------>ZmHOX2a(1)                                                     --------->TOE2(3)                                             --------->GLK1(2)                                             --------->ARR14(1)                                            <---------GLK1(2)                                            <---------ARR11(3)                       <------ZmHOX2a(1)    --------->ARR14(2)            ---------->DOF2                 --------->ARR11(3)         --------->CCA1(2)          <---------YAB1                    <---------ARR14(2)        <---------ARR11(3)       <---------------AGL15            ---------->DOF2               --------->ARR11(3)     <------- ->AHL20(2)--------->YAB1 --------->ALFIN1----------->ARR10         ----------->ARR10   <-------TEIL   tggattttgactataaaagtaagtaggaatggggaattttagaaaagattctcttcctaaattgaagggagagatatgactaagaacatattcatttttt  25552800                                                                     ------>ZmHOX2a(2)                                                                    <------ZmHOX2a(2)                                                                   <---------ARR11(3)                                                            <--------P                                                           <-------GAMYB                                                          <---------MYB46(3)                                                 --------->AHL20(2)--------->ARR14(2)         --------------->AGL15               --------->AHL20(2)    <---------ARR14(2)         <---------------AGL15              <---------AHL20(2)<------MYB83        ----------------->AGL2        <---------ANAC55(2) --------->ATHB12                          <        ----------------->AGL1        ----------->GT1    <---------AtMYB61                   --------        ----------------->AGL3       --------->MYB59   --------->CCA1(2)                     --------   <-----------GT1              --------->AHL20(2)---------->DOF2  --------->ARR11(3)        <------- --AHL20(2)             --------->AHL20(2)  --------->AHL20(2)<------MYB46(1)  ----------->GT1      <   tttttttactaccaaaattagtagaaaaaaataagaaaataggtaaataaataaaagagatggttggcagatcgtggaatttagtaaatagtgcgaatcc  25552900                                                                               <---------------------                                                                              <----------------------    ---------->DOF2                                                          <---------AHL20(2) --------->YAB1                                                             xxxxxxxxxxxxxxxx>smallRNA(i) ---------ATHB51                           <---------AHL20(2)              <---------RVE1(1) ->GLK1(2)                       <---------MYB59                           <---------CCA1(1) ->ARR14(2)                     --------->ANAC46                          <---------GLK1(2) --ARR14(2)            <----------DOF2<---------DAG2---------->DOF2       --------->ARR11(3)        - ---------ATHB12   <----------DOF2    <----------DOF2--------->DAG2       <---------ARR11(3)       --   caataataaagcatttgatgcctttctttcttctacctcactttttttattccaaaaagttttatcaagtagacaagattttttttttttttttttgttt  25553000   <---------ICU4   --------->YAB1                                                                                  --  <---------ATHB12<---------bZIP60(1)      --------->CCA1(2)              --------->TOE2(3) ---------  --------->ICU4  --------->bZIP60(1)     <---------ARR11(3)              --------->YAB1    --------- ---ANAC81     ----------->HVH21  <---------ARR11(3)      --------->YAB1 <---------YAB1     --------- --ANAC81    --------->ALFIN1     --------->ARR11(3)     <-------TEIL<----------DOF2    <---------AHL20(2) -------->YAB1<-----------HVH21  <---------GLK1(2)------->TEIL    <-----------GT1       --------->AHL20(2) ------------->AGL15   ------>ZmHOX2a(1)  --------->ARR11(3)    <---------AHL20(2)     --------->AHL20(2)   tctaataatgtcaatgtgtgacatcctcgttgtcaaaatctcaagatatatgaatttgattcatattttttctttatgttaatacaaaaattaatcttag  25553100  Previous    Next  AGI:  At1g68160.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G10820.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G10820.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO15416.1) Range:  from: 25549471    to: 25552557    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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