Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          --------->MYB46(3)       --------->ANAC58   ------>ZmHOX2a(2)  <---------At4g35610 ----ANAC58                                       --------->TOE2(3) ----ANAC58        <---------------AGL15    --------->ZAT6 ----ANAC46        --------------->AGL15  <-----------GT1 -TEIL --------->ANAC58             --------->YAB1<---------DAG2                                 ---- --ANAC46          <----------DOF2  <---------ICU4<---------MYB59                           --------- -RAV1(1)    <----------DOF2       <---------ATHB12           --------->CCA1(2)       --------->ANAC46   tttgatctcacccatctttttctttattcagtattcaatctttataactctaccttattcgaagagatgaattcatctagctataaacacatcagtgaca  25547200                                                                                              <------NtERF2                      --------->MYB52(2)                                                     <-------                   <-------MYC2                                                              --------                   ------->MYC2                                                              --------                   ------->MYC3                                                              ------>NtERF2                   <-------MYC3                                                   --------->ARR14(2)                <---------ALFIN1                                                  <---------ARR14(2)           --------->ARR11(3)                                                   --------->DEAR3(1)           <-----------ARR10                                             <---------HSFB2a(1)<--------           <---------ARR11(3)                                            --------->HSFC1(2) <--------          --------->CCA1(1)                                              <---------HSFC1(2)--------->RAP2.6(3)      --------->AHL20(2)                            ------>MYB83         --------->HSFB2a(1)--------- ------->GT1   <---------REM1(2)                    ------>MYB46(1) XXXXXXXXXXXXXXXXXXXX>MIR779.2 -->HVH21 --------->RVE1(1)                    <-----------GT1     <---------ANAC46    ---------->DOF2   agtttaaaaaaaatatctacacgttcgatggtcttctgtatttcacatggtaccatccatgtgaatgtgatgggaaatttcgcagaccctaatgccggcc  25547300                                                            --------->TOE2(3)                                                          --------->ARR11(3)                                                          <---------ARR11(3)                                                    <---------MYB59                                                    ------>ZmHOX2a(2)                                                   <------ZmHOX2a(2)                                                  <---------ARR14(2)                                                  <---------AGP1                                                  <---------ARR11(1)                                                  <-----------ARR10                                                  --------->ARR14(2)      --------->ARR14(2)                          <---------ARR11(3) --RAP2.6(3)                                     <---------ARR14(1) ->ANAC46                                        <---------CCA1(2) ->LBD16 <-----------GT1                        --------->LBD16       --------->ANAC55(2) -ATERF1(2)                                   <---------LBD16         <---------ANAC55(2) -RAP2.6(2)                                  --------->MYB52(1)   <-----------HVH21 >ATERF1(2)             ----------->GT1---------->DOF2   --------->YAB1   ataaactggatttacaaaactaaacaatgtaatacaattttcaaagaaaccggatctaattatcttattgtcacttaataaacaaactatataagagaag  25547400                                      <------MYB83  <---------YAB1              <---------ANAC58                                      ----------->GT1<---------ICU4             <---------ANAC58                          --------->ZAT6     ---------->DOF2              <---------AHL20(2)                  <---------DAG2      <------MYB46(1)--------->ATHB12 --------->LBD16                  <----------DOF2  <------ZmHOX2a(1)--------->ICU4  <---------LBD16 ---------->DOF2 -  <------ZmHOX2a(1)      <---------YAB1    --------->MYB46(3)--------->YAB1  <---------WOX13(1)     <   gggaggaatatatgtatacacttttttatgactactaggatggtaaccaaagtcatgattccatagtaactccggtttaattgcttcaaaggccaaaact  25547500                                                 <---------AHL20(2)                      ----------->GT1          <---------ANAC55(2)                    --------->AHL20(2)               --------->ZAT18          ----------->GT1                        --------->ATHB51                <---------ANAC46          --------->ANAC55(2)                   --------->ICU4                   <---------ANAC58   <----------DOF2                  ----------->GT1                              --------->ANAC55(2)   ==========================================MADS_MADS    ---------->DOF2        <---------ANAC55(2)   --------------->AGL15          ---------->DOF2<---------ICU4 ---------->DOF2  <---------ANAC58 <--   <---------------AGL15     --------------->AGL15   --------->AHL20(2)         <-------TEIL    ----- -------->ARR11(3)           ======================================================================== ---------ARR11(3)           <---------------AGL15   <---------AHL20(2)  <----------DOF2 <---------ZAT6   aagctctttattaagtaacatggattagtttcttcataaagataaaactaattatttaaacaaagtcaaagctagctttagatgcgtactagagtgaata  25547600                                                                                                  <--                --------->GLK1(2)                                                                 ---             --------->ARR11(3)                                                          ----------->ARR10         <---------DOF5.7(2)                                        <----------ID1      <-------TEIL -------------AGL15<---------YAB1                                 ---------->DOF2   <---------TOE2(3) ---->YAB1   <---------ARR11(3)                              ------------------------>ANAC81     ---- =============MADS_MADS         *TSS     <----------DOF2   ---------->DOF2 ---------->DOF2      <----   atacaaatagtaaacgatattctgatcagaaaatgggatttgactttagcacttcaaaatccaaagctaaaagacaaaaaagaatagaggttcgatttgc  25547700                    <----------DOF2                   ------>ZmHOX2a(2)  --------------->AGL15                                                         --------->LBD16  <---------------AGL15                                             ------>ZmHOX2a(2) ----------------->AGL2                                          <------ZmHOX2a(1) <-----------------AGL3                         ---------->DOF2 <---------HSFB2a(1) ----------------->AGL3                    ================================HOX2a_HOX2a -------At4g35610  ===============================HOX2a_HOX2a   <---------HSFC1(2) ------>At4g35610--------->ARR11(3)        <------ZmHOX2a(1)    --------->HSFC1(2)           <------- --->TEIL        <---------ARR11(3)     <------NtERF2      --------->CCA1(2) <---------------------WRI1 -----AtLEC2  <------NtERF2          ------>NtERF2  ---------->DOF2 ----------->GT1     ---------->DOF2   atctccattaatgggcatcgatctttctcttaagctcgaggccgaggagaaaaagaaagagatagaaggatcgaaacatagccgtgagaacaaagaagac  25547800                                                                                               <-----                                                                                  --------->LBD16                                            <----------ID1       <----------DOF2 --------->LBD16              <---------ZAT6           ---------->DOF2      <<<<<<<<<TBF1       --------->TOE1(2) --- ---ID1 <---------YAB1             ----------->GT1   <---------YAB1 <---------TOE2(3)   >>>>>>>>>TBF1   gaagaacatgatgctagtggtgatgaagatgaacaaatggtgaaagaagacgaagatgattcttcttctttaggtttaagaacccgagaagaagaaaacg  25547900                      <---------ARR14(2)                      --------->ARR14(2)                   <---------ANAC46                   <---------ANAC58                  <-------TEIL              ------>MYB46(1)              ------>MYB83      --------------->AtSPL8      <---------------AtSPL8      <---------------AtSPL3                                                                  -------      --------------->AtSPL3      --------->TOE2(3)                                  <---------At4g35610  --------->REM1(2)<---------ANAC58                                                  --------->At4g35610 ----MYB52(2) -------->P        <-------TEIL                                      <------ZmHOX2a(2) ---->TEIL  <---------MYB59 <-------TEIL     <---------AHL20(2)             <---------DEAR3(1)<------   aacgtgaagaggtacctacatgcgtatatatacatacatcaaaacattttatgtgcgaatatatgttaacatctatggatggcgatcagctcttgcagct  25548000           ---------->DOF2    <---------HSFB2a(2)    <-----------RAV1(2)                               --------->At4g35610  <------ZmHOX2a(2)                           <---------ANAC58 --------->ARR14(2)                           <---------ANAC58 <---------ARR14(2)                          <---------HSFC1(2)                     --------->At4g35610 --------->ARR11(3)                          --------->HSFC1(2)                     <---------At4g35610 --------->AGP1                           <------ZmHOX2a(1)               <-----------TGA1      ----- -->At4g35610                <---------ARR14(2)       <---------At4g35610--------->YAB1        ------ ---At4g35610      ---------->DOF2      <---------TOE2(3)           <---------GLK1(2)         <------   acagatccagatggaaagtgtgaaagaagagaatactaggttgaggaagcttgtcgagcagactcttgaagattatcgtcatcttgagatgaaattcccg  25548100  Previous    Next  AGI:  At1g68150.1    Description:  WRKY9 (WRKY DNA-binding protein 9); transcription factor. Identical to Probable WRKY transcription factor 9 (WRKY9) [Arabidopsis Thaliana] (GB:Q9C9F0); similar to WRKY72 (WRKY DNA-binding protein 72), transcription factor [Arabidopsis thaliana] (TAIR:AT5G15130.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43389.1); contains InterPro domain DNA-binding WRKY; (InterPro:IPR003657) Range:  from: 25547632    to: 25549380    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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