Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              <-----------GT1                      --------->ANAC58                      --------->ANAC58                      ----------->GT1                  <<<<<<<<<AtERF-4                  ------>NtERF2------->GAMYB   <------MYB46(1)<---------RAP2.3(1)                                        <---------ZAT14   <------MYB83   <<<<<<<<<AtERF-3                                           --------->ZAT18  --------->MYB59<---------RAP2.3(3)                                         --------->ZAT14 --------ARR14(2)<---------RAP2.3(2)                                   --------->YAB1 ------->ARR11(1)<---------RAP2.6(2)                                <---------ICU4 ------->ARR14(2)<---------DEAR3(1)                                <---------YAB1          <---------MYB52(2) --------GLK1(2)--------->RAP2.6(3)    <---------YAB1              --------->ICU4       <----------ID1 ------->ARR10----------->HVH21--------->TOE2(3)                 --------->YAB1     ---------->DOF2   agatttggtctgaattgtgacggctcgtaataaccccaatttcgattattcaatccatcttcttccatcataatcaaactacactgtaaagaaacaaaca  25530800                                       <---------------AtSPL8                              <----------DOF2                             --------->TOE2(3)                         --------->KAN4(2)                        <---------KAN4(1)                ------->GAMYB                        --------->KAN4(1)                --------->AtMYB61                       ----                       <------ZmHOX2a(2)                --------->MYB46(3)            <---------YAB1                       <---------YAB1  --------------->AtSPL8       >>>>>>>ZML2    --------->GLK1(2)                      --------->ARR11(3)               -------->P   <---------HSFB2a(2)          ----                      <---------ARR11(3)              --------->WOX13(1)          <---------GLK1(2) -                  ---------->DOF2   <---------AHL20(2)<-----------GT1   <-----------GT1          <---                 --------->ICU4 --------->AHL20(2)  <---------ATHB12--------->HSFB2a(2)     ---------   aaaacacacatttttggtcataaagatcattcctttatatatatgtacaatctaatcaaccatctctgttctagtaacattccaaattctgaatcaatcc  25530900                                                                                                   <-                                                                                                <----                                                                                              -------                                                                                              <------                                                                                              <------ ----->HSFB2a(2)                                                                             <------- -->ZmHOX2a(1)                                                                               -------- --------->DOF2                                                     ----------->GT1      <-----------HVH21 ------HSFB2a(2)                     <-----------GT1      --------->MYB46(3)    <-----------------AGL1 >WOX13(1)  <----------DOF2     <----------DOF2        <------ZmHOX2a(1)    --------->YAB1  ---------   tcgaaagaacacaactttgtaaatgggtttatgtctttttaacaaaatcgaagtctaggaaccaatgtaagagttaaaacataacaaaattggtcagatt  25531000                                                                                       ----------->GT1                                                                                  <---------YAB1                                                                               --------->TGA2(2)                                                                              <-----------TGA1                                                                             --------->ANAC55(1)                                                                             --------->ANAC46      <---------TOE2(3)                                                      --------->ANAC58      <---------TOE1(3)                                                      --------->ANAC58 --------MYB52(1)                                                           <-----------STF1 ---TEIL                                                                    <-------TEIL -->ARR14(2)                                                             --------->CCA1(2) ---ARR14(2)                          --------->ICU4                    <---------ARR11(3) ---GLK1(2)                    --------->HSFB2a(2)                      <---------ARR14(2) --At4g35610                   <---------HSFB2a(2)                      --------->ARR14(2) ->At4g35610        ----------->HVH21 <---------ATHB12         --------->ZAT6--------->ANAC55(2) -->ARR10       <---------GLK1(1)--------->ANAC46  <------ZmHOX2a(1)    --------->ARR11(3)   --------   cgtttattagggttttcgaaatctgacatttttctaggcaatgaagaaacagaggaataaatgtaacagtagaagatatacgtcatcaatggagaaaaag  25531100                                                                             <---------ANAC58                                                          ----------->GT1    <---------ANAC58                        <----------DOF2                   <------MYB83 <----------DOF2                <---------ANAC55(2)                    <------ZmHOX2a(1)     <---------ANAC46                --------->ANAC58                       ======================HOX2a_HOX2a                --------->ANAC55(2)              <---------At5g28300  ------>ZmHOX2a(2)                --------->ANAC46                 -------->P         <---------ARR11(3)           *TSS                --------->ANAC58          <------ZmHOX2a(1)    <---------ARR14(2)         <----------DOF2             <---------ARR14(2)           ===================================HOX2a_HOX2a <---------DAG2     <---------------AtSPL8 <---------TOE2(3)   --------->MYB52(1)  --------->ARR11(3)<-----------GT1 -->DOF2     --------->ARR14(2)          ----------->GT1  <------MYB46(1) <------------------------ANAC81   agaagtaagagtacaaatacgaaatactttaagaaatggagagaggaaacttaccgaggatggtgaattcgatctttttgtgtgttttttgccttttgag  25531200                                                                                          <---------TOE2(3)                                                                                          <---------YAB1                                                                                         <---------AHL20(2)                                                                                         --------->YAB1                                                                                         --------->AHL20(2)                                                                                       <---------YAB1              --------->ALFIN1                                                --------->AHL20(2)           <---------DEAR3(1)                                                 --------->AHL20(1)          --------->SPL7                                                     --------->YAB1        ----------->HVH21                                          <---------YAB1    --------------->AGL15    --------->DAG2                --------->ICU4                  <---------AHL20(1)<---------YAB1   ---------->DOF2              ---------->DOF2              <---------AHL20(2)   --------->ZAT6  --------->CCA1(2)       ----------->GT1     <-----------GT1--------->AHL20(2) --------->YAB1   agagataaaggggacggtggaagatagatggtagaaaagatgagttttatactattttagtattttaatatgtttgcaaaaataatactattaatattac  25531300                    --------->ICU4                    <---------YAB1                   --------->TOE2(3)                  --------->YAB1                  <---------ICU4                                        --------->TOE1(2)                <-----------GT1                                       <---------------AtSPL8       ----------->GT1                                               ---------->DOF2 <---------AHL20(2)       <---------ANAC55(2)          ---------->DOF2                <---------YAB1--------->ICU4       --------->ANAC58           --------->ANAC58                 <---------ANAC55(2)<---------AHL20(2)       --------->ANAC46           --------->ANAC58                 --------->ANAC58  --------->AHL20(2)       --------->ANAC55(1)        <---------ANAC55(2)              --------->ANAC58 <---------YAB1       --------->ANAC58<---------YAB1        <-----------GT1 <-------TEIL        <---------YAB1       --------->ANAC55(2)        <---------YAB1        --------->AHL20(2)    ------->TEIL          -   agcaaaaacaagtaatataaacattattaatgcattacgaaagtatttcaccaaaaaaaaaaatgcattacgaaagtacgaacattattaattcaaattg  25531400                   --------->AHL20(1)                   <---------AHL20(2)                   --------->AHL20(2)            --------->LBD16           ----------->GT1           <---------ANAC55(2)           <---------ANAC58           --------->ANAC55(2)           <---------ANAC58                                           <-------TEIL           <---------ANAC46                 <-----------GT1      --------->AHL20(2)     --------->AHL20(2) ---------->HVH21 --------->AHL20(2)  ----------->GT1          <---------TOE2(3)        <---------AHL20(2)   tggtgacaaaattccgtaaaaaaaattgtttcgacaaattttgtaattacattcaaaaatgcgttaagaaaatacattggtagccaaaatttatattgtt  25531500                                                                                           --------->YAB1                                                                                       --------->AHL20(2)                                                                                       <---------AHL20(2)                                                           <---------AHL20(2)          <---------AHL20(1)                     --------->YAB1                        --------->AHL20(2)          --------->AHL20(1)                    <---------ATHB12                      <---------AHL20(2)       --------->AHL20(2)                    <<<<<<<<<ARR2        <-------TEIL     --------->AHL20(2)       <---------AHL20(2)               <-----------GT1      --------->AHL20(2)    --------->AHL20(1)      --------->AHL20(2)<               --------->YAB1     <---------TOE2(3)       <---------AHL20(1)  <---------ATHB12      -   tcgacaaatttttgtaattacaatcaaaaatgcgttaagaaaatacattggtagccaaaatttaatttttcgattagcaaatcatttattttattagaac  25531600                                                                        <-------GAMYB                                           --------->AHL20(1)        <---------At4g35610                                           <---------AHL20(1)   <------MYB46(1)                                           <---------AHL20(2)   <---------MYB46(3)                                 --------->CCA1(2)              <------MYB83                      --------->AHL20(2)  --------->YAB1<---------GLK1(2)                     <------ ---------AHL20(2)   <---------AHL20(2)   --------->AHL20(2)<-----------RAV1(1)   <---------YAB1 -------->AHL20(2)   --------->AHL20(2)   <---------AHL20(2)<---------YAB1  <---------YAB1    -------   aataaaatcgatggtcttaaaaaataaataagaagataagaaaattatattcttactagattatgttggtttgctgttgtaattgtcatttctcactgta  25531700  Previous    Next  AGI:  At1g68120.1    Description:  ATBPC3/BBR/BPC3/BPC3 (BASIC PENTACYSTEINE 3); DNA binding / transcription factor. similar to BPC2 (BASIC PENTACYSTEINE 2) [Arabidopsis thaliana] (TAIR:AT1G14685.2); similar to BPC2 (BASIC PENTACYSTEINE 2) [Arabidopsis thaliana] (TAIR:AT1G14685.1); similar to BPC2 (BASIC PENTACYSTEINE 2) [Arabidopsis thaliana] (TAIR:AT1G14685.3); similar to unknown [Populus trichocarpa] (GB:ABK92855.1); contains InterPro domain GAGA binding-like (InterPro:IPR010409) Range:  from: 25529878    to: 25531197    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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