Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            --------->ATHB12         <---------MYB52(1)        <-----------HVH21        <-----------TGA1                                               ----------->GT1        <---------RAP2.6(3)                                          <------------CBF      --------->DEAR3(2)                                           --------->ARR11(3)      <-----------------AGL1                                       <---------ARR14(3)     <---------At5g28300                                           --------->ARR14(3)  <---------HSFB2a(1)                                              <---------ARR11(3)  --------->HSFB2a(1)                                              --------->ARR14(2)  --------->HSFC1(2)                                        --------->LBD16  <---------HSFC1(2)                               ---------->DOF2 <---------ARR14(2) <---------------AtSPL3                 <----------DOF2 --------->GLK1(2)                         <-- <---------------AtSPL8  <-----------RAV1(1)    ------>ZmHOX2a(1)----------->ARR10            <------ ---ZmHOX2a(1)       <---------YAB1  <-----------GT1   <---------GLK1(2)               <----------DOF2   gagaaggtaccgtcattggtattttcattgttgccattttttctttcttcctctaaagattccgaagaagatattgtaaaactctatacctttcttcttt  25524500                                                    <---------ANAC58                                                    <---------ANAC58                                                    ----------->GT1                                                    <---------ANAC46                                                  <---------ANAC46                                                  <---------ANAC58                                                  <---------ANAC58                                                 <---------AtMYB61                                               <---------ANAC46                                             <------MYB83  <-----------RAV1(1)<-------GAMYB       ---------->ID1                       <---------AtMYB61     <-------GAMYB     <-----------RAV1(1)                 <-----------RAV1(1)      <------------CBF --------DOF2                    <----------DOF2 --------->ALFIN1<---------MYB46(3)       ---------->DOF2 ----DOF2                     <-----------GT1<------MYB46(1)    <---------ANAC46----------->GT1   cttttttttgttgtattctcttgattttgttttttcttttgttttgttggtgtggtgtgatttgtggcgattgggttttgggttgaaatatgcaaaggaa  25524600                                                                                                   --                                           <---------ANAC46                                       <--                                           <---------ANAC58                                      <---                                ------>ZmHOX2a(1)                      <---------AHL20(2)        ----                            <---------ARR14(2)        <---------MYB46(3)                      <------                     <------ZmHOX2a(1)     <---------ANAC58 <----------DOF2  --------->MYB52(1) <----        --------->ARR11(3)  --------->ARR14(2)    --------->ICU4      --------->AHL20(2)     <-------   atggacattagaccttgattttaggagttgaatcctctgtttcattcgtgtaacgatggatgctttgatgcataaaatttaacggataacattttttagg  25524700        --------->ARR11(3)       --------->RVE1(1)       <---------GLK1(1)       --------->CCA1(1)       --------->GLK1(1)      <---------ARR11(3)      --------->ARR11(3)         ----------->RAV1(1)  <---------MYB52(1)         --------->YAB1 ---->ZmHOX2a(2)            <---------YAB1 ----ZmHOX2a(2)          <---------YAB1                    <---------ZAT14 ------ARR14(2)        <---------ICU4                      --------->ZAT14 ----->ARR14(2)       --------->ICU4                      <---------ANAC46 ---TOE2(3)           <---------YAB1           --------->YAB1 --ZmHOX2a(1)       --------->YAB1    ---------->DOF2   <---------ANAC46         --------->DAG2 ----GT1<---------ARR11(3)--------->YAB1    <----------DOF2--------->REM1(2)   ---------->DOF2   atccgatagatatctctatgtttcatgattatcatcaacataaagacttttataagagttgtgtagagtctgtagcctagtaaaagggggttttcgactt  25524800                                       ------>ZmHOX2a(2)                                      --------->GLK1(1)                                      <---------GLK1(1)                                      <------ZmHOX2a(2)     <---------------AGL15                                     <---------ARR14(3)    <-----------------AG                                     <---------ARR14(2)    <-----------------AGL1                                     <---------ARR11(3)    <-----------------AGL2                                     --------->ARR14(2)    ----------------->AGL2                                     --------->ARR11(3) <----------DOF2                                     --------->ARR14(3)<---------ANAC58                                 ---------->DOF2       <---------ANAC58                   <---------YAB1                              <---------YAB1 <---------TOE2(3)           <---------bZIP60(1)                    <----------ID1  --------->RVE1(1)<-----------GT1 ------->TEIL       --------->YAB1            <----------ID1    ----------->TBP<---------TOE1(3)     *TSS  --------->bZIP60(1)        -      ------------>CBF      --------->AHL20(2)----------->GT1--------->LBD16   <----------DOF2-------     <<<<<<<<<<<<<<<<<LFY   --------->YAB1 ------>ZmHOX2a(1)--------------->AGL15<---------LBD16   --   aatttcgaaacaatgggccaaaactacaaattataaaaagatctcctaaggtttattactttccccaaatggatgttgtcactttcggaatcataatcgg  25524900                                                                          --------->ZAT18                                                                          <---------ZAT18                                                          ------->GAMYB --------->At4g35610   --------->YAB1                           <---------ZAT18             <---------At4g35610  <---------YAB1                            --------->ZAT18<-----------HVH21 <-----------GT1                   <---------YAB1         --------->DEAR3(1) -------->YAB1                --------->REM1(1)          --------->DEAR3(2) -->YAB1                  <---------At4g35610            <------------AtMYB77           <---------ANAC58 ------->ICU4             --------->At4g35610            --------->MYB46(3)             <---------ANAC58   aattatcattctcttcttctgcatcgtctgcttcatcactattgaaggcactcgcttcaaccgtcgctcttcttagctcactcagagatgtcgttctcgc  25525000                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                                               ------                                                                                     ----------->HVH21                                                                                   <------NtERF2                                                                                   --------->ANAC55(2)                                                                                   <---------ANAC55(2)                                                                                   --------->TGA1a                                                                                   ==================                                                                                   <---------TGA1a                                                                                   <---------ANAC58                                                                                   <---------ANAC58                                                                                  ------>NtERF2<-----                                                                                 <---------ANAC46                                                                                <------NtERF2  <-----                                                                                --------->ATERF1(1)                                                                               <---------ERF1  <-----                                                                               <---------ATERF1(1)                                                                               <---------RAP2.3(1)                                                                               <---------DEAR4(2)                                                                               <---------ORA47(2)                                                                               <---------RAP2.6(1)                                                                              --------->DEAR3(1)                                                                              <---------RAP2.3(3)                                                                              <---------DEAR3(1)                                                                              --------->ATERF1(2)                                                                              <---------ATERF1(2)                                                                             <---------LBD16   ------                                                                             --------->ATERF1(1)                                                                            =========================                                                  ===========================================MYC_MYB                           <---------------AtSPL8 <-------GAMYB             =================MYC_MYB                           <---------------AtSPL3<---------ANAC58           ------->GAMYB     -------                  <---------ARR14(2)             <---------ANAC58       <---------WRKY12      <------                  --------->GLK1(2)         ------>ZmHOX2a(2)           <---------WRKY38(1)   <------                  --------->ARR14(2)      <---------ARR14(2)           --------->WRKY18(1)    <------                 <---------ARR14(2)       <---------AGP1              <-----------HVH21       <------              <-----------------AGL2   <---------HSFB2a(2)   <---------ARR14(2)------>NtERF2  <------              <-----------------AGL1   --------->HSFB2a(2) --------->LBD16 --------->DEAR3(1) -------            <---------ARR14(2)  <-----------------AGL3   <---------LBD16<---------WRKY45  <----------            --------->ARR14(2)  <-----------------AGL2 <---------ARR14(2)  --------->ANAC46<------ZmHOX2a(2)   --------->ANAC58 <-----------------AGL1<---------ARR11(3) --------->ARR14(2)<---------DEAR3(2)   --------->ANAC58 <-----------------AGL2--------->ARR14(2) <---------GLK1(2)<---------RAP2.3(2)<--- ---------->DOF2 <---------GLK1(2)    <---------LBD16  --------->ARR14(2)<---------DOF5.7(2) --------   tgagaaagctactggttccgattctggttttggtactgtttctggatctgtgcgttgaatccggattctctcagtcaacgccggcgcgtgacgatcacgt  25525100 <---------ICU4 --------->YAB1 ->MYC2 ->MYC3          <---------ZAT14 --PIF4          --------->ZAT14 ->PIF4         <---------REM1(1) --MYC3         --------->ALFIN1 ->MYC4       <---------ANAC58 ===bZIP_bZIP <------MYB83 --MYC2       <---------ANAC46                                 <---------ANAC55(2) --MYC4       <---------ANAC58                               <---------ICU4 --PIF5      --------->MYB111(2)                         <---------YAB1 ->PIF5      <---------DEAR3(1)                         --------->ARR11(3) ===MYC_MYB <---------MYB55(1)                          <---------ARR11(3) -->ANAC55(2)--------->MYB55(2)                        --------->YAB1 ---ANAC55(2)<---------MYB46(3)                       --------->ICU4                      <---------At4g35610 ---ANAC58  --------->ALFIN1                          <---------YAB1                      --------->At4g35610 ---ANAC46  <---------ANAC46                       <------ZmHOX2a(2)                  --------->ALFIN1 ---TGA1a --------->MYB55(2)                      --------->ARR11(3)               <---------AtMYB61 ---ANAC58<---------MYB46(3)                      <---------ARR11(3)           <------NtERF2 -->TGA1a<---------DEAR3(1)               --------->ANAC58--------->YAB1      ------>NtERF2 -HVH21  --------->ALFIN1           --------->ANAC58<---------ICU4           <---------DEAR3(1) ----TEIL<---------AtMYB61  --------->YAB1--------->ANAC58<---------ICU4    --------->ATERF1(1) ---->OsbHLH66<------MYB46(1)       --------->ANAC58--------->YAB1         <---------ATERF1(1)      <   gcatcatcacggtggtgggtgtagtcattctcatgaccacgaccacgaccacgatcatgatcatcatgtgaagaagacgacggcgaaggtggagatgaag  25525200            --------->At4g35610     <-----------RAV1(1)         <---------ANAC58           <---------ANAC46                   --------->ANAC58            <-         <---------ANAC58 --------->CCA1(2)                            --------->ANAC58            --        --------->At4g35610      --------->GLK1(2)          <---------ICU4                        ---        --------->ZAT2    <---------GLK1(1)                <---------YAB1          <---------ALFIN1<-      <------ZmHOX2a(1)  --------->ARR14(2)                --------->ICU4       --------->ARR14(2)---   <------NtERF2         <---------ARR14(2)          ---------->ID1    <---------ANAC55(2)  ---------  --------->LBD16       <------ZmHOX2a(1)        <---------ANAC58      --------->ANAC55(2) <---------ANAC46 ---------LBD16      <------ZmHOX2a(1)           <---------ANAC58   <------ZmHOX2a(2)     <---------LBD16   ttgccggaggagcttgctgaagaggaggatatgagattatgtgggtttgggccttgtcttcatgatcacgatcacgaatcaagttccactcttacggggt  25525300                                                         <---------ICU4                                                         --------->ATHB12                                                        <---------YAB1                                                   <---------ANAC58                                                   --------->ANAC55(2)        <------MYB46(1)                            <---------ANAC55(2)        <------MYB83                               <---------ANAC58 -----MYB83          <-------TEIL             <---------ICU4                    <---------MYB46(3) --------->GT1    <---------At4g35610         --------->ATHB12                  <------MYB83       <- ------>MYB59  <---------MYB52(1)             --------->YAB1                  <--------P      <------ -----MYB46(1)<----------DOF2                --------->ICU4     --------->GLK1(2)          <---------AGP1 ------>MYB46(2)  --------->At4g35610  <-----------GT1  --------->ICU4      <-----------RAV1(1)    <- >LBD16--------->MYB59       --------->ATHB12<---------ATHB12  <---------GLK1(2)<------MYB46(1)    <-   ttggtaaatttggttcctttagctacattcttcattgggttttacaaatcattacttgatgattagaatctcttcttcttgttggtttttgtagctctgt  25525400  Previous    Next  AGI:  At1g68090.1    Description:  ANN5/ANNAT5 (ANNEXIN ARABIDOPSIS 5); calcium ion binding / calcium-dependent phospholipid binding. Identical to Annexin D5 (ANN5) [Arabidopsis Thaliana] (GB:Q9C9X3;GB:A0MEF1;GB:Q1PFF4;GB:Q9C5V4); similar to ANN7/ANNAT7 (ANNEXIN ARABIDOPSIS 7), calcium ion binding / calcium-dependent phospholipid binding [Arabidopsis thaliana] (TAIR:AT5G10230.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42414.1); contains InterPro domain Annexin like protein (InterPro:IPR015472); contains InterPro domain Annexin; (InterPro:IPR001464) Range:  from: 25523105    to: 25524437    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g68100.1    Description:  IAR1 (IAA-ALANINE RESISTANT 1); metal ion transmembrane transporter. Identical to IAA-alanine resistance protein 1 precursor (IAR1) [Arabidopsis Thaliana] (GB:Q9M647;GB:Q8H9F6;GB:Q8VYF8;GB:Q9C9X4); similar to unnamed protein product [Vitis vinifera] (GB:CAO42418.1); contains domain PTHR16950:SF2 (PTHR16950:SF2); contains domain PTHR16950 (PTHR16950) Range:  from: 25524867    to: 25527838    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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