Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        -------->ATHB1              <------MYB46(1)                      <---------ICU4              <------MYB83                      --------->ATHB12           --------->MYB111(1)                     <---------ATHB12            --------->MYB59                     <---------YAB1              --------------->AtSPL8                     --------->ICU4              --------->MYB46(2)                  <------ZmHOX2a(1)              <---------------AtSPL8                  ------------>ATHB5             <---------AtMYB61         <---------TOE1(3)                       <---------MYB46(3)                            <-----         <---------TOE2(3) <---------ANAC58 <---------TOE2(3)                      --------->ANAC58 -->ZmHOX2a(1)<------MYB46(1)           <----------DOF2                            --------->ANAC46 >HSFB2a(1)   <------MYB83 <---------ANAC58 <---------TOE1(3)                      --------->ANAC58 >HSFC1(2)   --------->ALFIN1           <---------DAG2                           --------->HSFB2a(2) -HSFC1(2)   --------->MYB111(2)--------->HSFB2a(2)                              <---------HSFB2a(2) -HSFB2a(1) <--------P--------->YAB1 <---------ALFIN1                         <---------ARR14(2)   ttaagttagtgaaggttggaggaatcattgccttcgacaacactttatggtttggtactctaattcagaaggaaaacgaagttccaggccatatgagagc  25494300                                             ------>ZmHOX2a(1)                                          <------ZmHOX2a(2)                                         --------->ARR11(3)                                         <---------ARR11(3)                                         --------->ARR14(2)                                         <---------ARR14(3)                                         <---------ARR14(2)                                         --------->ARR14(3)                             --------->CCA1(2)                            <---------ARR11(3)                                                   ----                            <---------AHL20(1)                                                   <---                            --------->AHL20(1)                                              ---------           <----------DOF2  --------->ARR11(3)                                        --------->ANAC58           <---------DAG2 ----------->ARR10------>ZmHOX2a(2)                          --------->ANAC58 ----At4g35610   <---------ZAT6      <---------LBD16             --------->GLK1(1)    --------->ANAC46   ttatagagaggcacttttagagttcaataagatattggctcgggatcctcgagtcgaaatcgctcaaatatccatcggagatggtctcacgctatgtaga  25494400       --------->YAB1      ----------->GT1              <----------DOF2      <---------YAB1      <---------TOE2(3)<---------ICU4 ----->O2               <---------AHL20(2) --------->YAB1                          --------->YAB1 ------O2         --------->YAB1          <---------ATHB51                      --------->YAB1 <----- >REM1(2)         ----------->GT1         <---------ATHB12         ----------->GT1 <---------ICU4   cgtcttatatgataaacctatagtaaataatgttatatgcttcaataataactttggcctttgtttgtaatgttatatgctactataatgactcttcatc  25494500                                                                                <------NtERF2                                                                               --------->LBD16                                                                              <---------RAP2.6(2)             ------>ZmHOX2a(1)                                            <----------DOF2      ------     --------->AHL20(2)                  <-------TEIL                  <-----------GT1      <--------     <---------AHL20(2)               ----------->GT1          <------------MYB.PH3(1)----------->GT1 ------>ZmHOX2a(1)                   <---------------AtSPL8  <-----------GT1 --------->RAP2.6(3) ----At4g35610 <----------DOF2  ---------->DOF2          ---------->TaMYB80  <---------LBD16<--------   ttcctaataaaactcctctttcaatttcaatttgcaaagagggttcaaatttggatgcgaatataacagtttattactttgcggcaaaatgtttataatt  25494600                           <---------TOE2(3)                                              -----------                          ---------->DOF2                                                 <----------                     <---------AHL20(2)                                 <---------YAB1   ------------                <---------WOX13(1)                                <---------AHL20(2)    ------>NtERF2    <----------DOF2  --------->AHL20(2)                  --------->ARR11(3)          --------->ZAT2 - --->ICU4      <------------CBF--------->CCA1(2)        <---------GLK1(1)            --------->At4g35610 -YAB1     <-------GAMYB --------->AHL20(2)             --------->GLK1(1)    *TSS ---------->DOF2<--- -AHL20(2)----------->GT1<---------AHL20(2)         --------->YAB1--------->AHL20(2) <---------At4g35610   tttaaactttgagggttaattgataaattaaagataaacatcgacatttctaaatcagaaatctcgattttattttgaatgttcaaaagctgccagattg  25494700         --------->SPL7      <---------ANAC58                <---------ARR14(2)      <---------ANAC58                <-----------ARR10 ---->AGL15                           <---------ARR11(1) -----AGL15                           --------->ARR14(2) ----->AGL1  <---------MYB46(3)       ------->TEIL   <---------TOE1(3)               <-----------GT1 -------->GLK1(2)                     --------->GLK1(2)                          <----------DOF2 ------TOE2(3)<-------GAMYB          <---------ARR14(1)                     <---------At4g35610   agaatatttcgtccgtcgttgaaacttgagaatagaggcgaatctggttcgagttagggttccaattgaaaagtttgaagctccttttgactctctctct  25494800        <---------ETT(2)      ------>ZmHOX2a(2)     <------ZmHOX2a(2)                                                                      <--------    --------->ARR11(3)                                                                      <--------    <---------ARR11(3)                                                                      <--------    <---------AGP1                                                                          ---------    --------->ARR14(2)                                                                     <-------TEIL    <---------ARR14(2)                  <-----------GT1                          <---------LBD16   <---------CCA1(2)            <------MYB83                                     --------->LBD16 --------->HSFB2a(2)            ----------->GT1                                 <---------ANAC46 <---------HSFB2a(2)            <------MYB46(1)                                 <---------LBD16 --------->HSFC1(1)            --------->MYB59 <----------DOF2     ------->TEIL<---------LBD16   cttctagatctcgacaactctaacctcttcgatttggtaaattttcgctctttctactgaaatcggatgaatttgtgattttccggggatgggttcgtgt  25494900                                                                       --------->ARR11(3)                                                                       <---------ARR11(3)                                                                       <---------AGP1                                                                       <---------ARR14(2)                                                                       --------->ARR14(2)                                                                      <---------CCA1(2)                                                                    --------->ALFIN1                                                                 <---------AtMYB61                                                                 --------->MYB111(1)                                                            <---------ANAC46     ------->TEIL       <---------YAB1                    <----------DOF2 -ANAC58       --------->ATHB12                          <---------ANAC58 -ANAC58      <---------ATHB12---------->DOF2            <---------ANAC58------>ZmHOX2a(2)        <-- -ANAC46      ----------->HVH21                     <---------ICU4<------MYB83                    --- >MYB52(2)  <---------At4g35610--------->DAG2   <---------AHL20(2)<------MYB46(1)              ------   ctctatgcattttccgatgatgggttatgagaaaaagtttttttttttttttaatctttgctttgtgtaggtggatcttgagaaattgattttagttcaa  25495000                                                                           <------MYB46(1)                                                              ------>MYB46(1)                                                              ------>MYB83--------->MYB55(2)                                                            <---------MYB59<------MYB83                                                           --------->ANAC55(2)                                                         <-----------GT1  <---------MYB46(3)                                                     --------->AHL20(2)<---------MYB46(3)                                                   <----------DOF2     <------MYB46(1)                                                <---------ARR11(3)     <------MYB83   <---------YAB1                               <---------ARR14(2)    <---------AtMYB61        <----- -------HSFC1(2)                                ------->TEIL<---------MYB111(1)<----------DOF2 <----- ------>HSFC1(2)              --------->TOE1(2) --------->ARR14(2) <-----------RAV1(1)   <----------DOF2 ---->DOF2   ---------->DOF2<---------AGP1     <---------CCA1(2)  <---------YAB1    <-----------GT1   agcttctgatggctaaaaaggagagacctagacctgagaagttgtctgtgtatctttatatacctaatattgttggtgggtctttatttctctttagctt  25495100                                                         --------->ARR14(2)                                                <----------DOF2                                          --------->ATHB12                                   <-------                                     <---------AHL20(2)  ---------->TaMYB80                <---------ANAC46                                <---------YAB1 <---------ANAC58                      <----------DOF2                                --------->ICU4 <---------ANAC58                     <---------ANAC46                             --------->ICU4<---------ANAC58                         <---------ANAC58                <---------GLK1(2)    --------->AHL20(2)  <---------ARR14(2)         <---------ANAC58 -----DOF2   <---------TOE2(3)--------->YAB1<---------WOX13(1)                 --------->ALFIN1 ----DAG2   ---------->DOF2  <---------YAB1<---------ANAC58                    <-----------RAV1(1)   ttttttcttagcattaaagattgttgttgtgatgatgattttattgattgctttcagggtatatgagagttctcttgaactgtgttgcttttgctgtgtg  25495200  Previous    Next  AGI:  At1g67990.1    Description:  caffeoyl-CoA 3-O-methyltransferase, putative. Identical to Probable caffeoyl-CoA O-methyltransferase At1g67990 [Arabidopsis Thaliana] (GB:Q9C9W4;GB:Q0V808;GB:Q8L5T6); similar to CCoAMT (caffeoyl-CoA 3-O-methyltransferase), caffeoyl-CoA O-methyltransferase [Arabidopsis thaliana] (TAIR:AT1G67980.1); similar to unknown [Populus trichocarpa] (GB:ABK94201.1); contains domain SSF53335 (SSF53335) Range:  from: 25493118    to: 25494530    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g68000.1    Description:  ATPIS1 (Arabidopsis thaliana phosphatidylinositol synthase 1); CDP-diacylglycerol-inositol 3-phosphatidyltransferase. Identical to CDP-diacylglycerol--inositol 3-phosphatidyltransferase 1 (PIS1) [Arabidopsis Thaliana] (GB:Q8LBA6;GB:O81846); similar to PIS2 (PROBABLE CDP-DIACYLGLYCEROL--INOSITOL 3-PHOSPHATIDYLTRANSFERASE 2), phosphotransferase, for other substituted phosphate groups [Arabidopsis thaliana] (TAIR:AT4G38570.1); similar to phosphatidylinositol synthase [Brassica napus] (GB:AAM77369.1); contains InterPro domain CDP-alcohol phosphatidyltransferase; (InterPro:IPR000462); contains InterPro domain CDP-diacylglycerol-inositol 3-phospha Range:  from: 25494677    to: 25496716    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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