Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100     --------->ATHB12   --------->YAB1                                                                                  --   <--------HAHB4                                                                                  --   <---------ICU4                        --------->TOE2(3)                                         <-  <---------YAB1                         <----------DOF2                                           --  --------->ICU4                         --------->TOE1(3)           --------->YAB1                <-  <---------ATHB12                  --------->At4g35610             <---------YAB1                 -- ------At4g35610             <---------TOE2(3)                      --------->ICU4                 == ---->DEAR3(1)               <---------YAB1                       --------->YAB1                   -- --ALFIN1              <---------YAB1  ------>NtERF2              <---------ICU4                   -- ->AtMYB61        --------->ZAT6    <---------At4g35610          --------->ICU4                    -- >MYB46(3)    <---------ATHB12      ------>ZmHOX2a(1)       ------->TEIL                           <-   gctcatcattactcccatcaacactaccattaacattcctctgccttaactcaccaaaattgaacccattatgatgaacagtttgcccatctaatagagt  25487500              --------->AtMYB61             --------->MYB46(3)           <---------ALFIN1          --------->MYB46(3)        ------->GAMYB        --------->AtMYB61       --------->MYB46(3)       <---------MYB55(2)           ----------->RAV1(1) ------->TGA1a--------->ZAT6       --------->AtMYB61 ------->ANAC58                    <---------ALFIN1 --------TGA1a<---------ALFIN1    --------->MYB46(3) ------->ANAC58                 --------->DEAR3(1) --------bZIP60(1)              <---------ALFIN1 ------->ANAC46                 --------->AtMYB61 ===============MYC_MYB        --------->MYB46(3) ------->bZIP60(1)     --------->AtMYB61 ------->O2--------->DEAR3(1)--------->AtMYB61 ------->bZIP60(2)     --------->ZAT6    --------->YAB1                                  <---------ALFIN1 --------O2--------->AtMYB61--------->MYB46(3)                 --------->YAB1         <-----------GT1   cacgacacaaccaccaccactactaccactaccaccaccaccatagtaattcaatctgttctcaaacatcgttgtagtctctccaaaatcaccacttgaa  25487600                    <---------ARR14(2)                                                      <--------                    --------->GLK1(2)                                                       ---------                    <-----------ARR10                                                      --------->ANAC46                --------->YAB1                                                            <---------HSFB2a(2)         <-------GAMYB                                                                    --------->HSFB2a(2)        ------>ZmHOX2a(2)          --------->YAB1                     <<<<<<<<<TBF1       <---------LBD16        <---------MYB46(3)      --------->HSFB2a(2)             <<<<<<<<<TBF1       <---------ANAC58       <---------YAB1           <---------HSFB2a(2)          <<<<<<<<<TBF1          <---------ANAC58    <---------YAB1  --------->ARR14(2)                  <----------DOF2       ------>ZmHOX2a(2)    --------->ICU4 <---------GLK1(2)                <---------ZAT18<<<<<<<<<TBF1 <----------DOF2   ccggtgatgatcgttgaatgagaatctccattctctagaatagtctcgacttggttcactttcttcttcttcttcttcgatctctttcgtttcccgtagt  25487700                                    ------>ZmHOX2a(2)                                   <---------At4g35610                                  --------->ARR14(2)                                  <---------ARR14(2)                          <---------MYB52(1)   <---------DEAR3(1)                         --------->LBD16       ------>ZmHOX2a(2)                        --------->HSFB2a(2)  <---------ARR14(2)                        <---------HSFB2a(2)  --------->ARR14(2)                                ------                       <---------ANAC46 --------->ZAT2            <---------ICU4              <------                       <---------LBD16  <---------ZAT2           <---------YAB1             ---------                     <---------ARR14(2) --------->At4g35610    --------->YAB1  --------->At4g35610 -MYB52(1)           --------->ARR14(2) <---------At4g35610  ------->TEIL---------->DOF2<---------At4g35610 >LBD16          <-------TEIL     <---------AGP1         <---------TOE2(3)     <---------At4g35610   ctctaggtgattctgaagctacgtttccggtaattggatctgagctggatcggcgaattgatgtatcatcattctcaaaggagctgttttggctgagaat  25487800                         ------>ZmHOX2a(2)        --------->TOE2(2)                        <------ZmHOX2a(2)         --------->TOE1(2)                       <---------ARR14(2)        --------->ANAC58                       <-----------ARR10         --------->ANAC58                       --------->GLK1(2)         --------->ANAC46                       <---------AGP1          <---------DOF5.7(2)                       --------->ARR14(2)    --------->DOF5.7(2)                       --------->ARR11(3)   --------->TOE2(3)                                    ----    --------->YAB1     <---------ARR11(3)  <---------ANAC46                                --------->ANAC58   <---------ATHB12   <------ZmHOX2a(1)    --------->ANAC55(2)                             --------->ANAC58   <---------YAB1  --------->LBD16         <---------ANAC55(1)                          <-------TEIL --->GLK1(2)      --------->LBD16          <---------ANAC58                       --------->ARR14(2) ---GLK1(2)      <---------HSFB2a(2)       <---------ANAC55(2)                    <---------ARR14(2) -->ARR10        --------->HSFB2a(2)       <---------ANAC58             --------->CCA1(2)  --------->ANAC46   ctcaaatgatagttttcttcccgaggatctaatcgccattggattacgtaaacgtaagacgaagaaaaatggagagacgaagcgaatacatacacacaaa  25487900                                                            <---------ANAC58                                                            <---------ANAC58                                                       <---------MYB46(3)                                                      <---------WOX13(1)                                                     >>>>>>>>>ARR2                                                     <------------CBF                                                    --------->ATHB12        --------->ANAC55(2)                        <---------YAB1        --------->ANAC58                        --------->GLK1(2)                    --------->HSFB2a(2)        --------->ANAC58                       --------->ARR11(3)                    <---------HSFB2a(2)        --------->ANAC46                       <---------ARR11(3)     --------->ANAC58   --------->ARR14(2)      --------->CCA1(2) ----------->ARR10        --------->ANAC46        <------ ----->DAG2              *TSS               <------ZmHOX2a(1)         --------->ANAC58   --------->MYB52(1)   aattggattcacgaaatcgaaaaccagagagacggagacagagtaaggagattttgattgttgtttgtcgagacgcaaaacgctgttttggaaacggcgt  25488000                                                                       ------->MYC3                                                                       <-------MYC3                                                                       <-------MYC2                                                                       ------->PIF5                                                                       ------->MYC4                                                                       <-------MYC4                                                                       <-------PIF5                                                                       ------->MYC2                                                                      --------->ANAC55(2)                                                                      <---------O2                                                                      <---------ANAC55(2)                                                                      ======================bZIP_DOF                                                                      --------->O2                                                                      --------->TGA1a                                                                      <---------TGA1a                   <---------ANAC46                       --------->AHL20(2)                  <------NtERF2                           <---------AHL20(2)                --------->DEAR3(1)                       <---------ATHB12             <---------ANAC58                        ------->GAMYB    <---------ANAC46             <---------ANAC58                        ===========================MYC_MYB      ----------->HVH21                            -------->P         ======================bZIP_DOF     <-----------HVH21                             --------->ANAC58   <--------ABF1    <---------ANAC46                               --------->ANAC58 <---------ALFIN1    <---------ANAC58               ---------->DOF2 =============================MYC_MYB    <---------ANAC58            --------->YAB1 --------->ANAC58     <------------OsbHLH66    <---------ANAC55(1)   --------->ANAC58     --------->ANAC58   ------>NtERF2    --------->ANAC55(2)   --------->ANAC58   ===================================bZIP_DOF    <---------ANAC55(2)   --------->ZAT6     ---------->DOF2   --------->At4g35610   <-------TEIL <---------DEAR3(1) =============================================bZIP_DOF   <---------AHL20(2) ---ANAC46  <-------TEIL<-----------GT1  ----------->HVH21--------->YAB1         ---------->DOF2-----   ttagatgcgtgacatgcgtcgtcgtgtaacgctataaaaaagtctgacaaagcaacccaattatatgctgccacgtgttcttaaaaagcctcttaaattt  25488100                                        <---------DEAR3(2)          --------->At5g28300                                        <------MYB46(1)            ----------->GT1                                       --------->MYB59           --------->LBD16                                     <---------MYB52(1)        --------->MYB46(3)                                   <------MYB46(1)           ------>MYB46(1)                                   <---------MYB46(3)        <---------ARR14(2)   --------->ARR14(2)                                   <---------DEAR3(2)        --------->ARR14(2)   <---------MYB52(1)                                   <------MYB83<----------DOF2--------->SPL7 --------->ARR14(2)                                  <---------DEAR3(1)    --------->MYB52(1)   ------>MYB83  <---------ATHB12                           <---------ICU4    <------MYB46(1) ------>MYB83    ------>MYB46(1)                          --------->AHL20(2) <------MYB83  <---------MYB59   <---------ARR14(2)                          <---------ATHB51<---------MYB52(1) --------->MYB52(1)   <---------ARR14(2)                          <---------AHL20(2)--------->MYB59------->GAMYB    --------->WOX13(1) ----->DOF2               --------->ICU4<------MYB83   <---------GLK1(1)   --------->AtMYB61   aagcgattagtttagagtgactgagaaaataattagtcggttcggttcggtttagggataaccgaaccgcagtaaaaccaatccgataggccaataaaca  25488200                                                                <---------YAB1                        <------MYB83                            <---------TOE1(3)                        <------MYB46(1)                         <---------TOE2(3)                       --------->MYB59         --------->YAB1<---------MYB52(1)                   ---               --------->ATHB12      <---------ARR14(2)      --------->ARR14(2)                   <--            --------->ANAC55(2)      --------->ARR14(2)      <---------ARR14(2)         --------->ANAC46            <---------ANAC55(2)  <---------LBD16            <-------GAMYB             ----------->RAV1(1)   atgacagaaaaatcaagtgattagtttggttttgactcggaaacgggttttataatgcattcggttatggtttgattcgatttaaaacccacaaaatcga  25488300             ------>ZmHOX2a(1)            --------->TOE2(3)            --------->TOE2(2)                                                                     ---            --------->TOE1(2)                                                                  ------       <------ZmHOX2a(1)  --------->ZAT14                --------->DAG2            <---------ZAT2<--- ------>MYB46(3)          <---------ZAT14               ---------->DOF2            --------->At4g35610 ---------------AGL1  <-----------GT1         <---------YAB1    <-----------GT1    <---------At4g35610   accgatataggaatcctaagaggtttactatactggtttgctctcatggttattgtcaaaaagtttcaaccatgtttttgtagtaagctgctataacaca  25488400  Previous    Next  AGI:  At1g67960.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO42391.1); contains InterPro domain Protein of unknown function DUF747, CMV receptor (InterPro:IPR008010) Range:  from: 25484315    to: 25487925    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g67970.1    Description:  AT-HSFA8 (Arabidopsis thaliana heat shock transcription factor A8); DNA binding / transcription factor. Identical to Heat stress transcription factor A-8 (HSFA8) [Arabidopsis Thaliana] (GB:Q9S7U5); similar to HSF1 (ARABIDOPSIS HEAT SHOCK FACTOR 1), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G17750.1); similar to unknown [Populus trichocarpa] (GB:ABK95426.1); contains InterPro domain Winged helix repressor DNA-binding (InterPro:IPR011991); contains InterPro domain Heat shock factor (HSF)-type, DNA-binding; (InterPro:IPR000232) Range:  from: 25488362    to: 25490125    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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