Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                         --------->KAN4(2)                                                                                      <---------KAN4(1)                                                                                     <---------YAB1                                                                       --------->TOE2(3)                                                >>>>>>>>>>ABI3         --------->TOE1(3)<---------YAB1                                                >>>>>>>>>>FUS3  --------->TOE2(3)  <---------ICU4                                          <-----------GT1       --------->TOE1(3)  <--------ATHB1                                        <---------ANAC58     <-----------GT1       --------->ATHB12                              <---------ANAC55(2)        --------->AHL20(1)        --------->YAB1                              <---------ANAC58 --------->ANAC58----------->GT1    <---------ATHB12                              --------->ANAC55(2)     --------->AHL20(2)    --------->ANAC58                              <---------ANAC58 --------->AtLEC2<---------ANAC55(2)--------->ICU4                           <---------MYB52(1)  --------->ANAC58<---------ANAC46   <---------YAB1    -                  --------->ANAC58      <---------ANAC58 <---------AHL20(1) --------->ANAC58       -- <-----------GT1  --------->ANAC58 --------->YAB1     <---------AHL20(2)  ---------->DOF2  <---------   tttttacaatttttctaggtatgcaaaccattacttatcatgtcttaccatgcaaattatatattacgttaaacctaaaagccaatgattattctttaac  25470300                                                                     ------>MYB83 ----------->GT1                                                     ------>MYB46(1)   --------->AHL20(2) -------->DAG2          <-----------GT1                         --------->ZAT6   ----------->GT1 -------->DOF2  <---------AHL20(2)                         --------->YAB1 <------ZmHOX2a(1)        -- -DOF2  --------->GLK1(2)                                --------->AHL20(2)      --------->ALFIN1  --   aaaaagtaagaatttgaatttatgagttaccttgtagttattttgcaaaatcgacacataaaaataacaccaaataggaagaagtgtgaaaaaatatgga  25470400                                                   <------MYB46(1)                                                   <------MYB83                                                   ----------->GT1                                                  <---------MYB46(3)                                            --------->ALFIN1                                           ------->MYC2                                           ------->PIF4                                           ------->MYC4                                           <-------MYC4                                           <-------PIF4                                           <-------PIF5                                           ------->PIF5                                           <-------MYC2                                           --------->TOE1(2)                                           ------->MYC3                                           <-------MYC3                                          --------->O2                                          <---------O2                                          <---------TGA1a           <------ZmHOX2a(1)              --------->TGA1a              ----------->GT1     <---------ICU4                 --------->At4g35610            --------->ANAC46     --------->YAB1              --------->At4g35610               --------->ANAC58    --------->ICU4           <---------KAN4(2)    <---------AtMYB61--------->ANAC58            <-----    <---------ATHB12     <------NtERF2    ==============================bZIP_DOF     --------->MYB46(3) ------->ANAC58        --------->ALFIN1  ------------>OsbHLH66    --------->ZAT18   --------->ANAC58 ------->ANAC58 --------->CCA1(2)<---------At4g35610         <----------DOF2        --------->ANAC58   gaggcaatgatgaggaagatagaaggtggggaatgagcagaagcacgtgggattggtgattctctttgcacgctggtgaatagcctaagcaccatttctt  25470500                                                     <---------ICU4                                                    --------->ICU4                                                    <---------YAB1                                                 <---------AHL20(2)                                             --------->AHL20(2)                                             --------->YAB1 --------->AHL20(2)                                          <---------ICU4    <---------AHL20(2)                -------                                       --------->YAB1--------->YAB1                           <------                                      --------->AHL20(2)  <---------YAB1                      -------                                      <---------AHL20(2) <---------AHL20(2)               <---------AHL20(2)                                     --------->AHL20(2)<---------YAB1                    --------->AHL20(2)                              --------->ANAC58   <---------YAB1                          <---------AHL20(2)  --------->LBD16             --------->ANAC58  <---------AHL20(1)              ------>MYB46(1)     - --------->ANAC46             --------->ANAC46--------->AHL20(1)                ------>MYB83  <------ -----DOF2            --------->AHL20(2)  --------->YAB1 <---------AHL20(1)     -------->P--------->AHL20(2)   tacccccaaaaatacaaaacaaaataaaacaccagcaaaattaataataatattattattatttttatatcaacaaaatccctacctagaatttaataaa  25470600      --------->AHL20(2)    --------->YAB1  <---------AHL20(2)  --------->AHL20(2)                           --------->DAG2                                       - -->AHL20(2)                           --------->DAG2                                               < ---AHL20(2)                          ---------->DOF2                                  *TSS        -- -->AHL20(1)                     ---------->DOF2       ------>ZmHOX2a(2)         ------>ZmHOX2a(2) <- ---------->TBP          --------->ANAC58     ---------->DOF2                   --------->GLK1(1) <-- ---AHL20(1)             --------->ANAC58  ----------->GT1         <----------DOF2    <----------DOF2   atataaaaataaaaacttacataaaacaagaaaaacaaagaaaagttgtaaagtagatcgctctgttttcttttgttttctgatctctctttagtctttg  25470700                                                             --------->ARR11(3)    <------MYB46(1)                                          <---------ARR11(3)    <------MYB83                                         ---------->DOF2  <---------WOX13(1)      --------->HSFB2a(1)        <-------TEIL<-----------GT1 -------->ATHB12          <---------HSFB2a(1)       --------->CCA1(2) --------ATHB1       --------->LBD16               <---------ARR14(2)                <---------ANAC46 ------->ICU4       <---------HSFB2a(2)            --------->ARR14(2)             ------>ZmHOX2a(1) --------YAB1       --------->HSFB2a(2)            --------->ARR11(3)     ---------->DOF2         <-- -------WOX13(1)   <---------LBD16             ---------->DOF2--------->CCA1(2) ----------->RAV1(2)   aatgattggtgaagagtgttttctgggaacttgccttaagctatagctagaaagatacacaaagatatatccatctcaaagctcctgatgtgaagagtgt  25470800                                                      <---------ANAC58                                  <<<<<<<<<TBF1       <---------ANAC58        <----------------------                                <------------------------ANAC81     ----------->RAV1(1) -------MYB46(3)              <-----------GT1         <---------AtLEC2     <----------DOF2    <------   ttgttctgtttttctaatccaagtgagttttttttcttcttcattttctggtttttgcatgggaattgaacaacatactttgttatattttgttttcttt  25470900                            <---------bZIP60(2)                     <---------ANAC46                     <---------ANAC58                     <---------ANAC58                     <-------GAMYB                    <------MYB46(1)                   --------->MYB55(2)                   <---------MYB46(3)                  --------->ALFIN1                <---------ANAC46                                                             --------                <---------ANAC58              --------->YAB1                               <---------                <---------ANAC58           <---------At4g35610                          <----------DOF2               --------->MYB55(2)       <---------At4g35610                          <-----------GT1  <---------WOX13(1)<------MYB83        --------->At4g35610                     <----------DOF2 --ANAC81      <---------MYB46(3)     ------->TEIL <---------ZAT6            <---------ARR11(3) <---- ----DOF2   <----------DOF2 <---------ANAC46 <---------YAB1               <----------DOF2  <---------MYB46(3)   tgtgactgatggaactttgggtgggttgtgatgtgtaatgtatgctgatgatagtattatctaaaatttcaatcttctttatctttttttcttttgttgc  25471000                                                    <---------YAB1                                                    <---------AHL20(2)                                               <------ZmHOX2a(1)                                             --------->ANAC46                                             <---------TOE2(3)                                  <----                                       <---------ANAC58                <---------DAG2<---------ANAC46     <---------YAB1                    <---------ANAC46                <----------DOF2    <---------- -->ID1                            --------->ARR14(2)    --------->ATHB12           <------NtERF2 --RAV1(1) <----------DOF2         <---------ARR14(2)--------->ATHB12------->TEIL  <---------ZAT18 -----AtLEC2         <---------AtLEC2  <---------ANAC58<---------WOX13(1)      <-----------RAV1(1)   attgattttgattctttttgtttgtatgtccatatcagattgggtataaggaatttgattgaatggacatgaacttttcttctggtggcctctgtttttc  25471100                                      <---------MYB59                                    <---------ARR11(3)                                             --                            <---------ARR11(3)                                         ----------->GT1         <----------DOF2    --------->ARR11(3)                           --------->ARR14(2)        <-     <----------DOF2       <---------CCA1(2)                        --------->YAB1   ---------->DOF2 -----LBD16         <-----------GT1<---------CCA1(2)     <-----------HVH21   ------>ZmHOX2a(1)    --- --------------ANAC81    <---------CCA1(2)              --------->ANAC46 <---------ARR14(2)     -----   tgggtttctttcttttttttttttcccatatatctatatatctaactaaatcactcaccagtcaccacaatgacaaatcctctatagaaaagaaaaaaaa  25471200  Previous    Next  AGI:  At1g67900.1    Description:  phototropic-responsive NPH3 family protein. similar to phototropic-responsive NPH3 family protein [Arabidopsis thaliana] (TAIR:AT3G26490.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42521.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN63893.1); contains InterPro domain NPH3; (InterPro:IPR004249); contains InterPro domain BTB/POZ fold; (InterPro:IPR011333) Range:  from: 25470687    to: 25473680    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version