Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 ------>ZmHOX2a(2)                                                                              <------ZmHOX2a(2)                                                                             <---------ARR14(2)                                                                             --------->ARR11(3)                                                                             <---------ARR14(3)                                                                             <---------ARR11(3)                 ------->TEIL   <---------ANAC58                             --------->ARR14(3)                 --------->ARR11(3)                                          <---------AGP1   ----------->GT1              <---------ANAC58                             --------->AGP1  <---------TOE1(3)        <-----------RAV1(1)                               --------->ARR14(2)  <---------TOE2(3)  <---------YAB1                                      ---------->DOF2 ---------->DOF2<---------CCA1(2)             <---------ALFIN1 <---------MYB52(1)--------->AtLEC2   < ------ZAT6   <---------ANAC55(2)    <----------DOF2          <-------GAMYB----------->ARR10<-------- -DOF2        --------->ANAC55(2)<----------DOF2   <---------CCA1(2) <---------LBD16  <---------GLK1(2)   tgttaaagtaacaaatatgtatcttgattatgttgctttcttttagcaccatcttatcttcttccgttattttcggaaagatcttgcaaattcttgggtt  25441200                 <---------ANAC46                 <---------ANAC58                                                               <----                 <---------ANAC58                       ---------->DOF2           ----------->GT1 <---------AHL20(2)                   <----------ID1 --------->At5g28300         --------->DAG2 ----- ---------AHL20(2)                 --------->GLK1(2)----------->GT1             ---------->DOF2 <---- -TOE1(2) <---------AHL20(2)  ---------->DOF2 --------->AHL20(2)           ----------->GT1   <-------   tatttattgtatattttttgcttgttttgtagcaaagaatatgacaaattaaaacagtaaaagactctactacaattttgaaaaaagtgaaattgataga  25441300                                                                               --------->AHL20(2)                                                                            <---------ICU4                                                                            --------->YAB1                                                                            <--------HAHB4                                                                     <---------WOX13(1)                                                                  <---------AHL20(2)                                                     <------ZmHOX2a(1)     <---------YAB1           <                                                    ----------->GT1--------->ATHB12                 <  <----------DOF2                           <---------ZAT6        <---------YAB1      <---------ETT(2) -----ARR11(3)                          <---------ZAT14          --------->AHL20(2)   --------->ETT(2) ---->ARR11(3)         --------->AHL20(2)   ----------->GT1      <---------AHL20(2)  --------->DDF1 - -----GLK1(2)          <---------AHL20(2) ----------->GT1       --------->YAB1<---------YAB1        < --WOX13(1)   ----------->HVH21         --------->ZAT14--------->CCA1(2)   --------->ICU4  <---------   ttttctttgattcttcgtgacatattaaaaaatatcaaacagtatagtgtaaaaaggatacaagaattttaattggcatcattatatgtcgaccaagtac  25441400          ---------->DOF2      <---------ARR14(2)      --------->ARR14(2)   ------>ZmHOX2a(1)   --------->ANAC58  <---------DEAR3(2)                                                 --------->ANAC58   --------->ANAC46  <---------MYB46(3)                                                 --------->ANAC58   --------->ANAC58 <---------ANAC58                                                    --------->ANAC46  <---------LBD16   <---------ANAC46                       --------->ANAC46      --------->AHL20(2) ---------ETT(2)    --------->ETT(1)                       --------->ANAC58      --------->YAB1 ---------WRKY38(1) <---------ANAC58                <----------DOF2           --------->WOX13(1) -------->ETT(2)  <-----------HVH21            <---------ANAC58              --------------->AGL15 ---------WRKY12 <---------ANAC46              <---------ANAC58  <---------YAB1 <---------ATHB12 ------AtSPL3    <-----------RAV1(1) <-----------RAV1(1)   --------->ANAC58 ------------>CBF---------   ggtccacggattcaaagttgtgtcgggtcctatgaaattttgttgttgtgcttacttttacacgcttatgaatacttagccaattatatcaagacacaat  25441500                                                                                             --------                                                                                             --------                   <-------GAMYB            <---------AHL20(2)                             ------->TEIL                  ----------->GT1          <---------AHL20(2)                             <---------ALFIN1          <---------ANAC58                 --------->AHL20(2)  *TSS        <------------------------ANAC81          <---------ANAC58                 <---------AHL20(1) --------->ZAT2   <-----------GT1      <          <---------ANAC46                 --------->AHL20(1) <---------At4g35610        xxxxxxxxxxxx       --------->ALFIN1                   --------->AHL20(2)  --------->At4g35610  <<<<<<<<<TBF1    - --->CBF <------NtERF2        <---------AHL20(2)  <---------AtLEC2   <----------DOF2     <---------ZAT18   tctaaaacggtgtcgttttggggttaaaatttttaatctttgaaattaatttgtatgaagaagcagcttagctttctggtttttcttcttctgcacctta  25441600             --------->KAN4(2)            <---------HSFC1(2)            --------->HSFC1(2)    ------>MYB46(1)       <---------HSFB2a(2)        ------>MYB83       --------->HSFB2a(2)   ------>MYB83   --------->ANAC58          ------>MYB46(1)   --------->ANAC46        <---------MYB46(2)                                                  <-----   --------->ANAC58        --------->MYB46(3)------>MYB83                                     <------ ->TOE2(3)  --------->HSFB2a(1) <---------MYB59      <----------DOF2                  --------->HSFC1(1) ->TOE1(3)  <---------HSFB2a(1) --------->AtMYB61<----------DOF2                      <---------HSFC1(1) ---------ARR14(2)    <-----------HVH21   --------->DEAR3(2)     ---------->DOF2      --------->HSFB2a(2) xxxxxxxxxxx>smallRNA(si3) --------->AtMYB61 ------>MYB46(1)   <---------HSFB2a(2)    <---------HSFB2a(2) -------->ARR14(2)------>ZmHOX2a(1)  --------->AtMYB61         --------->HSFB2a(2)   <---------ANAC46   aatatacgcccagaaaattcctctggtcaccaaaccaaaccaaaaccgactctttctttgaatttctgaaaggaaacgataagggtttcgagaaaaatca  25441700                                                                                                  <--                                       --------->ARR14(2)                                    --------                                       <-----------ARR10                                 >>>>>>>>>MYB98                                       <---------ARR14(2)                       --------->ANAC55(2)                                    <---------ANAC58                            <---------ANAC55(2)                                    <---------ANAC46                           <---------LBD16  <---- <----------DOF2                    <---------ANAC58                         <------ZmHOX2a(2)  <---- <---------DAG2       --------->ARR14(2)                                    <-----------HVH21<------- ----ICU4             <---------ARR14(2)      <---------LBD16   --------->HSFB2a(2)     <-----------GT1 ---ATHB12  ---------->DOF2        ---------->ID1               <---------HSFB2a(2)    <-----------GT1   ttcctttttgacttaaaagacgcgtttccacatttttggcgtttcttctctgggtttgttttgtctctagacgaagacgatcacgggttttaacatattc  25441800           ------->TEIL          <---------CCA1(2)                                                  <---------ANAC58      <---------ANAC46                                         --------->ANAC58 --------->REM1(2)                                             --------->ANAC46 <---------SPL7                                                --------->ANAC58         <---------ZAT14 -------ANAC46             --------->ARR14(2)                 --------->SPL7 <---------ANAC58 ->ARR14(2)--------->ARR14(2)                               <---------SPL7   <---------ANAC46       < -----ANAC58               <---------ARR14(2)             <---------------AtSPL3        --------->ZAT14 -----ANAC58            <---------ANAC46                  <---------------AtSPL8     <<<<<<<<<TBF1  < --ARR14(2)<---------ARR14(2)                 <---------MYB52(1)         --------->ARR11(3)     <----   gtgtgtacgcgtgtatctccaattttgcgaatagggtttgaagtaatcgttttgtttgtgagggtacgaaacgattatctcgtgttcttcttcactggtt  25441900     ------>ZmHOX2a(2)               <---------MYB52(1)    <---------GLK1(1)              --------->MYB52(2)    --------->GLK1(1)           <---------GLK1(2)    <------ZmHOX2a(2)          --------->ZAT2   --------->ARR14(2)          <---------ZAT2   <---------ARR14(2)         <---------TOE2(2)   <---------AGP1             <---------TOE1(2)   <---------ARR11(3)        <-----------RAV1(2)   --------->ARR11(3)      ------>ZmHOX2a(2)                               <------ZmHOX2a(1)  ================================HOX2a_HOX2a   ---------->DOF2           ----------->GT1  <------ZmHOX2a(1)   <---------WOX13(1)    <---------YAB1         <---------ANAC58                <- ---------TOE2(3)   --------->ATHB12<-------GAMYB <---------TOE2(3)<---------ANAC58         <-------- ---------TOE1(3)  <---------YAB1 <-------TEIL <---------YAB1    <-----------GT1            <-------- ------DOF2    <----------DOF2--------->LBD16--------->YAB1 <----------DOF2--------->YAB1<-----------GT1   ttaaggatctcgttgtgctttctgattgatcccaggttcgttattgattataaaggtgattcctttttttcttgttaggataattctgttttcacttttg  25442000                                                             <---------------AtSPL8                                          ------->TEIL       --------->MYB59      --------->YAB1                                <-----------GT1              --------------->AtSPL8 --------AHL20(2)           --------->ARR11(3)               --------------->AtSPL3         --------- -DAG2                      <---------ARR11(3)            --------->ICU4       <----------DOF2 --DOF2                    <---------RVE1(1)           <---------YAB1  <-----------GT1    <<<<<<<<<<<   ttttattgagaaaatttggattatatgagagattttagcctatgcatttggagaattgtcattttggtaccatttacttctctttgatattgaaacattg  25442100  Previous    Next  AGI:  At1g67850.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G13000.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G13000.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42517.1); contains InterPro domain Protein of unknown function DUF707 (InterPro:IPR007877) Range:  from: 25441563    to: 25445805    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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