Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                           --------->LBD16      --------->ALFIN1                                         <---------LBD16     --------->LBD16                                       <---------LBD16      <---------ANAC58                                      ------>ZmHOX2a(2)     <---------ANAC46            <---------HSFB2a(2)                                     <------ZmHOX2a(2)      --------->DEAR3(1)          --------->HSFB2a(2)                                    <---------ARR14(3)      <---------ANAC58      ------->GAMYB                                    --------->ARR14(3)      <---------O2        ------>MYB83          <---------ANAC46          --------->ARR14(2)      <---------bZIP60(2) ------>MYB46(1)     <---------ANAC46               <---------ARR11(3)      --------->O2       --------->MYB52(1)    <---------TOE2(3)               <---------ARR14(2)      ==============================MYC_MYB ----------DOF2                     --------->ARR11(3)      <---------TGA1a   --------->AtMYB61 -->ARR14(2)   <---------ZAT6      --------->GLK1(1)       <------NtERF2     --------->MYB46(3) ---ARR14(2)   ----------->GT1     <---------GLK1(1)      --------->ZAT18    --------->DEAR3(2)   cactttgacgtagagtagagttaagagctcttatcggagatcccgcggtagcgaagttagcgccgtggctgaagtttgaaccaacggagtctagaaacgc  25436300                                                                                                    -                                                                                                    -                                                                                                  ---                                                                                                -----    --------->CCA1(2)                                             --------->ANAC58              <----   --------->ARR11(3)                     --------->ANAC58        --------->ANAC58              <----   --------->ARR11(1)            xxxxxxxxxxxxxxxx>smallRNA(i)     --------->ANAC46             <-----   <---------ARR14(2)     <---------MYB52(1)        --------->At4g35610                  <---------ZAT6 ----------->ARR10      --------->ANAC46  --------->ANAC58    ---------->DOF2      <XXXXXXXXXXXXXXXXX   gcttagatatggtaatccaagactctccgctatgttcaaaacagaagcaaaatcagcaaaaacaaaaaacgcaaacgttttggatagggaagagttagtg  25436400                                                 --------->At4g35610                                              --------->ALFIN1                                             <-----------HVH21                                           <---------MYB46(3)                                           --------->LBD16                                          <---------ANAC46                                        <---------ANAC46                                       <---------LBD16                          --------->ZAT2                                    <---------SPL7                         <------ZmHOX2a(1)                        --------->AtMYB61--------->LBD16           <-----------HVH21 -------->TOE2(2)      --------->MYB46(3)<---------LBD16          <---------ANAC46 -------->TOE1(2)    ------>NtERF2 <---------ANAC58               <---------ANAC58 ---->TEIL          --------->DEAR3(1)--------->SPL7              <---------O2  <---------ZAT2  <---- ---->ZAT18    <---------O2      <-----------ARR10                <---------ANAC58             ------ -----ZAT14    <---------bZIP60(2) <---------ANAC58               <---------TGA1a              <----- -----ZAT18 <---------ATHB12     <---------ARR14(2)               ==================================bZIP_DOF ----ZAT6   ----------->HVH21    --------->ARR14(2)--------->DEAR3(1)   <------ZmHOX2a(1)      <----- XXXMIR408  ----------->TGA1  <---------TOE1(2)  <---------At4g35610<---------MYB52(1)   ---------->DOF2   tacctatgaagtcaatgacgaggcgaccatcgcagtatcgtcccgcgggtgagccgaagaaggaagagccgtgaggaggaccagcttggccaaaagcagc  25436500         <---------DEAR3(2)        --------->ATERF1(2)       <---------LBD16                      <---------ANAC58     --------->DEAR3(1)                     <---------ANAC46         --------->ALFIN1    --------->DEAR3(2)                      <---------ANAC58        ------->MYC3 -----ANAC46--------->ARR14(2)         <---------ICU4               ------->MYC2           --------->ANAC58 --->At4g35610                         --------->ATHB12             <-------MYC2           --------->ANAC58 ----At4g35610                      ---------->DOF2                 <-------MYC3         ---------->DOF2 ----LBD16<---------MYB52(1)  ---------->DOF2              --------->ATHB12   <---------YAB1  -------   ggagagaccgccggtatcggagttagagtcaccaaagttaaagattgctgggaaatggcattgatgggcatgtgttgatggtgatagtgaagaaagcaaa  25436600                                                                       <---------O2                                                                       <---------ANAC55(2)                                                                       --------->ANAC46                                                                       --------->ANAC55(2)                                                                       --------->O2                                                                      <---------LBD16                             --------->ATHB12                        <-------------DYT1                    <------ZmHOX2a(1)             ---------->DOF2    ------------->DYT1 ---------->DOF2                 --------->CCA1(2)             ----------->GT1      <---------ATHB12 ------>ZmHOX2a(1)                <---------ARR14(2)   --------->DAG2               --------->WOX13(1)--------->TOE1(3)  ------------------------>ANAC81   ---------->DOF2  *TSS       ------------>CBF    --------->TOE2(3) --->DOF2---------->DOF2    <-------TEIL  ---------->DOF2 --------->AtMYB61  <----------DOF2   gagagagcaaacaaagaagataggattggattcattggtaaagctaaagatgtaaagagaccaaaactcaatcacgggacttttatcctcaaaagaagag  25436700                 ---------->DOF2            <---------------AGL15            <---------HSFB2a(2)            --------------->AGL15            --------->HSFB2a(2)           ----------------->AGL2           ----------------->AGL3           ----------------->AGL1                                                  --------->MYB52(2)          -------->P                                                               ----------->GT1          --------->MYB52(1)                                                   ----------->GT1          ------>MYB46(1)      <------MYB46(1)                                 <---------ZAT6          ------>MYB83         <------MYB83                                 --------->CCA1(2)<-------      --------------->AGL15  <--------P                                  <---------TOE2(3)--------->WOX13(1)     ----------------->AGL1<---------HSFB2a(1)                     <---------YAB1<--------P <--------  --------->DOF5.7(2)---------->DOF2                               <---------AHL20(2)   <---------YAB1   aaacgttacccctaccagaaaaagaaagaaggttggcaaaacacaaaaatcagagatttgtgatatgtttttattgagatagggttagttataaatcaat  25436800                                                                    --------->ARR14(2)                                                            <----------DOF2                                              <---------ARR14(2)    <---------ARR14(2)        <------   <---------YAB1                             --------->ARR14(2)    <---------GLK1(2)   <----------DOF2 --ICU4        --------->ANAC46        --------->YAB1   <----------DOF2          <-----------GT1 -ATHB12 <---------YAB1          <-----------GT1    <----------DOF2<------ZmHOX2a(1)<----------DOF2   acattttgaatatgtttacgaaaatacttgtaagtttaccatcatacaaatatgctttctttctttggaggattctcttcttatttctttctttttaagt  25436900                                               --------->ARR11(3)                                               <---------ARR11(3)                                              --------->GLK1(1)                                     <         <----------DOF2      <---------AHL20(1)                                                    <        <---------ANAC58 <---------AHL20(1)   <---------GLK1(1)                                     -        <---------ANAC58 <---------AHL20(2)  <---------ARR11(3)                                     -       <---------At4g35610    <---------AHL20(2)                                                    <       --------->At4g35610    --------->AHL20(2)           --------->AHL20(2)                      <-     <--------P          --------->AHL20(2)  --------->ARR11(3)                      <---------ANAC55(2) ---TOE2(3)        --------->YAB1     <-------GAMYB        <---------AHL20(2)        --------->ANAC55(2)   ttatatggtagctttccattttcatattttattttattttcgttgtagatatctagtttttttaatttgttgtctctattttctatcacgttttttttct  25437000             <----------DOF2        <---------ARR14(2)          <-----------GT1           --------->ARR14(2)         <---------CCA1(2)        --------->REM1(2)      <----------DOF2            <---------ANAC46 ---------ARR14(2)             <---------ANAC58                                                  <--- -----------ARR10              <---------ANAC58             --------->TOE2(3)              <---------AtMYB61 -------->ARR11(3)             <---------ANAC46          ----------->RAV1(1)             <---------ANAC58 -------->ARR14(2)   <---------AtLEC2             <---------YAB1            <---------MYB46(3)   <--- ---------ARR11(3)   <---------ANAC58          <---------YAB1   <---------TOE2(3)        <---------ANAC58 --------CCA1(2)     <---------ANAC58         <---------TOE1(2)--------->YAB1            <---------ANAC46   caaatcttcttttatctttttttgcatgagttgtcgtgtatacactctcacgattatcgcaacattaatgaaacagggttgtgagattgttgtgtggttt  25437100            <---------WOX13(1)            <---------ANAC58                                <---------WOX13(1)          --------->ATHB12                <---------ANAC58                              --------->ATHB12         <---------YAB1       --------->ATHB12                              <----------DOF2         --------->ICU4----------------->AGL1                        ---------->DOF2   <---------YAB1 ------ANAC58  <---------ANAC46         <---------YAB1      <---------At4g35610 <---------ANAC58 ------ANAC58 --------->ATHB12----------->GT1--------->ATHB12  ----------->GT1  <---------ANAC58   cgttcgtagagatgattgtttggattccaaaatggttgaaacatgcttgtttggatttgttcaactggttgaaaagggctttgcttcgtttgattggcta  25437200  Previous    Next  AGI:  At1g67830.1    Description:  ATFXG1 (ALPHA-FUCOSIDASE 1); alpha-L-fucosidase/ carboxylesterase. Identical to Alpha-L-fucosidase 3 precursor (FXG1) [Arabidopsis Thaliana] (GB:Q9FXE5;GB:Q681W5); similar to GDSL-motif lipase/hydrolase family protein [Arabidopsis thaliana] (TAIR:AT3G26430.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42511.1); contains InterPro domain Lipase, GDSL; (InterPro:IPR001087) Range:  from: 25435249    to: 25436653    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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