Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        ------>ZmHOX2a(2)                     <------ZmHOX2a(2)                     <---------GLK1(1)                     --------->GLK1(1)                    --------->ARR14(2)                    <-----------ARR10                    <---------ARR11(3)                    <---------ARR14(2)                    <---------AGP1                   <---------ARR14(1)                   <---------CCA1(2)                  --------->LBD16                 <---------HSFB2a(2)                                                      ---------->DOF2                 --------->HSFB2a(2)                                                   <---------HSFB2a(2)                <---------LBD16                            --------->TOE2(3)        <----------DOF2            =================HOX2a_HOX2a                   --------->TOE1(3)  <---------ANAC46            ------>ZmHOX2a(1)                      <---------At4g35610        <---------ANAC58         ---------->ID1                            --------->At4g35610        <---------ANAC58 -ARR11(3)  ================HOX2a_HOX2a      ---------->DOF2                 <---------LBD16  ------- >ARR11(3)  <----------DOF2     --------->LBD16   --------->GLK1(2)   <-----------GT1  --------->HSFB2a(2)   acaaaaccattgtccttttccggatctcattttccccagtacatggacaaagcatctgcaacctcaagagtttcacaatttcgggtctttcagaaagagt  25423400                                      --------->GLK1(2)                                     <---------GLK1(2)                                     <---------ARR14(2)                                     --------->ARR14(2)                                    --------->HSFB2a(1)                                    --------->GLK1(1)                                   ----------->ARR10        <---------ZAT6                            ----------->HVH21        --------->SPL7                           --------->TOE1(3)       <---------SPL7                           --------->TOE2(3)      <---------ANAC46                          ----------->RAV1(2)     <---------ANAC58                        <---------MYB46(3) ---->GT1    <------ZmHOX2a(1)--------->MYB52(1)  <---------ANAC58 <----------DOF2       --------->ALFIN1   ttatttgagaagaaaggatgatcagtttacctgaacggagattctgaagatagcgtatggtagtgtttcctttgagtcaaaaacttcaatggtggtgata  25423500                          --------->TOE2(3)                   --------->HSFC1(1)                   <---------HSFC1(1)                   --------->HSFB2a(2)                   <---------HSFB2a(2)          <---------At4g35610     <---------ZAT14         --------->GLK1(2)          --------->At4g35610---------->DOF2   --------->ATHB12        <----------DOF2             --      <-----------HVH21   --------->TOE1(3)   <---------YAB1--------->YAB1               --------->MYB52(1)   caattctctgtcagaagcggtctagaaacctgaaagtttagtggcattgttattggccagaatcaagacaactctttgaagaattggaccccaagggatg  25423600                                                                                    <---------HSFB2a(2)                                                                                    --------->HSFB2a(2)                                                                                  ----------->RAV1(2)                                                                            --------->MYB46(3)                                                                            ----------->HVH21                                                                            --------->DEAR3(1)                                                                           --------->At4g35610                                                                           <---------At4g35610                                                                           <------NtERF2     <---------ZAT18                                      <----------DOF2 <---------ATERF1(1)   <---------At4g35610                            ---------->DOF2     --------->ANAC58   --------->At4g35610  ---------->DOF2         --------->HSFB2a(2)   --------->ANAC58   <---------ICU4 ------->CCA1(2)  --------->HSFB2a(2)           <---------HSFB2a(2)   --------->ANAC46  <------ZmHOX2a(2)   gatatagctcacatcattttgcagaacaaagcttaagatggtttcgacttcttgaagcagcatttcggaatcaagccagcgaccgtctggatcatggcta  25423700                                               <------NtERF2                                              <-----------HVH21                                             <---------ANAC58                                             =================================MYC_MYB                                             <---------ANAC58                                             ================================MYC_MYB                                             ==============================================bZIP_DOF                                             --------->O2                                             <---------O2                                             <---------ANAC46                                             <---------TGA1a                 --------->HSFB2a(2)                                             --------->TGA1a                 <---------HSFB2a(2)                 --------->YAB1            <---------ANAC58           <-------GAMYB                <---------YAB1             <---------ANAC58          --------->MYB55(2)              --------->YAB1             <-----------HVH21           <---------MYB46(3)       --------->At4g35610              <---------REM1(1)   --------->At5g28300                    <-    --------->At4g35610          <---------ZAT14       <-------TEIL <--------P  ---------->DOF2    --    <---------At4g35610          --------->ZAT14    --------->GLK1(1)--------->MYB111(2)   <---------   cgaagtagctgctcaactatgatgtcttcattcagagcagagatgtcgcgtcggaaattcatggtaaatggttgttgttctaaaaagactctactttgaa  25423800                                                  --------->AHL20(1)                                                  <---------AHL20(1)                                        <---------ANAC58                                        <---------ANAC55(1)                                        --------->ANAC55(2)                                        <---------AtLEC2     <-----------GT1                    <---------ANAC58                       <---------MYB46(3)  ------->TEIL   --------->MYB52(1)     <---------ANAC46                     <------------CBF --------ANAC55(2)         ---------->ID1  ----------->GT1                   <---------GLK1(2)    <-- ------->ANAC55(2)     <----------DOF2  <---------ANAC55(2)              ---------->DOF2   <---------YAB1 -DOF2        --------->ANAC46 <----------DOF2 --------->AHL20(2) --------->LBD16    ------------>CBF   tatgtatttactaaacacaaaacagctttgtctctttggtttgcgtgataaaaatattagtagggtccctgaaactaaagattgttgagcaatatgactg  25423900                                                       <---------ALFIN1                          ----                                                  --------->GLK1(2)                <---------ANAC58                                                  <---------ARR11(3)               <---------ANAC46                                                  <---------ARR14(2)               --------->ANAC55(2)                                                  --------->ARR11(3)               <---------ANAC58--                                                  <-----------ARR10            <----------DOF2   <---                                  <----------DOF2 --------->ARR14(2)   ----------->GT1    ---------->DOF2                          <---------DAG2  <---------ARR14(2)         --------->ZAT14    <---------YAB1 -------GLK1(2)           <----------DOF2 --------->ARR14(2)    <---------YAB1 <---------DAG2    ----   gaatcttattcaaagacttgaaacatagctttatctctttttcagatttgaaaatctacacatcttatcactgtggtaatacttttcgtgatgaaagaca  25424000                                                                        --------->TOE2(3)                                                                       --------->ANAC46                                                                       --------->ANAC58                                                                       <---------ANAC55(2)                                                        --------->At4g35610                                                   --------->LBD16     --------->ANAC55(1)                                                  --------->LBD16      --------->ANAC55(2)                                                 <---------LBD16       --------->ANAC58                                               <---------SPL7         <-------TEIL                                               --------->ABI4(1)    <---------ARR14(2)                                               ------>NtERF2        --------->ARR14(2)                                            <---------At5g28300    <----------TaMYB80                         <---------ATHB12 <------ZmHOX2a(2)       ---------->TaMYB80            <---------LBD16              <---------ARR11(3)    ------->GAMYB ----->ANAC58      --------->ANAC58      <-----------ARR10  <-----------GT1 ------->ANAC46    --------->ANAC58      --------->ARR11(3) --------->MYB52(1)                    --- ------ALFIN1    <--------P             <------ZmHOX2a(1) <----------DOF2                   --------- ----->ANAC58<---------ANAC46 --------->ATHB12--------->DEAR3(1)--------->LBD16             <--------   cacactagatttattctgggtaagcaaatgaatgaatggagaggatcaccgcccggactgcttaaccgcatatacgtaaaactaatacaaacttgtggaa  25424100                              ------>ZmHOX2a(2)                                           ---------->DOF2                            --------->ARR14(2)                             <---------ARR14(2)                            <---------ARR14(2)                             --------->ARR14(2)                            --------->ARR11(3)                             --------->ARR11(3)                            <---------ARR11(3)                 ----------->GT1        --------->At5g28300    ---------->DOF2   <---------ARR14(2)                     ---------->DOF2        --------->ZAT6 -------->GT1         --------->ARR14(2)                  --------->ANAC58 <---------ARR11(3) >HSFB2a(2)   <---------ZAT18<------ZmHOX2a(2)            --------->ANAC58<---------CCA1(2)--------->DAG2 -HSFB2a(2) --------->At4g35610     <---------ICU4    ------------------------>ANAC81----------->GT1   gagtaagaaagaatagcagactcagattgggatcttgttcattactgagggaagaagaccaagaaaagtatatcgcatatattcttacagtaaaaagtga  25424200                                                               <---------ICU4                                                              <---------ATHB12                                                              <---------ATHB51                                                         --------->TOE2(3)                  ---------                                                       <-------TEIL                       --------->CCA1(2)                                                ------------>AtMYB77    --------->DOF5.7(2)<-------TEIL                                               --------->WRKY12--------->YAB1             --------->ARR14(1)                                               ----------->HVH21       <----------DOF2   <---------ARR14(2)                                               --------->WRKY38(1)  ------->TEIL         --------->ARR14(2)                                             <-------GAMYB    --------->ICU4--------->ANAC46---------                        <----------DOF2     <---------ANAC46--------->WOX13(1)           --------->ARR11(1)                <---------YAB1           <----------DOF2--------->REM1(1) <---------DOF5.7(2)   <---------YAB1--------->YAB1   <-----------GT1   <-------GAMYB<---------YAB1        ----------->ARR10   tcagtttgatagaaacctataatagcctttgtgtttttgccatctttcgttgacagttacatcaattatgaatctttaacgacagagaatagatacgacc  25424300  Previous    Next  AGI:  At1g67790.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G01670.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42481.1); contains domain PTHR13871:SF2 (PTHR13871:SF2); contains domain PTHR13871 (PTHR13871) Range:  from: 25421205    to: 25423762    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g67792.1    Description:  other RNA Range:  from: 25421272    to: 25423892    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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