Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       --------->CCA1(2)                    <---------ARR11(3)                             --------->ANAC58        --------->ANAC46                                           --------->ANAC58        --------->ANAC58                                           --------->ANAC46        <---------ANAC55(2)     --------------->AGL15    --------->TOE2(3)        --------->ANAC55(2)     <---------------AGL15    --------->YAB1        --------->ANAC55(1)     ======================================MADS_MADS        --------->ANAC58   ---------->DOF2              <---------ATHB12       <---------LBD16  ----------->GT1              <---------------AGL15     <---------ZAT2 --------->ARR11(3)               --------------->AGL15     --------->ZAT2 --------->ARR11(1)              ----------------->AGL1    <---------DAG2       --     <---------ZAT14<---------ARR14(2)              ----------------->AGL3    <----------DOF2    <---     --------->ZAT14--------->ARR14(2)       ---------->DOF2     --------->MYB46(3)   --------->TOE2(3)   atttctgagcacggaatatagagatatggtaaagcctataagagaaacaaagtttccaatcttagcaacaagcaaacaaacttttttttcttaaaacaag  25300000                                                                    --------->ARR14(2)                                                                    <---------ARR14(2)                                                                    <---------ARR11(3)                                                                   <---------GLK1(1)                                                                   --------->GLK1(1)                                                                   <---------CCA1(2)                                                                  <---------ARR14(2)                                                       <---------REM1(1)                                                       --------->ALFIN1--------->TOE1(3)                                                     --------->At4g35610------>ZmHOX2a(1)                                            ----------->HVH21  ----------->GT1                                 --------->ANAC58  <-----------RAV1(2) --------->TOE2(3)                                 --------->ANAC58 --------->ZAT2  --------->ARR14(2)       --------->AHL20(2)        --------->ANAC46 <---------ZAT2  ---------->TaMYB80          <------ --------->GT1            ------->TEIL    --------->At4g35610  <---------ANAC46              -------- ------ARR11(3)        <---------YAB1     <---------At4g35610 --------------->AtSPL3       <---------   atagtaaaattaaaactcttacacgatgaatgtgcaagcaagtcttctgaccagcaggtgtagagccgtatatccttataacagggacttcatttacctc  25300100                            ----------->GT1                  --------->MYB46(3)                           --------->ANAC46                ----------->RAV1(1)                            --------->ANAC58  --------->TOE1(3)         --------->YAB1                     --------->ANAC58  --------->TOE2(3)    --------->AHL20(2)                     <---------TOE2(3) ---MYB59    --------->ANAC58      --------->ANAC58          --------->MYB52(1) ->ANAC46    --------->ANAC58      --------->ANAC58        <---------MYB52(2) --GT1       --------->ANAC46  <-----------GT1     <----------DOF2   actaccttaaattcccagcaacaaatcaaatagtaacaagtcaaaaacttgccctttaacatctaacgaaactggagcattactctagtcaaaatttctg  25300200                                                                                      --------->YAB1                   --------->DAG2                                                    <---------YAB1                  --------->DAG2                                     --------->HSFC1(2)     ---------     --------->ATHB12        <----------DOF2                         <---------At4g35610    <--------    <---------ATHB12  <---------ANAC58                              --------->ANAC58--------->AHL20(1)    --------->MYB46(3)<---------ANAC58            --------->GLK1(2) --------->ANAC58--------->AHL20(2)  --------->WOX13(1)  <---------ANAC46   ---------->DOF2 <---------DAG2           --------->ICU4 <---------WRKY12---------->DOF2    ----------->GT1   <-----------GT1<---------HSFC1(2)  <-----------GT1   aagtcaaccattggattcaaaaaggcgtaagctttagaaagtataaagagagaattttgccttaccttggaagctactgtagcaaatattataaccaggg  25300300                                                                                                    <                                                                                                    -                                                                                              <------                                                                                             --------                                                                                             --------                                                                                             --------                                                                                           <---------                    --------->ATHB12          --------->ATHB12   --------->GLK1(2)     <---------MYB52(1)                <---------ICU4      --------->ZAT14       <---------ARR14(2)           ----------->HVH21                -------->HAHB4      <---------ZAT14       --------->ARR14(2)          --------->At5g28300     --------->ANAC58              <---------MYB52(1)   --------->LBD16               --------->LBD16     --------->ANAC58             --------->LBD16     <---------LBD16        <----------DOF2 -------- >TOE1(2)      --------->ICU4    --------->TOE2(3)  --------->ARR14(2)       <---------MYB46(3) <---- -LBD16   ----------->GT1        --------->ANAC46   <---------ARR14(2) --------------------->WRI1 ---   attggagaagccatgtaataatcgattgaaactatccgtaaactgaaaacattggaaccggattgagaatcagccatggctgtttcgccgtgactttgac  25300400                                                                            <---------ARR11(3)                                                                    <---------ANAC58     --------->ANAC58                                               <---------ANAC58     --------->ANAC58               --------->ARR14(2)              <---------ANAC46  --------->MYB46(3)                <---------ARR14(2)          --------->KAN4(2) ---------ARR14(2)                  --------->GLK1(2)          --------->HSFB2a(1) -------->ARR14(2)             --------->LBD16                 <---------KAN4(1)           ---------- ---WRKY18(1)         <------NtERF2<---------GLK1(2)           <---------HSFB2a(1)      --------->MYB52(1) ->WRKY45            <---------RAP2.3(1)                       --------->KAN4(1)        ------>MYB46(1) ->WRKY38(1)         ------>NtERF2 <---------ARR14(2)          <---------ICU4           ------>MYB83 --->HVH21<---------ICU4      --------->ANAC46                <------ZmHOX2a(2)        --------->MYB55(1) -DOF2    --------->YAB1     <---------LBD16                 <-----------ARR10       --------->MYB46(3) ->WRKY12--------->ICU4    --------->ARR14(2)               <---------ARR14(1)     <-----------GT1 -----LBD16 <---------YAB1 <---------ARR14(2)              --------->LBD16  --------->ARR11(3) ------>LBD16--------->ATHB12--------->MYB46(3)          <---------LBD16   <---------CCA1(2)---------   cggaaccacgaattatgatttggcgccagtacccgcagaatctgaaaccaaaaaatcaaaccggatcattccgttttaaatcttctaaccaaacggttat  25300500                                                                                        ------>NtERF2                                                                                       --------->DEAR3(1)                                                                                       --------->RAP2.3(3)                                                                                       --------->RAP2.3(2)                                                                                      --------->ERF1                                                                                      --------->ATERF1(1)                                                                                      --------->ORA47(2)                                                                                      <------NtERF2                                                                                      --------->DEAR4(2)                                                                                      --------->RAP2.3(1)                                                                                     <---------ATERF1(1)                                                                                     ------>NtERF2                                                                                     <---------RRTF1(1)                                                                                     <---------RAP2.3(1)                                                                                    --------->O2                                                                                    <---------DEAR3(1)                                                                                    --------->DEAR3(1)                                                                                    <---------O2                                                                                    --------->ANAC58                                                                                    --------->bZIP60(1)                                                                                    <---------bZIP60(1)                                                                                    --------->ANAC46                                                                                   --------->ATERF1(1)                                                                                  <---------ATERF1(1)                                                                                  ------>NtERF2                                                                                 ----------->HVH21                                                                               --------->ANAC46                                                                               ------->GAMYB                                                                              --------->MYB46(3)                                                                              <------------AtMYB77                                                                            ------>MYB46(1)                                                                            --------->MYB52(1)                                                                            ------>MYB83<---------ATERF1(1)                             --------------------->WRI1                    ----------->HVH21                       <---------MYB46(3)                                  --------->MYB55(1)                      --------->ALFIN1                                    <---------MYB111(2)     <-------TEIL   <---------TGA1a                                       <---------MYB59----------->RAV1(2)  <------MYB83      <---------bZIP60(2)                                   --------->AtMYB61  <---------DEAR3(2)<---------ANAC58                                      <---------MYB52(2)  <------MYB46(1)   <---------ANAC46                                      <---------MYB46(2) --------->MYB59    <---------O2                    <---------ANAC58      <---------MYB111(1) ->GT1              --------->O2                    <---------ANAC58     --------->ANAC46<------NtERF2 >At5g28300         <---------ANAC58                <---------ANAC46--------->ANAC46--------->ANAC58   agttcggttcattttgtttaagacgtggttaccttcagtgaatcgctctctcttgcttgtagtttcttctactctacctaaccgcgacgccgcctgagtt  25300600                                 <---------DREB2C(2)                                <---------ANAC58                                <---------ANAC46                                <---------ANAC58                       --------->AHL20(2)                     ----------->RAV1(1)                         ------->GAMYB                <------                     ------>NtERF2--------->LBD16             ----------->RAV1(1)             <------               <---------MYB52(1)<---------DEAR3(1)          <----------ID1                  --------          <-----------GT1 <---------TOE2(3)                --------->ANAC58     <---------ZAT18          --------->MYB52(1)    <---------LBD16            --------->ANAC58 --------->ATHB12 <-------   --------->ZAT2   <---------ETT(1)              --------->DAG2<---------MYB52(2)           --------   <---------At4g35610  ---------->DOF2          ---------->DOF2--------->MYB46(3)<---------PCF2   <---------ZAT2   --------->ANAC46----------->GT1      ---------->DOF2<---------AHL20(2)   <-------  --------->ANAC46  ----------->HVH21      ----------->GT1--------->DAG2--------->AHL20(2)  ---------   atcccagctacttaaccgttctccgacaaaggttgccggtgtaaaatgtcaaaaagcagaaaagcaacaaacatttaattagtgggcctgataaatataa  25300700      --------->TOE2(3)      >>>>>>>>>RAP2.2   --------->WOX13(1)      <---------YAB1 ---YAB1           <-----------GT1 ---AHL20(2)  <---------YAB1  <----------DOF2 ->AHL20(2)   <---------AHL20(2)                                     ----------->GT1 --AHL20(1)   --------->AHL20(2)                                ----------->HVH21 ->AHL20(1)  <---------AHL20(2)                      --------->AHL20(2)  --------->AHL20(2) --AHL20(2)  --------->AHL20(2)             <---------At5g28300<-----------HVH21          <---------ARR14(2) >YAB1--------->YAB1    <---------MYB52(1) <-----------GT1 --------->GLK1(2)              --------->ARR14(2)   tgggccaatctaaattttaattatccattatgcttttttgaaaatttaccccaagttaaatattctgtgacccgtttaaatctaaaaacccaaatccaca  25300800                                                                    <---------ARR11(3)                                                                    --------->ARR14(2)                                                         ================================HOX2a_HOX2a                                                         ------>ZmHOX2a(2)                                                        <------ZmHOX2a(2)                                                        =================================HOX2a_HOX2a                                                       <---------ARR14(2)                                                 --------->CCA1(2)  --------->ARR11(3)                                                --------->ARR11(3)  ------->TEIL                                                <---------ARR11(3)  <---------ARR14(2)                                    <------MYB83<---------ARR14(2) <---------CCA1(2)  --------->ANAC58                                    <------MYB46(1)    <---------ARR11(3)             --------->ANAC58                                    --------->HSFB2a(1)--------->ARR14(2)         <------ZmHOX2a(1)<-                --------->DAG2      --------->HSFC1(2) --------->AGP1            <----------ID1    --               ---------->DOF2      <---------HSFB2a(1)--------->ARR11(3)    ------->GAMYB        <--             --------->YAB1         <---------HSFC1(2) <---------AGP1      <---------At4g35610------- <---------AtLEC2                   <---------MYB46(3)<---------CCA1(2)    --------->At4g35610<------   tttgcataaactctatgaaaagcgaaatttcaaatggatggttcttggaagatattagatcttgtatgtgtatcttcaactgaaggacaagacaagtgcc  25300900  Previous    Next  AGI:  At1g67500.1    Description:  ATREV3 (Arabidopsis thaliana recovery protein 3); DNA binding. similar to EMB2780 (EMBRYO DEFECTIVE 2780), DNA-directed DNA polymerase [Arabidopsis thaliana] (TAIR:AT5G63960.1); similar to hypothetical protein OsI_026309 [Oryza sativa (indica cultivar-group)] (GB:EAZ05077.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17591.1); similar to DNA polymerase zeta [Chlamydomonas reinhardtii] (GB:XP_001694423.1); contains InterPro domain Polynucleotidyl transferase, Ribonuclease H fold; (InterPro:IPR012337); contains InterPro domain DNA-directed DNA polymerase, family B, conserved region; (InterPro:IPR006134); contains InterPro domai Range:  from: 25291370    to: 25300377    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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