Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                   --------->AHL20(2)                                                                                 <---------AHL20(2)                                                                             --------->AHL20(2)                                                                             --------->YAB1                                                                             <---------AHL20(2)                                                                          --------->YAB1                                           ----------->GT1                <---------ICU4                                          --------->ICU4                 <---------ATHB51                                       <---------AHL20(2)                --------->ICU4                                    ------->TEIL                         <---------AHL20(2)                                <---------TOE2(3)                -------->P <---------YAB1       <---                             --------->AHL20(2)         <------ZmHOX2a(1)--------->AHL20(2)   <------ -----TOE2(3)                <---------AHL20(2)       <---------TOE1(2)--------->YAB1<---------AHL20(2)   gaatacaaatttagttttagaattttaaaattttaatgtatgtaattgtgaaattgtaggattaatctaccaaaaataattatatatataaaaaatatga  25279600                                                                             <---------YAB1                                                                            <---------AHL20(1)                                                                            <---------AHL20(2)                                       <---------ARR14(2)                 <---------AHL20(2)                                       --------->GLK1(2)                  <---------YAB1            --------->TOE2(3)          --------->ARR14(2)                <---------AHL20(1)            --------->TOE1(3)    <----------ID1                        <---------AHL20(2)     ----------->GT1      --------->AHL20(2)                          --------->YAB1 --------------AGL1   --------->AHL20(2)                             <---------AHL20(2)           --- ---YAB1    <----------DOF2--------->AHL20(2)                  ----------->GT1                    <--   tcaaaaatggtaaactttaacaaaaaaaataaaaaatgacaaatctggacaaaaattagtttatgcagtatataatattatttttgtagcaaaaacatgt  25279700                                                                                              -------                                                                                           <---------O2                                                                                           <---------TGA1a          <---------ANAC58                                                                 --------->O2          <-------GAMYB                                                                    <---------ANAC58          <---------ANAC58                                                                 <---------ANAC58         <---------MYB46(3)                                                             ----------->HVH21      <---------ANAC58                     --------->ARR14(2)                        --------->ATHB12      <---------ANAC58          <---------ANAC58                             --------->ATHB12-------- ------------------>WRI1        <---------ANAC58           ----------->GT1<------ZmHOX2a(1)<---------bZIP60(2) --------DOF2       <------ZmHOX2a(2)      <---------ARR14(2)<---------ZAT6 <---------YAB1 <---------ANAC46   ctttgttttcttggttgtctcgatcaaaaacatgtcttgagagcatatatgaatactaatatagtattaaactataggatgatggggtcattgacgtggt  25279800                                                                                              ------>ZmHOX2a(2)                                                                                             <<<<<<<<                                                                                             <------ZmHOX2a(2)                                                                                             <<<<<<<<                                                                                             <<<<<<<<                                                                                             <-------                                                                                             <<<<<<<<                                                                                            ---------                                                                                            <--------                            <---------YAB1                                            <---------ICU4                          --------->CCA1(2)                                           --------->ATHB12                         --------->AGP1                                               <--------HAHB4                         <---------AGP1                                               --------->ATHB51                         <---------ARR14(2)                                          <---------YAB1                         --------->ARR14(2)                                          --------->ICU4                      --------->SPL7                                              ----------------->AGL3                     <---------MYB52(1)                                           ----------------->AGL2                    --------->At5g28300                                           <---------YAB1                 <---------At5g28300                             <---------AHL20(2)--------------->AGL15                <-----------GT1                      ----------->HVH21            <-----------------AGL2               <---------YAB1                      <---------At4g35610     ------>ZmHOX2a(1)<--------             --------->YAB1------>ZmHOX2a(2)       ----------->RAV1(2)     ==========================HOX2a_HOX2a            <---------YAB1<------ZmHOX2a(2)        --------->At4g35610     =========================HOX2a_HOX2a          <---------ICU4 <---------ARR11(3)       --------->GLK1(2)  <---------AHL20(2)    <---------CCA1(2) ---->GT1--------->ICU4  --------->ARR11(3)   --------->TOE2(3)  --------->AHL20(2)<---------------AGL15 ->ALFIN1<---------YAB1----------->ARR10 <---------AHL20(2)     --------->AHL20(2)<-----------------AGL3   gactagttgacattattatcaccgtaagatctgattgtgctatataatccctaatctgacgctccatttatttattcctccattaccattattagatctc  25279900     <----------DOF2 <GATA-3                                 ------>MYB83 <GATA-2                  --------->ARR11(3)    --------->ANAC46 <GATA-4                  <-----------GT1------>MYB46(1) --GLK1(1)           <---------AHL20(1)<---------MYB111(1) <GATA-1             --------->AHL20(1)<---------MYB111(2) --------->At4g35610       ---------->DOF2 >ARR11(3)          --------->YAB1     <---------ALFIN1   *TSS--------->At4g35610<----------ID1 -AGP1   <----------DOF2  <---------ARR11(3)    --------->ANAC58                --------->DEAR3(2) -ARR11(3)      <<<<<<<<<WRKY18 <----------DOF2 --------->ANAC58             ---------->DOF2    -----   tctgtctctttctttctgtcaaaaatattatcttctttgcaccaacttcaacgcattacgaagcagaagacagaacccaaaaaccgacaaagttccccta  25280000                                                                                       <-----------GT1                                                                                      <-----------GT1                                                                     --------------->AGL15                                                                     <---------------AGL15                                                                    <-----------------AGL2       ----                                                                    <-----------------AG         ----                                  --------->LBD16                   ----------------->AG<-----------GT1                     <---------ARR11(3)      <----------DOF2        <-----------------AGL1       ----                  <----------DOF2 ------>NtERF2                 <----------DOF2    <---------ARR11(3)            --------->TOE2(3)    --------->ANAC46            <---------ARR11(3)    --------->ARR11(3)         <-----------GT1   <----------DOF2<-----------GT1    --------->ARR11(3)    <---------GLK1(2) ---->ARR14(2)   <---------ICU4 <---------LBD16   <----------DOF2 <-----------GT1----------->ARR10 --   ttctctcggtataacctcatctttatcttctttctccgccattttctcttttctttgtataaatgtctttacccattttggattagattttccccctcca  25280100          <---------At4g35610          --------->At4g35610          ----------->RAV1(2)         ----------------------->TaNAC69(2)                                                         -        --------->YAB1                                                                              -      ------->TEIL                                                                                  - ----->ANAC58                           ------>ZmHOX2a(1)                                       ----- ----->ANAC46                    <---------GLK1(2)                                    <----------DOF2 ----->ANAC58                  <---------ATHB12         ------>ZmHOX2a(1)     ---------->ID1    ----- ------->AHL20(2)       --------->GLK1(1)            ------>ZmHOX2a(1)<---------TOE2(3)       <------   agtaaatgaatcatctgcttcttcaggtctccattgattctcctactctgttttcctcctatatttgtatttgatgttttgtttttttctttggaaccaa  25280200                          ------>ZmHOX2a(2)                         <------ZmHOX2a(2)                        --------->ARR11(3)                        --------->ARR14(3)                        <---------ARR11(3)       --------->DAG2   --------->AGP1      ---------->DOF2   <---------ARR14(3) -------->ANAC46        --------->ARR14(2)                 <---------ANAC58                       <-- -------->ANAC58        <---------ARR14(2)                 <---------ANAC58                       --- -------->ANAC58  <----------DOF2                      <<<<<<<<<MYB2                              --- ->MYB46(1)      ------>ZmHOX2a(2)                   <------MYB46(1)                              <-- ->MYB83       --------->ARR11(3)                    <------MYB83                                 <-- ---MYB59      <---------ARR11(3)               <---------ZAT6   --------->YAB1   --------->GLK1(1)   acaagtcataaagtttcgatctttgagatcttgcccaattcttggaactagtgtttggttttcttgataatatttctgtgagagaattcttcaattttca  25280300                                   <---------AHL20(2)                                --------->AHL20(2)                                --------->AHL20(1)                                <---------AHL20(2)                               --------->AHL20(2)                               --------->ICU4                               <---------AHL20(2)                               <---------ATHB51                         <---------TOE2(3)          <---------TOE2(3)<------ZmHOX2a(1)   <---------ANAC58  <----------DOF2   <---------ANAC58<---------------AGL15 -------ARR11(3)   --------------->AGL15                                          <---------ANAC46 ------>ARR11(3)  <-----------------AGL3                                          <---------ANAC58 ------>ARR14(2)  <-----------------AG <-----------GT1                            <---------ANAC58 -------GLK1(2)   <-----------------AGL1                                     <-----------RAV1(1) -------ARR14(2)  <-----------------AGL2    --------->AtLEC2      <----------DOF2<---------MYB46(3)   gattttcttgataatgttttgctcttttaggaaataatttatagccattcagatttattctcttgtttctttgtggtatatggtgcttgtaattttgcaa  25280400                                                                                   <---------AHL20(1)                                                                                   --------->AHL20(1)               <----------DOF2                                                   --------->ARR11(3)           <---------CCA1(2)                                                     <---------AHL20(1)        --------->ANAC58                                                         --------->AHL20(1)        --------->ANAC58          <---------YAB1                              --------->AHL20(2)       --------->ZAT18           ------>ZmHOX2a(2)                            <---------AHL20(2)  <--      <---------ALFIN1         <---------ARR11(3)              --------->WRKY38(1) --------->ARR11(3)     <---------ZAT18           --------->ARR11(3)              --------->WRKY12  <---------ARR11(3)     <---------At4g35610 <---------TOE2(3)          <----------DOF2     ----------->GT1          <---   aatttggagcaccctatctttttgtttgatgttgatcttattggttcttgacttctttcaaagagttgacttatctgtaaaaaaatattttgcagaaaat  25280500  Previous    Next  AGI:  At1g67480.1    Description:  kelch repeat-containing F-box family protein. Identical to F-box/Kelch-repeat protein At1g67480 [Arabidopsis Thaliana] (GB:Q9CAG8;GB:O64797); similar to kelch repeat-containing F-box family protein [Arabidopsis thaliana] (TAIR:AT1G27420.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66196.1); contains InterPro domain Kelch repeat type 1 (InterPro:IPR006652); contains InterPro domain Kelch-type beta propeller (InterPro:IPR015915); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain Kelch related (InterPro:IPR013089); contains InterPro domain Galactose oxidase/kelch, beta-propeller (InterPro Range:  from: 25279958    to: 25282381    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version